RNA–Protein interactions for RNA: ENST00000550236.1

ATXN2-220, Transcript of ataxin 2, humanhuman

TSL 5

Gene ATXN2, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-220ENST00000550236 PTCH1Q13635 1447 aa12.17□□□□□ -0.46
ATXN2-220ENST00000550236 YTHDC2Q9H6S0 1430 aaKnown RBP12.17□□□□□ -0.46
ATXN2-220ENST00000550236 LRPPRCP42704 1394 aaKnown RBP12.17□□□□□ -0.46
ATXN2-220ENST00000550236 TRAK1Q9UPV9 953 aa12.16□□□□□ -0.46
ATXN2-220ENST00000550236 KNDC1Q76NI1 1749 aa12.16□□□□□ -0.46
ATXN2-220ENST00000550236 MYOM2P54296 1465 aa12.15□□□□□ -0.46
ATXN2-220ENST00000550236 DCCP43146 1447 aa12.15□□□□□ -0.46
ATXN2-220ENST00000550236 NEUROD1Q13562 356 aa12.15□□□□□ -0.46
ATXN2-220ENST00000550236 ESCO1Q5FWF5 840 aa12.15□□□□□ -0.46
ATXN2-220ENST00000550236 SIN3AQ96ST3 1273 aa12.15□□□□□ -0.46
ATXN2-220ENST00000550236 DHX57Q6P158 1386 aaKnown RBP12.15□□□□□ -0.46
ATXN2-220ENST00000550236 JCADQ9P266 1359 aa12.15□□□□□ -0.46
ATXN2-220ENST00000550236 AHDC1Q5TGY3 1603 aaPredicted RBP12.15□□□□□ -0.47
ATXN2-220ENST00000550236 C1orf167Q5SNV9 1468 aa12.14□□□□□ -0.47
ATXN2-220ENST00000550236 XPCQ01831 940 aaPredicted RBP12.14□□□□□ -0.47
ATXN2-220ENST00000550236 MEX3CQ5U5Q3 659 aaKnown RBP12.14□□□□□ -0.47
ATXN2-220ENST00000550236 PRAM1Q96QH2 718 aa12.14□□□□□ -0.47
ATXN2-220ENST00000550236 POGKQ9P215 609 aa12.14□□□□□ -0.47
ATXN2-220ENST00000550236 RGS17Q9UGC6 210 aaPredicted RBP12.14□□□□□ -0.47
ATXN2-220ENST00000550236 LAMC1P11047 1609 aa12.14□□□□□ -0.47
ATXN2-220ENST00000550236 NHSL1Q5SYE7 1610 aa12.14□□□□□ -0.47
ATXN2-220ENST00000550236 NRXN1Q9ULB1 1477 aa12.14□□□□□ -0.47
ATXN2-220ENST00000550236 ABCC11Q96J66 1382 aa12.13□□□□□ -0.47
ATXN2-220ENST00000550236 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
ATXN2-220ENST00000550236 HIRIP3Q9BW71 556 aaPredicted RBP12.12□□□□□ -0.47
ATXN2-220ENST00000550236 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
ATXN2-220ENST00000550236 POTEAQ6S8J7 498 aa12.11□□□□□ -0.47
ATXN2-220ENST00000550236 FMN2Q9NZ56 1722 aa12.11□□□□□ -0.47
ATXN2-220ENST00000550236 LRP6O75581 1613 aa12.11□□□□□ -0.47
ATXN2-220ENST00000550236 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
ATXN2-220ENST00000550236 SOCS7O14512 581 aa12.1□□□□□ -0.47
ATXN2-220ENST00000550236 FOXO3O43524 673 aa12.1□□□□□ -0.47
ATXN2-220ENST00000550236 TECPR2O15040 1411 aa12.1□□□□□ -0.47
ATXN2-220ENST00000550236 PRAG1Q86YV5 1406 aa12.1□□□□□ -0.47
ATXN2-220ENST00000550236 CDC42BPGQ6DT37 1551 aa12.09□□□□□ -0.47
ATXN2-220ENST00000550236 TRIM26Q12899 539 aaPredicted RBP12.09□□□□□ -0.47
ATXN2-220ENST00000550236 LRRC59Q96AG4 307 aaKnown RBP12.09□□□□□ -0.47
ATXN2-220ENST00000550236 NBPF1Q3BBV0 1214 aa12.08□□□□□ -0.48
ATXN2-220ENST00000550236 ADGRB1O14514 1584 aa12.08□□□□□ -0.48
ATXN2-220ENST00000550236 ADAMTS2O95450 1211 aa12.07□□□□□ -0.48
ATXN2-220ENST00000550236 PMFBP1Q8TBY8 1022 aa12.07□□□□□ -0.48
ATXN2-220ENST00000550236 L3MBTL2Q969R5 705 aa12.07□□□□□ -0.48
ATXN2-220ENST00000550236 SPATA31A6Q5VVP1 1343 aa12.07□□□□□ -0.48
ATXN2-220ENST00000550236 ARHGEF28Q8N1W1 1705 aaKnown RBP12.06□□□□□ -0.48
ATXN2-220ENST00000550236 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
ATXN2-220ENST00000550236 PNPLA6Q8IY17 1366 aa12.05□□□□□ -0.48
ATXN2-220ENST00000550236 C8orf37Q96NL8 207 aa12.05□□□□□ -0.48
ATXN2-220ENST00000550236 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
ATXN2-220ENST00000550236 LMOD2Q6P5Q4 547 aa12.04□□□□□ -0.48
ATXN2-220ENST00000550236 KRT28Q7Z3Y7 464 aa12.04□□□□□ -0.48
ATXN2-220ENST00000550236 DLC1Q96QB1 1528 aa12.04□□□□□ -0.48
ATXN2-220ENST00000550236 SOS2Q07890 1332 aaPredicted RBP12.04□□□□□ -0.48
ATXN2-220ENST00000550236 USP32Q8NFA0 1604 aa12.04□□□□□ -0.48
ATXN2-220ENST00000550236 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
ATXN2-220ENST00000550236 PHF8Q9UPP1 1060 aa12.03□□□□□ -0.48
ATXN2-220ENST00000550236 NPHP3Q7Z494 1330 aa12.03□□□□□ -0.48
ATXN2-220ENST00000550236 PSME1Q06323 249 aa12.02□□□□□ -0.49
ATXN2-220ENST00000550236 NGLY1Q96IV0 654 aa12.02□□□□□ -0.49
ATXN2-220ENST00000550236 AFF2P51816 1311 aa12.02□□□□□ -0.49
ATXN2-220ENST00000550236 KIAA1210Q9ULL0 1709 aa12.02□□□□□ -0.49
ATXN2-220ENST00000550236 PXDNQ92626 1479 aa12.02□□□□□ -0.49
ATXN2-220ENST00000550236 KIF1AQ12756 1690 aa12.01□□□□□ -0.49
ATXN2-220ENST00000550236 HOXD11P31277 338 aaPredicted RBP12.01□□□□□ -0.49
ATXN2-220ENST00000550236 PRR36Q9H6K5 1346 aa12.01□□□□□ -0.49
ATXN2-220ENST00000550236 WASLO00401 505 aaPredicted RBP12□□□□□ -0.49
ATXN2-220ENST00000550236 CABLES1Q8TDN4 633 aa12□□□□□ -0.49
ATXN2-220ENST00000550236 ZNF772Q68DY9 489 aaPredicted RBP11.99□□□□□ -0.49
ATXN2-220ENST00000550236 CDK19Q9BWU1 502 aa11.99□□□□□ -0.49
ATXN2-220ENST00000550236 TRPM1Q7Z4N2 1603 aa11.98□□□□□ -0.49
ATXN2-220ENST00000550236 ADGRB2O60241 1585 aa11.98□□□□□ -0.49
ATXN2-220ENST00000550236 HAP1P54257 671 aaPredicted RBP11.98□□□□□ -0.49
ATXN2-220ENST00000550236 NBPF8Q3BBV2 869 aa11.98□□□□□ -0.49
ATXN2-220ENST00000550236 PCGF6Q9BYE7 350 aa11.98□□□□□ -0.49
ATXN2-220ENST00000550236 MARF1Q9Y4F3 1742 aaKnown RBP11.97□□□□□ -0.49
ATXN2-220ENST00000550236 QRICH2Q9H0J4 1663 aa11.97□□□□□ -0.49
ATXN2-220ENST00000550236 SPATA31A3Q5VYP0 1347 aa11.97□□□□□ -0.49
ATXN2-220ENST00000550236 PAK3O75914 559 aaPredicted RBP11.97□□□□□ -0.49
ATXN2-220ENST00000550236 NGDNQ8NEJ9 315 aaKnown RBP11.97□□□□□ -0.49
ATXN2-220ENST00000550236 NUDT16Q96DE0 195 aaKnown RBP11.97□□□□□ -0.49
ATXN2-220ENST00000550236 QTRT2Q9H974 415 aaKnown RBP11.97□□□□□ -0.49
ATXN2-220ENST00000550236 COL22A1Q8NFW1 1626 aaPredicted RBP11.97□□□□□ -0.49
ATXN2-220ENST00000550236 RXRBP28702 533 aa11.96□□□□□ -0.49
ATXN2-220ENST00000550236 TULP4Q9NRJ4 1543 aa11.96□□□□□ -0.5
ATXN2-220ENST00000550236 SRPK2P78362 688 aaKnown RBP11.95□□□□□ -0.5
ATXN2-220ENST00000550236 CABP2Q9NPB3 220 aa11.95□□□□□ -0.5
ATXN2-220ENST00000550236 USP21Q9UK80 565 aa11.95□□□□□ -0.5
ATXN2-220ENST00000550236 ANKARQ7Z5J8 1434 aa11.94□□□□□ -0.5
ATXN2-220ENST00000550236 ITSN1Q15811 1721 aa11.94□□□□□ -0.5
ATXN2-220ENST00000550236 ROCK2O75116 1388 aaKnown RBP11.94□□□□□ -0.5
ATXN2-220ENST00000550236 TONSLQ96HA7 1378 aa11.94□□□□□ -0.5
ATXN2-220ENST00000550236 CENPJQ9HC77 1338 aaPredicted RBP11.94□□□□□ -0.5
ATXN2-220ENST00000550236 NUTM2GQ5VZR2 741 aa11.94□□□□□ -0.5
ATXN2-220ENST00000550236 TRPM3Q9HCF6 1732 aaPredicted RBP11.93□□□□□ -0.5
ATXN2-220ENST00000550236 TNS3Q68CZ2 1445 aa11.93□□□□□ -0.5
ATXN2-220ENST00000550236 GPRASP1Q5JY77 1395 aa11.92□□□□□ -0.5
ATXN2-220ENST00000550236 ABCA3Q99758 1704 aa11.92□□□□□ -0.5
ATXN2-220ENST00000550236 ATP7BP35670 1465 aa11.92□□□□□ -0.5
ATXN2-220ENST00000550236 EIF3AQ14152 1382 aaKnown RBP11.92□□□□□ -0.5
ATXN2-220ENST00000550236 ACEP12821 1306 aa11.91□□□□□ -0.5
ATXN2-220ENST00000550236 ALS2Q96Q42 1657 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms