RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 CADPS2Q86UW7 1296 aa17.15■□□□□ 0.34
PFDN5-208ENST00000549995 RBM33Q96EV2 1170 aaKnown RBP17.15■□□□□ 0.34
PFDN5-208ENST00000549995 NBPF8Q3BBV2 869 aa17.13■□□□□ 0.33
PFDN5-208ENST00000549995 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
PFDN5-208ENST00000549995 USP32Q8NFA0 1604 aa17.12■□□□□ 0.33
PFDN5-208ENST00000549995 NBPF1Q3BBV0 1214 aa17.12■□□□□ 0.33
PFDN5-208ENST00000549995 STK26Q9P289 416 aa17.11■□□□□ 0.33
PFDN5-208ENST00000549995 C1orf167Q5SNV9 1468 aa17.11■□□□□ 0.33
PFDN5-208ENST00000549995 WAPLQ7Z5K2 1190 aa17.1■□□□□ 0.33
PFDN5-208ENST00000549995 COL16A1Q07092 1604 aaPredicted RBP17.1■□□□□ 0.33
PFDN5-208ENST00000549995 KIF1AQ12756 1690 aa17.1■□□□□ 0.33
PFDN5-208ENST00000549995 SLAIN2Q9P270 581 aa17.09■□□□□ 0.33
PFDN5-208ENST00000549995 RGPD8O14715 1765 aaPredicted RBP17.08■□□□□ 0.33
PFDN5-208ENST00000549995 TOPAZ1Q8N9V7 1692 aa17.08■□□□□ 0.32
PFDN5-208ENST00000549995 ROCK2O75116 1388 aaKnown RBP17.08■□□□□ 0.32
PFDN5-208ENST00000549995 ATF3P18847 181 aa17.08■□□□□ 0.32
PFDN5-208ENST00000549995 CCER1Q8TC90 406 aaPredicted RBP17.08■□□□□ 0.32
PFDN5-208ENST00000549995 PRAM1Q96QH2 718 aa17.08■□□□□ 0.32
PFDN5-208ENST00000549995 PHLPP1O60346 1717 aa17.07■□□□□ 0.32
PFDN5-208ENST00000549995 ITSN1Q15811 1721 aa17.07■□□□□ 0.32
PFDN5-208ENST00000549995 TULP4Q9NRJ4 1543 aa17.07■□□□□ 0.32
PFDN5-208ENST00000549995 ANKARQ7Z5J8 1434 aa17.07■□□□□ 0.32
PFDN5-208ENST00000549995 C14orf37Q86TY3 774 aa17.07■□□□□ 0.32
PFDN5-208ENST00000549995 TRAK1Q9UPV9 953 aa17.07■□□□□ 0.32
PFDN5-208ENST00000549995 SBNO2Q9Y2G9 1366 aa17.05■□□□□ 0.32
PFDN5-208ENST00000549995 EIF3AQ14152 1382 aaKnown RBP17.03■□□□□ 0.32
PFDN5-208ENST00000549995 ATP7BP35670 1465 aa17.03■□□□□ 0.32
PFDN5-208ENST00000549995 SHPRHQ149N8 1683 aa17.03■□□□□ 0.32
PFDN5-208ENST00000549995 PIP4K2BP78356 416 aa17.02■□□□□ 0.32
PFDN5-208ENST00000549995 BRINP3Q76B58 766 aa17.02■□□□□ 0.32
PFDN5-208ENST00000549995 POGKQ9P215 609 aa17.02■□□□□ 0.32
PFDN5-208ENST00000549995 CENPJQ9HC77 1338 aaPredicted RBP17.01■□□□□ 0.31
PFDN5-208ENST00000549995 HSPA1LP34931 641 aa16.99■□□□□ 0.31
PFDN5-208ENST00000549995 PXDNQ92626 1479 aa16.99■□□□□ 0.31
PFDN5-208ENST00000549995 WASLO00401 505 aaPredicted RBP16.98■□□□□ 0.31
PFDN5-208ENST00000549995 COL22A1Q8NFW1 1626 aaPredicted RBP16.97■□□□□ 0.31
PFDN5-208ENST00000549995 CARD11Q9BXL7 1154 aa16.97■□□□□ 0.31
PFDN5-208ENST00000549995 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
PFDN5-208ENST00000549995 TRPM3Q9HCF6 1732 aaPredicted RBP16.96■□□□□ 0.31
PFDN5-208ENST00000549995 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.3
PFDN5-208ENST00000549995 SAFB2Q14151 953 aaKnown RBP eCLIP16.95■□□□□ 0.3
PFDN5-208ENST00000549995 PRR36Q9H6K5 1346 aa16.95■□□□□ 0.3
PFDN5-208ENST00000549995 ORAI2Q96SN7 254 aa16.94■□□□□ 0.3
PFDN5-208ENST00000549995 SOS2Q07890 1332 aaPredicted RBP16.94■□□□□ 0.3
PFDN5-208ENST00000549995 ALS2Q96Q42 1657 aa16.92■□□□□ 0.3
PFDN5-208ENST00000549995 HIRIP3Q9BW71 556 aaPredicted RBP16.92■□□□□ 0.3
PFDN5-208ENST00000549995 AKAP12Q02952 1782 aa16.92■□□□□ 0.3
PFDN5-208ENST00000549995 USP47Q96K76 1375 aa16.91■□□□□ 0.3
PFDN5-208ENST00000549995 NPHP3Q7Z494 1330 aa16.91■□□□□ 0.3
PFDN5-208ENST00000549995 POLR3AO14802 1390 aaPredicted RBP16.9■□□□□ 0.3
PFDN5-208ENST00000549995 JCADQ9P266 1359 aa16.9■□□□□ 0.3
PFDN5-208ENST00000549995 MED1Q15648 1581 aaPredicted RBP16.89■□□□□ 0.3
PFDN5-208ENST00000549995 ESCO1Q5FWF5 840 aa16.89■□□□□ 0.29
PFDN5-208ENST00000549995 TESK2Q96S53 571 aa16.89■□□□□ 0.29
PFDN5-208ENST00000549995 CDK19Q9BWU1 502 aa16.89■□□□□ 0.29
PFDN5-208ENST00000549995 CRYBG1Q9Y4K1 1723 aa16.89■□□□□ 0.29
PFDN5-208ENST00000549995 ABCA3Q99758 1704 aa16.88■□□□□ 0.29
PFDN5-208ENST00000549995 PUS7Q96PZ0 661 aaKnown RBP16.88■□□□□ 0.29
PFDN5-208ENST00000549995 PHF8Q9UPP1 1060 aa16.88■□□□□ 0.29
PFDN5-208ENST00000549995 NRKQ7Z2Y5 1582 aa16.88■□□□□ 0.29
PFDN5-208ENST00000549995 EVC2Q86UK5 1308 aa16.88■□□□□ 0.29
PFDN5-208ENST00000549995 NUDT16Q96DE0 195 aaKnown RBP16.87■□□□□ 0.29
PFDN5-208ENST00000549995 SBNO1A3KN83 1393 aa16.87■□□□□ 0.29
PFDN5-208ENST00000549995 MON2Q7Z3U7 1717 aa16.87■□□□□ 0.29
PFDN5-208ENST00000549995 PLEKHG3A1L390 1219 aa16.86■□□□□ 0.29
PFDN5-208ENST00000549995 SLC24A1O60721 1099 aa16.86■□□□□ 0.29
PFDN5-208ENST00000549995 PNPLA6Q8IY17 1366 aa16.86■□□□□ 0.29
PFDN5-208ENST00000549995 MARF1Q9Y4F3 1742 aaKnown RBP16.85■□□□□ 0.29
PFDN5-208ENST00000549995 NUTM2FA1L443 756 aa16.85■□□□□ 0.29
PFDN5-208ENST00000549995 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
PFDN5-208ENST00000549995 ATAD2Q6PL18 1390 aa16.85■□□□□ 0.29
PFDN5-208ENST00000549995 TNS3Q68CZ2 1445 aa16.85■□□□□ 0.29
PFDN5-208ENST00000549995 PPIP5K1Q6PFW1 1433 aa16.85■□□□□ 0.29
PFDN5-208ENST00000549995 MYOM1P52179 1685 aa16.85■□□□□ 0.29
PFDN5-208ENST00000549995 ST20-MTHFSA0A0A6YYL1 179 aa16.84■□□□□ 0.29
PFDN5-208ENST00000549995 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
PFDN5-208ENST00000549995 BRD4O60885 1362 aaPredicted RBP16.84■□□□□ 0.29
PFDN5-208ENST00000549995 LRP6O75581 1613 aa16.83■□□□□ 0.28
PFDN5-208ENST00000549995 SPATA31A6Q5VVP1 1343 aa16.83■□□□□ 0.28
PFDN5-208ENST00000549995 USP54Q70EL1 1684 aa16.83■□□□□ 0.28
PFDN5-208ENST00000549995 DDX17Q92841 729 aaKnown RBP16.83■□□□□ 0.28
PFDN5-208ENST00000549995 FOXO3O43524 673 aa16.82■□□□□ 0.28
PFDN5-208ENST00000549995 CD163L1Q9NR16 1453 aa16.81■□□□□ 0.28
PFDN5-208ENST00000549995 CPSF1Q10570 1443 aaKnown RBP16.81■□□□□ 0.28
PFDN5-208ENST00000549995 SSH2Q76I76 1423 aa16.81■□□□□ 0.28
PFDN5-208ENST00000549995 SPATA31A3Q5VYP0 1347 aa16.81■□□□□ 0.28
PFDN5-208ENST00000549995 CABP2Q9NPB3 220 aa16.81■□□□□ 0.28
PFDN5-208ENST00000549995 NINLQ9Y2I6 1382 aa16.8■□□□□ 0.28
PFDN5-208ENST00000549995 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
PFDN5-208ENST00000549995 DISP3Q9P2K9 1392 aa16.79■□□□□ 0.28
PFDN5-208ENST00000549995 PHRF1Q9P1Y6 1649 aaKnown RBP16.79■□□□□ 0.28
PFDN5-208ENST00000549995 ACEP12821 1306 aa16.78■□□□□ 0.28
PFDN5-208ENST00000549995 KRT28Q7Z3Y7 464 aa16.78■□□□□ 0.28
PFDN5-208ENST00000549995 PMFBP1Q8TBY8 1022 aa16.78■□□□□ 0.28
PFDN5-208ENST00000549995 PIK3C2AO00443 1686 aa16.78■□□□□ 0.28
PFDN5-208ENST00000549995 USP6P35125 1406 aa16.78■□□□□ 0.28
PFDN5-208ENST00000549995 ARHGEF10O15013 1369 aa16.77■□□□□ 0.28
PFDN5-208ENST00000549995 PSME1Q06323 249 aa16.77■□□□□ 0.28
PFDN5-208ENST00000549995 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
PFDN5-208ENST00000549995 TMF1P82094 1093 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms