RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 ARHGEF28Q8N1W1 1705 aaKnown RBP24.71■■□□□ 1.55
HDAC7-227ENST00000548080 DLC1Q96QB1 1528 aa24.7■■□□□ 1.54
HDAC7-227ENST00000548080 FAM135BQ49AJ0 1406 aa24.69■■□□□ 1.54
HDAC7-227ENST00000548080 POGKQ9P215 609 aa24.69■■□□□ 1.54
HDAC7-227ENST00000548080 CADPS2Q86UW7 1296 aa24.68■■□□□ 1.54
HDAC7-227ENST00000548080 SLAIN2Q9P270 581 aa24.68■■□□□ 1.54
HDAC7-227ENST00000548080 ROBO1Q9Y6N7 1651 aa24.67■■□□□ 1.54
HDAC7-227ENST00000548080 ROCK2O75116 1388 aaKnown RBP24.67■■□□□ 1.54
HDAC7-227ENST00000548080 DCCP43146 1447 aa24.66■■□□□ 1.54
HDAC7-227ENST00000548080 MST1RQ04912 1400 aa24.65■■□□□ 1.54
HDAC7-227ENST00000548080 SIRT1Q96EB6 747 aa24.64■■□□□ 1.54
HDAC7-227ENST00000548080 HIRIP3Q9BW71 556 aaPredicted RBP24.64■■□□□ 1.54
HDAC7-227ENST00000548080 MINK1Q8N4C8 1332 aaPredicted RBP24.64■■□□□ 1.53
HDAC7-227ENST00000548080 NUTM2FA1L443 756 aa24.64■■□□□ 1.53
HDAC7-227ENST00000548080 CDC42BPGQ6DT37 1551 aa24.62■■□□□ 1.53
HDAC7-227ENST00000548080 HSPA1LP34931 641 aa24.62■■□□□ 1.53
HDAC7-227ENST00000548080 RALGAPBQ86X10 1494 aa24.61■■□□□ 1.53
HDAC7-227ENST00000548080 FMN2Q9NZ56 1722 aa24.59■■□□□ 1.53
HDAC7-227ENST00000548080 C1orf167Q5SNV9 1468 aa24.58■■□□□ 1.53
HDAC7-227ENST00000548080 ZNF316A6NFI3 1004 aaPredicted RBP24.58■■□□□ 1.52
HDAC7-227ENST00000548080 CARD11Q9BXL7 1154 aa24.58■■□□□ 1.52
HDAC7-227ENST00000548080 GPRASP1Q5JY77 1395 aa24.57■■□□□ 1.52
HDAC7-227ENST00000548080 BRINP3Q76B58 766 aa24.57■■□□□ 1.52
HDAC7-227ENST00000548080 QRICH2Q9H0J4 1663 aa24.56■■□□□ 1.52
HDAC7-227ENST00000548080 ORAI2Q96SN7 254 aa24.55■■□□□ 1.52
HDAC7-227ENST00000548080 ADGRB2O60241 1585 aa24.55■■□□□ 1.52
HDAC7-227ENST00000548080 RGPD8O14715 1765 aaPredicted RBP24.54■■□□□ 1.52
HDAC7-227ENST00000548080 CENPJQ9HC77 1338 aaPredicted RBP24.54■■□□□ 1.52
HDAC7-227ENST00000548080 DDX17Q92841 729 aaKnown RBP24.53■■□□□ 1.52
HDAC7-227ENST00000548080 PHLPP1O60346 1717 aa24.52■■□□□ 1.52
HDAC7-227ENST00000548080 ESCO1Q5FWF5 840 aa24.5■■□□□ 1.51
HDAC7-227ENST00000548080 USP32Q8NFA0 1604 aa24.49■■□□□ 1.51
HDAC7-227ENST00000548080 WASLO00401 505 aaPredicted RBP24.48■■□□□ 1.51
HDAC7-227ENST00000548080 EIF3AQ14152 1382 aaKnown RBP24.46■■□□□ 1.51
HDAC7-227ENST00000548080 NHSL1Q5SYE7 1610 aa24.46■■□□□ 1.51
HDAC7-227ENST00000548080 PRR36Q9H6K5 1346 aa24.45■■□□□ 1.51
HDAC7-227ENST00000548080 AHDC1Q5TGY3 1603 aaPredicted RBP24.45■■□□□ 1.5
HDAC7-227ENST00000548080 CDK19Q9BWU1 502 aa24.45■■□□□ 1.5
HDAC7-227ENST00000548080 COL16A1Q07092 1604 aaPredicted RBP24.44■■□□□ 1.5
HDAC7-227ENST00000548080 TULP4Q9NRJ4 1543 aa24.44■■□□□ 1.5
HDAC7-227ENST00000548080 XPCQ01831 940 aaPredicted RBP24.42■■□□□ 1.5
HDAC7-227ENST00000548080 PMFBP1Q8TBY8 1022 aa24.4■■□□□ 1.5
HDAC7-227ENST00000548080 ANKARQ7Z5J8 1434 aa24.4■■□□□ 1.5
HDAC7-227ENST00000548080 ATP7BP35670 1465 aa24.4■■□□□ 1.5
HDAC7-227ENST00000548080 FOXO3O43524 673 aa24.39■■□□□ 1.5
HDAC7-227ENST00000548080 CABP2Q9NPB3 220 aa24.39■■□□□ 1.5
HDAC7-227ENST00000548080 SRPK2P78362 688 aaKnown RBP24.38■■□□□ 1.49
HDAC7-227ENST00000548080 NUDT16Q96DE0 195 aaKnown RBP24.38■■□□□ 1.49
HDAC7-227ENST00000548080 PHF8Q9UPP1 1060 aa24.38■■□□□ 1.49
HDAC7-227ENST00000548080 USP47Q96K76 1375 aa24.38■■□□□ 1.49
HDAC7-227ENST00000548080 KIF1AQ12756 1690 aa24.38■■□□□ 1.49
HDAC7-227ENST00000548080 ST20-MTHFSA0A0A6YYL1 179 aa24.38■■□□□ 1.49
HDAC7-227ENST00000548080 EIF4G2P78344 907 aaKnown RBP eCLIP24.35■■□□□ 1.49
HDAC7-227ENST00000548080 ITSN1Q15811 1721 aa24.35■■□□□ 1.49
HDAC7-227ENST00000548080 TOPAZ1Q8N9V7 1692 aa24.35■■□□□ 1.49
HDAC7-227ENST00000548080 EVC2Q86UK5 1308 aa24.34■■□□□ 1.49
HDAC7-227ENST00000548080 NPHP3Q7Z494 1330 aa24.33■■□□□ 1.49
HDAC7-227ENST00000548080 PXDNQ92626 1479 aa24.33■■□□□ 1.49
HDAC7-227ENST00000548080 HSPA5P11021 654 aaKnown RBP24.32■■□□□ 1.48
HDAC7-227ENST00000548080 SOS2Q07890 1332 aaPredicted RBP24.3■■□□□ 1.48
HDAC7-227ENST00000548080 TESK2Q96S53 571 aa24.3■■□□□ 1.48
HDAC7-227ENST00000548080 JCADQ9P266 1359 aa24.29■■□□□ 1.48
HDAC7-227ENST00000548080 SBNO2Q9Y2G9 1366 aa24.29■■□□□ 1.48
HDAC7-227ENST00000548080 KRT28Q7Z3Y7 464 aa24.29■■□□□ 1.48
HDAC7-227ENST00000548080 NGDNQ8NEJ9 315 aaKnown RBP24.28■■□□□ 1.48
HDAC7-227ENST00000548080 PPIP5K1Q6PFW1 1433 aa24.28■■□□□ 1.48
HDAC7-227ENST00000548080 SHPRHQ149N8 1683 aa24.27■■□□□ 1.48
HDAC7-227ENST00000548080 CCDC61Q9Y6R9 512 aa24.27■■□□□ 1.48
HDAC7-227ENST00000548080 PSME1Q06323 249 aa24.26■■□□□ 1.47
HDAC7-227ENST00000548080 LRRC59Q96AG4 307 aaKnown RBP24.26■■□□□ 1.47
HDAC7-227ENST00000548080 MED1Q15648 1581 aaPredicted RBP24.25■■□□□ 1.47
HDAC7-227ENST00000548080 PNPLA6Q8IY17 1366 aa24.25■■□□□ 1.47
HDAC7-227ENST00000548080 DISP3Q9P2K9 1392 aa24.24■■□□□ 1.47
HDAC7-227ENST00000548080 ACEP12821 1306 aa24.24■■□□□ 1.47
HDAC7-227ENST00000548080 PLEKHG5O94827 1062 aa24.24■■□□□ 1.47
HDAC7-227ENST00000548080 CABP1Q9NZU7 370 aa24.24■■□□□ 1.47
HDAC7-227ENST00000548080 NUTM2BA6NNL0 878 aaPredicted RBP24.23■■□□□ 1.47
HDAC7-227ENST00000548080 NUTM2EB1AL46 878 aaPredicted RBP24.23■■□□□ 1.47
HDAC7-227ENST00000548080 NUTM2AQ8IVF1 878 aaPredicted RBP24.23■■□□□ 1.47
HDAC7-227ENST00000548080 TRPM3Q9HCF6 1732 aaPredicted RBP24.22■■□□□ 1.47
HDAC7-227ENST00000548080 PLEKHG3A1L390 1219 aa24.21■■□□□ 1.47
HDAC7-227ENST00000548080 LMOD2Q6P5Q4 547 aa24.21■■□□□ 1.47
HDAC7-227ENST00000548080 LRP6O75581 1613 aa24.21■■□□□ 1.47
HDAC7-227ENST00000548080 DIEXFQ68CQ4 756 aaKnown RBP24.2■■□□□ 1.47
HDAC7-227ENST00000548080 SPATA31A3Q5VYP0 1347 aa24.2■■□□□ 1.46
HDAC7-227ENST00000548080 POLR3AO14802 1390 aaPredicted RBP24.19■■□□□ 1.46
HDAC7-227ENST00000548080 PAK3O75914 559 aaPredicted RBP24.19■■□□□ 1.46
HDAC7-227ENST00000548080 TNS3Q68CZ2 1445 aa24.18■■□□□ 1.46
HDAC7-227ENST00000548080 ATAD2Q6PL18 1390 aa24.18■■□□□ 1.46
HDAC7-227ENST00000548080 TMC1Q8TDI8 760 aa24.18■■□□□ 1.46
HDAC7-227ENST00000548080 TMF1P82094 1093 aa24.16■■□□□ 1.46
HDAC7-227ENST00000548080 SBNO1A3KN83 1393 aa24.16■■□□□ 1.46
HDAC7-227ENST00000548080 ALS2Q96Q42 1657 aa24.15■■□□□ 1.46
HDAC7-227ENST00000548080 SPATA31A6Q5VVP1 1343 aa24.15■■□□□ 1.46
HDAC7-227ENST00000548080 COL22A1Q8NFW1 1626 aaPredicted RBP24.14■■□□□ 1.46
HDAC7-227ENST00000548080 SLC12A5Q9H2X9 1139 aa24.14■■□□□ 1.46
HDAC7-227ENST00000548080 AKAP12Q02952 1782 aa24.13■■□□□ 1.45
HDAC7-227ENST00000548080 NUTM2GQ5VZR2 741 aa24.13■■□□□ 1.45
HDAC7-227ENST00000548080 CABLES1Q8TDN4 633 aa24.13■■□□□ 1.45
HDAC7-227ENST00000548080 POLR3GLQ9BT43 218 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms