RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 JCADQ9P266 1359 aa17.24■□□□□ 0.35
LETMD1-221ENST00000550100 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
LETMD1-221ENST00000550100 SIRT1Q96EB6 747 aa17.24■□□□□ 0.35
LETMD1-221ENST00000550100 SAFB2Q14151 953 aaKnown RBP eCLIP17.23■□□□□ 0.35
LETMD1-221ENST00000550100 NHSL1Q5SYE7 1610 aa17.22■□□□□ 0.35
LETMD1-221ENST00000550100 PRAM1Q96QH2 718 aa17.22■□□□□ 0.35
LETMD1-221ENST00000550100 LAMC1P11047 1609 aa17.21■□□□□ 0.35
LETMD1-221ENST00000550100 TRAK1Q9UPV9 953 aa17.21■□□□□ 0.35
LETMD1-221ENST00000550100 LRP6O75581 1613 aa17.21■□□□□ 0.35
LETMD1-221ENST00000550100 CDC42BPGQ6DT37 1551 aa17.2■□□□□ 0.34
LETMD1-221ENST00000550100 TRIM26Q12899 539 aaPredicted RBP17.19■□□□□ 0.34
LETMD1-221ENST00000550100 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
LETMD1-221ENST00000550100 NBPF1Q3BBV0 1214 aa17.18■□□□□ 0.34
LETMD1-221ENST00000550100 ESCO1Q5FWF5 840 aa17.18■□□□□ 0.34
LETMD1-221ENST00000550100 POTEAQ6S8J7 498 aa17.18■□□□□ 0.34
LETMD1-221ENST00000550100 L3MBTL2Q969R5 705 aa17.18■□□□□ 0.34
LETMD1-221ENST00000550100 STAC3Q96MF2 364 aa17.18■□□□□ 0.34
LETMD1-221ENST00000550100 SOS2Q07890 1332 aaPredicted RBP17.17■□□□□ 0.34
LETMD1-221ENST00000550100 DLC1Q96QB1 1528 aa17.16■□□□□ 0.34
LETMD1-221ENST00000550100 SHPRHQ149N8 1683 aa17.16■□□□□ 0.34
LETMD1-221ENST00000550100 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
LETMD1-221ENST00000550100 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
LETMD1-221ENST00000550100 FMN2Q9NZ56 1722 aa17.15■□□□□ 0.34
LETMD1-221ENST00000550100 NUTM2BA6NNL0 878 aaPredicted RBP17.15■□□□□ 0.34
LETMD1-221ENST00000550100 NUTM2EB1AL46 878 aaPredicted RBP17.15■□□□□ 0.34
LETMD1-221ENST00000550100 FOXO3O43524 673 aa17.15■□□□□ 0.34
LETMD1-221ENST00000550100 NUTM2AQ8IVF1 878 aaPredicted RBP17.15■□□□□ 0.34
LETMD1-221ENST00000550100 LRRC59Q96AG4 307 aaKnown RBP17.15■□□□□ 0.34
LETMD1-221ENST00000550100 HIRIP3Q9BW71 556 aaPredicted RBP17.15■□□□□ 0.34
LETMD1-221ENST00000550100 POGKQ9P215 609 aa17.15■□□□□ 0.34
LETMD1-221ENST00000550100 RGPD8O14715 1765 aaPredicted RBP17.15■□□□□ 0.34
LETMD1-221ENST00000550100 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
LETMD1-221ENST00000550100 SOCS7O14512 581 aa17.14■□□□□ 0.33
LETMD1-221ENST00000550100 SPATA31A6Q5VVP1 1343 aa17.13■□□□□ 0.33
LETMD1-221ENST00000550100 MINK1Q8N4C8 1332 aaPredicted RBP17.13■□□□□ 0.33
LETMD1-221ENST00000550100 PXDNQ92626 1479 aa17.12■□□□□ 0.33
LETMD1-221ENST00000550100 PRR36Q9H6K5 1346 aa17.1■□□□□ 0.33
LETMD1-221ENST00000550100 USP32Q8NFA0 1604 aa17.1■□□□□ 0.33
LETMD1-221ENST00000550100 ARHGEF28Q8N1W1 1705 aaKnown RBP17.09■□□□□ 0.33
LETMD1-221ENST00000550100 KIAA1210Q9ULL0 1709 aa17.08■□□□□ 0.32
LETMD1-221ENST00000550100 NPHP3Q7Z494 1330 aa17.08■□□□□ 0.32
LETMD1-221ENST00000550100 NBPF8Q3BBV2 869 aa17.07■□□□□ 0.32
LETMD1-221ENST00000550100 PHF8Q9UPP1 1060 aa17.07■□□□□ 0.32
LETMD1-221ENST00000550100 ADGRB2O60241 1585 aa17.07■□□□□ 0.32
LETMD1-221ENST00000550100 WASLO00401 505 aaPredicted RBP17.06■□□□□ 0.32
LETMD1-221ENST00000550100 MEX3CQ5U5Q3 659 aaKnown RBP17.06■□□□□ 0.32
LETMD1-221ENST00000550100 PMFBP1Q8TBY8 1022 aa17.06■□□□□ 0.32
LETMD1-221ENST00000550100 KRT28Q7Z3Y7 464 aa17.05■□□□□ 0.32
LETMD1-221ENST00000550100 ADAMTS2O95450 1211 aa17.05■□□□□ 0.32
LETMD1-221ENST00000550100 SPATA31A3Q5VYP0 1347 aa17.03■□□□□ 0.32
LETMD1-221ENST00000550100 ANKARQ7Z5J8 1434 aa17.02■□□□□ 0.32
LETMD1-221ENST00000550100 C8orf37Q96NL8 207 aa17.02■□□□□ 0.32
LETMD1-221ENST00000550100 CDK19Q9BWU1 502 aa17.02■□□□□ 0.32
LETMD1-221ENST00000550100 AFF2P51816 1311 aa17.02■□□□□ 0.31
LETMD1-221ENST00000550100 COL22A1Q8NFW1 1626 aaPredicted RBP17.01■□□□□ 0.31
LETMD1-221ENST00000550100 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
LETMD1-221ENST00000550100 TRPM1Q7Z4N2 1603 aa17■□□□□ 0.31
LETMD1-221ENST00000550100 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
LETMD1-221ENST00000550100 NUDT16Q96DE0 195 aaKnown RBP16.99■□□□□ 0.31
LETMD1-221ENST00000550100 PSME1Q06323 249 aa16.99■□□□□ 0.31
LETMD1-221ENST00000550100 CABLES1Q8TDN4 633 aa16.99■□□□□ 0.31
LETMD1-221ENST00000550100 ZNF772Q68DY9 489 aaPredicted RBP16.98■□□□□ 0.31
LETMD1-221ENST00000550100 ATP7BP35670 1465 aa16.98■□□□□ 0.31
LETMD1-221ENST00000550100 PLEKHG5O94827 1062 aa16.97■□□□□ 0.31
LETMD1-221ENST00000550100 NGLY1Q96IV0 654 aa16.97■□□□□ 0.31
LETMD1-221ENST00000550100 CENPJQ9HC77 1338 aaPredicted RBP16.96■□□□□ 0.31
LETMD1-221ENST00000550100 SBNO1A3KN83 1393 aa16.95■□□□□ 0.3
LETMD1-221ENST00000550100 TNS3Q68CZ2 1445 aa16.95■□□□□ 0.3
LETMD1-221ENST00000550100 TRPM3Q9HCF6 1732 aaPredicted RBP16.94■□□□□ 0.3
LETMD1-221ENST00000550100 FNBP4Q8N3X1 1017 aaPredicted RBP16.94■□□□□ 0.3
LETMD1-221ENST00000550100 PCGF6Q9BYE7 350 aa16.94■□□□□ 0.3
LETMD1-221ENST00000550100 QTRT2Q9H974 415 aaKnown RBP16.94■□□□□ 0.3
LETMD1-221ENST00000550100 CABP2Q9NPB3 220 aa16.94■□□□□ 0.3
LETMD1-221ENST00000550100 ROCK2O75116 1388 aaKnown RBP16.94■□□□□ 0.3
LETMD1-221ENST00000550100 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
LETMD1-221ENST00000550100 NGDNQ8NEJ9 315 aaKnown RBP16.93■□□□□ 0.3
LETMD1-221ENST00000550100 QRICH2Q9H0J4 1663 aa16.92■□□□□ 0.3
LETMD1-221ENST00000550100 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
LETMD1-221ENST00000550100 RXRBP28702 533 aa16.92■□□□□ 0.3
LETMD1-221ENST00000550100 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
LETMD1-221ENST00000550100 TONSLQ96HA7 1378 aa16.91■□□□□ 0.3
LETMD1-221ENST00000550100 BCL9LQ86UU0 1499 aa16.91■□□□□ 0.3
LETMD1-221ENST00000550100 PLEKHG3A1L390 1219 aa16.91■□□□□ 0.3
LETMD1-221ENST00000550100 USP21Q9UK80 565 aa16.91■□□□□ 0.3
LETMD1-221ENST00000550100 CCDC61Q9Y6R9 512 aa16.91■□□□□ 0.3
LETMD1-221ENST00000550100 ACEP12821 1306 aa16.9■□□□□ 0.3
LETMD1-221ENST00000550100 MARF1Q9Y4F3 1742 aaKnown RBP16.9■□□□□ 0.3
LETMD1-221ENST00000550100 TOPAZ1Q8N9V7 1692 aa16.9■□□□□ 0.3
LETMD1-221ENST00000550100 ALS2Q96Q42 1657 aa16.9■□□□□ 0.3
LETMD1-221ENST00000550100 SRPK2P78362 688 aaKnown RBP16.89■□□□□ 0.29
LETMD1-221ENST00000550100 POLR3AO14802 1390 aaPredicted RBP16.89■□□□□ 0.29
LETMD1-221ENST00000550100 ABCA3Q99758 1704 aa16.87■□□□□ 0.29
LETMD1-221ENST00000550100 FAM83GA6ND36 823 aa16.87■□□□□ 0.29
LETMD1-221ENST00000550100 PAK3O75914 559 aaPredicted RBP16.87■□□□□ 0.29
LETMD1-221ENST00000550100 ITSN1Q15811 1721 aa16.87■□□□□ 0.29
LETMD1-221ENST00000550100 CARD11Q9BXL7 1154 aa16.86■□□□□ 0.29
LETMD1-221ENST00000550100 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
LETMD1-221ENST00000550100 ARHGEF10O15013 1369 aa16.86■□□□□ 0.29
LETMD1-221ENST00000550100 ATRNO75882 1429 aa16.86■□□□□ 0.29
LETMD1-221ENST00000550100 RALGAPBQ86X10 1494 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms