RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-208ENST00000549205 SAFB2Q14151 953 aaKnown RBP eCLIP17.06■□□□□ 0.32
ERBB3-208ENST00000549205 WAPLQ7Z5K2 1190 aa17.06■□□□□ 0.32
ERBB3-208ENST00000549205 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
ERBB3-208ENST00000549205 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
ERBB3-208ENST00000549205 ADGRB2O60241 1585 aa17.05■□□□□ 0.32
ERBB3-208ENST00000549205 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
ERBB3-208ENST00000549205 AEBP2Q6ZN18 517 aaPredicted RBP17.04■□□□□ 0.32
ERBB3-208ENST00000549205 MINK1Q8N4C8 1332 aaPredicted RBP17.03■□□□□ 0.32
ERBB3-208ENST00000549205 NALCNQ8IZF0 1738 aa17.02■□□□□ 0.32
ERBB3-208ENST00000549205 CDCA8Q53HL2 280 aa17.02■□□□□ 0.32
ERBB3-208ENST00000549205 EVC2Q86UK5 1308 aa17.01■□□□□ 0.31
ERBB3-208ENST00000549205 MYOM1P52179 1685 aa17.01■□□□□ 0.31
ERBB3-208ENST00000549205 XIRP1Q702N8 1843 aaKnown RBP16.99■□□□□ 0.31
ERBB3-208ENST00000549205 PUS7Q96PZ0 661 aaKnown RBP16.98■□□□□ 0.31
ERBB3-208ENST00000549205 POLR3GLQ9BT43 218 aa16.98■□□□□ 0.31
ERBB3-208ENST00000549205 FMN2Q9NZ56 1722 aa16.96■□□□□ 0.31
ERBB3-208ENST00000549205 DDX10Q13206 875 aaKnown RBP16.96■□□□□ 0.31
ERBB3-208ENST00000549205 CDC42BPGQ6DT37 1551 aa16.96■□□□□ 0.31
ERBB3-208ENST00000549205 ADGRL3Q9HAR2 1447 aa16.96■□□□□ 0.3
ERBB3-208ENST00000549205 RGPD8O14715 1765 aaPredicted RBP16.95■□□□□ 0.3
ERBB3-208ENST00000549205 WASLO00401 505 aaPredicted RBP16.95■□□□□ 0.3
ERBB3-208ENST00000549205 PROSER2Q86WR7 435 aaPredicted RBP16.95■□□□□ 0.3
ERBB3-208ENST00000549205 CDK19Q9BWU1 502 aa16.95■□□□□ 0.3
ERBB3-208ENST00000549205 ZNF335Q9H4Z2 1342 aaPredicted RBP16.95■□□□□ 0.3
ERBB3-208ENST00000549205 ITSN1Q15811 1721 aa16.94■□□□□ 0.3
ERBB3-208ENST00000549205 CABP2Q9NPB3 220 aa16.94■□□□□ 0.3
ERBB3-208ENST00000549205 SRPK2P78362 688 aaKnown RBP16.93■□□□□ 0.3
ERBB3-208ENST00000549205 TOPAZ1Q8N9V7 1692 aa16.93■□□□□ 0.3
ERBB3-208ENST00000549205 NCOA3Q9Y6Q9 1424 aa16.93■□□□□ 0.3
ERBB3-208ENST00000549205 ATAD2Q6PL18 1390 aa16.92■□□□□ 0.3
ERBB3-208ENST00000549205 USP32Q8NFA0 1604 aa16.92■□□□□ 0.3
ERBB3-208ENST00000549205 LRRC7Q96NW7 1537 aa16.91■□□□□ 0.3
ERBB3-208ENST00000549205 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
ERBB3-208ENST00000549205 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
ERBB3-208ENST00000549205 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
ERBB3-208ENST00000549205 ATP7BP35670 1465 aa16.9■□□□□ 0.3
ERBB3-208ENST00000549205 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.3
ERBB3-208ENST00000549205 C14orf37Q86TY3 774 aa16.89■□□□□ 0.29
ERBB3-208ENST00000549205 LTBP4Q8N2S1 1624 aa16.88■□□□□ 0.29
ERBB3-208ENST00000549205 DCCP43146 1447 aa16.87■□□□□ 0.29
ERBB3-208ENST00000549205 ANKARQ7Z5J8 1434 aa16.87■□□□□ 0.29
ERBB3-208ENST00000549205 NUDT16Q96DE0 195 aaKnown RBP16.87■□□□□ 0.29
ERBB3-208ENST00000549205 PRR36Q9H6K5 1346 aa16.87■□□□□ 0.29
ERBB3-208ENST00000549205 AKAP12Q02952 1782 aa16.87■□□□□ 0.29
ERBB3-208ENST00000549205 TMC1Q8TDI8 760 aa16.86■□□□□ 0.29
ERBB3-208ENST00000549205 C19orf44Q9H6X5 657 aa16.86■□□□□ 0.29
ERBB3-208ENST00000549205 SLC12A5Q9H2X9 1139 aa16.85■□□□□ 0.29
ERBB3-208ENST00000549205 PANK3Q9H999 370 aa16.85■□□□□ 0.29
ERBB3-208ENST00000549205 PPIP5K1Q6PFW1 1433 aa16.85■□□□□ 0.29
ERBB3-208ENST00000549205 CCDC61Q9Y6R9 512 aa16.84■□□□□ 0.29
ERBB3-208ENST00000549205 MON2Q7Z3U7 1717 aa16.84■□□□□ 0.29
ERBB3-208ENST00000549205 MSH6P52701 1360 aa16.83■□□□□ 0.28
ERBB3-208ENST00000549205 ANKRD36BQ8N2N9 1353 aa16.83■□□□□ 0.28
ERBB3-208ENST00000549205 CD163L1Q9NR16 1453 aa16.83■□□□□ 0.28
ERBB3-208ENST00000549205 NUTM2FA1L443 756 aa16.82■□□□□ 0.28
ERBB3-208ENST00000549205 CABP1Q9NZU7 370 aa16.82■□□□□ 0.28
ERBB3-208ENST00000549205 A0A1W2PP64 1363 aa16.8■□□□□ 0.28
ERBB3-208ENST00000549205 PER1O15534 1290 aaPredicted RBP16.8■□□□□ 0.28
ERBB3-208ENST00000549205 ATF3P18847 181 aa16.8■□□□□ 0.28
ERBB3-208ENST00000549205 TERF2IPQ9NYB0 399 aa16.8■□□□□ 0.28
ERBB3-208ENST00000549205 MST1RQ04912 1400 aa16.79■□□□□ 0.28
ERBB3-208ENST00000549205 CPSF1Q10570 1443 aaKnown RBP16.79■□□□□ 0.28
ERBB3-208ENST00000549205 PLEKHG3A1L390 1219 aa16.79■□□□□ 0.28
ERBB3-208ENST00000549205 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
ERBB3-208ENST00000549205 KIF20BQ96Q89 1820 aa16.78■□□□□ 0.28
ERBB3-208ENST00000549205 HDGFL2Q7Z4V5 671 aaPredicted RBP16.78■□□□□ 0.28
ERBB3-208ENST00000549205 CADPS2Q86UW7 1296 aa16.78■□□□□ 0.28
ERBB3-208ENST00000549205 CARD14Q9BXL6 1004 aa16.78■□□□□ 0.28
ERBB3-208ENST00000549205 C1orf167Q5SNV9 1468 aa16.78■□□□□ 0.28
ERBB3-208ENST00000549205 KNSTRNQ9Y448 316 aa16.77■□□□□ 0.28
ERBB3-208ENST00000549205 NSD3Q9BZ95 1437 aa16.77■□□□□ 0.27
ERBB3-208ENST00000549205 NRKQ7Z2Y5 1582 aa16.77■□□□□ 0.27
ERBB3-208ENST00000549205 POLR3AO14802 1390 aaPredicted RBP16.77■□□□□ 0.27
ERBB3-208ENST00000549205 ANKRD26Q9UPS8 1709 aa16.76■□□□□ 0.27
ERBB3-208ENST00000549205 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
ERBB3-208ENST00000549205 ACEP12821 1306 aa16.74■□□□□ 0.27
ERBB3-208ENST00000549205 EDC4Q6P2E9 1401 aaKnown RBP16.74■□□□□ 0.27
ERBB3-208ENST00000549205 PHF8Q9UPP1 1060 aa16.74■□□□□ 0.27
ERBB3-208ENST00000549205 NPC1L1Q9UHC9 1359 aa16.74■□□□□ 0.27
ERBB3-208ENST00000549205 ANP32CO43423 234 aa16.73■□□□□ 0.27
ERBB3-208ENST00000549205 AMER1Q5JTC6 1135 aaPredicted RBP16.73■□□□□ 0.27
ERBB3-208ENST00000549205 PMFBP1Q8TBY8 1022 aa16.73■□□□□ 0.27
ERBB3-208ENST00000549205 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
ERBB3-208ENST00000549205 USP6P35125 1406 aa16.72■□□□□ 0.27
ERBB3-208ENST00000549205 ESCO1Q5FWF5 840 aa16.72■□□□□ 0.27
ERBB3-208ENST00000549205 NGDNQ8NEJ9 315 aaKnown RBP16.72■□□□□ 0.27
ERBB3-208ENST00000549205 CGNL1Q0VF96 1302 aa16.71■□□□□ 0.27
ERBB3-208ENST00000549205 ORAI2Q96SN7 254 aa16.71■□□□□ 0.27
ERBB3-208ENST00000549205 IQSEC2Q5JU85 1478 aa16.69■□□□□ 0.26
ERBB3-208ENST00000549205 NSD2O96028 1365 aa16.69■□□□□ 0.26
ERBB3-208ENST00000549205 MIER1Q8N108 512 aa16.69■□□□□ 0.26
ERBB3-208ENST00000549205 PRKRIP1Q9H875 184 aaPredicted RBP16.69■□□□□ 0.26
ERBB3-208ENST00000549205 SLAIN2Q9P270 581 aa16.69■□□□□ 0.26
ERBB3-208ENST00000549205 SSH2Q76I76 1423 aa16.69■□□□□ 0.26
ERBB3-208ENST00000549205 TRPM3Q9HCF6 1732 aaPredicted RBP16.68■□□□□ 0.26
ERBB3-208ENST00000549205 BRD4O60885 1362 aaPredicted RBP16.68■□□□□ 0.26
ERBB3-208ENST00000549205 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
ERBB3-208ENST00000549205 PARD3Q8TEW0 1356 aa16.67■□□□□ 0.26
ERBB3-208ENST00000549205 PIK3C2AO00443 1686 aa16.66■□□□□ 0.26
ERBB3-208ENST00000549205 CNGB1Q14028 1251 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms