RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ROCK2O75116 1388 aaKnown RBP23.99■■□□□ 1.43
LTBR-215ENST00000546296 KNDC1Q76NI1 1749 aa23.98■■□□□ 1.43
LTBR-215ENST00000546296 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.98■■□□□ 1.43
LTBR-215ENST00000546296 DCCP43146 1447 aa23.98■■□□□ 1.43
LTBR-215ENST00000546296 DLC1Q96QB1 1528 aa23.97■■□□□ 1.43
LTBR-215ENST00000546296 NALCNQ8IZF0 1738 aa23.93■■□□□ 1.42
LTBR-215ENST00000546296 MINK1Q8N4C8 1332 aaPredicted RBP23.92■■□□□ 1.42
LTBR-215ENST00000546296 CARD11Q9BXL7 1154 aa23.92■■□□□ 1.42
LTBR-215ENST00000546296 TRPM1Q7Z4N2 1603 aa23.92■■□□□ 1.42
LTBR-215ENST00000546296 HIRIP3Q9BW71 556 aaPredicted RBP23.91■■□□□ 1.42
LTBR-215ENST00000546296 HSPA1LP34931 641 aa23.9■■□□□ 1.42
LTBR-215ENST00000546296 NUTM2FA1L443 756 aa23.89■■□□□ 1.41
LTBR-215ENST00000546296 MST1RQ04912 1400 aa23.89■■□□□ 1.41
LTBR-215ENST00000546296 CENPJQ9HC77 1338 aaPredicted RBP23.87■■□□□ 1.41
LTBR-215ENST00000546296 RALGAPBQ86X10 1494 aa23.87■■□□□ 1.41
LTBR-215ENST00000546296 BRINP3Q76B58 766 aa23.86■■□□□ 1.41
LTBR-215ENST00000546296 GPRASP1Q5JY77 1395 aa23.86■■□□□ 1.41
LTBR-215ENST00000546296 C1orf167Q5SNV9 1468 aa23.86■■□□□ 1.41
LTBR-215ENST00000546296 CDC42BPGQ6DT37 1551 aa23.85■■□□□ 1.41
LTBR-215ENST00000546296 ROBO1Q9Y6N7 1651 aa23.84■■□□□ 1.41
LTBR-215ENST00000546296 EIF3AQ14152 1382 aaKnown RBP23.84■■□□□ 1.41
LTBR-215ENST00000546296 ESCO1Q5FWF5 840 aa23.84■■□□□ 1.41
LTBR-215ENST00000546296 WASLO00401 505 aaPredicted RBP23.83■■□□□ 1.41
LTBR-215ENST00000546296 ORAI2Q96SN7 254 aa23.83■■□□□ 1.41
LTBR-215ENST00000546296 ARHGEF28Q8N1W1 1705 aaKnown RBP23.83■■□□□ 1.41
LTBR-215ENST00000546296 CDK19Q9BWU1 502 aa23.79■■□□□ 1.4
LTBR-215ENST00000546296 DDX17Q92841 729 aaKnown RBP23.76■■□□□ 1.39
LTBR-215ENST00000546296 ADGRB2O60241 1585 aa23.76■■□□□ 1.39
LTBR-215ENST00000546296 SRPK2P78362 688 aaKnown RBP23.75■■□□□ 1.39
LTBR-215ENST00000546296 FMN2Q9NZ56 1722 aa23.74■■□□□ 1.39
LTBR-215ENST00000546296 NUDT16Q96DE0 195 aaKnown RBP23.73■■□□□ 1.39
LTBR-215ENST00000546296 PHF8Q9UPP1 1060 aa23.73■■□□□ 1.39
LTBR-215ENST00000546296 ANKARQ7Z5J8 1434 aa23.73■■□□□ 1.39
LTBR-215ENST00000546296 FOXO3O43524 673 aa23.72■■□□□ 1.39
LTBR-215ENST00000546296 EVC2Q86UK5 1308 aa23.72■■□□□ 1.39
LTBR-215ENST00000546296 QRICH2Q9H0J4 1663 aa23.7■■□□□ 1.39
LTBR-215ENST00000546296 NPHP3Q7Z494 1330 aa23.7■■□□□ 1.38
LTBR-215ENST00000546296 PRR36Q9H6K5 1346 aa23.7■■□□□ 1.38
LTBR-215ENST00000546296 ST20-MTHFSA0A0A6YYL1 179 aa23.7■■□□□ 1.38
LTBR-215ENST00000546296 PMFBP1Q8TBY8 1022 aa23.7■■□□□ 1.38
LTBR-215ENST00000546296 CABP2Q9NPB3 220 aa23.7■■□□□ 1.38
LTBR-215ENST00000546296 PHLPP1O60346 1717 aa23.7■■□□□ 1.38
LTBR-215ENST00000546296 TULP4Q9NRJ4 1543 aa23.69■■□□□ 1.38
LTBR-215ENST00000546296 AHDC1Q5TGY3 1603 aaPredicted RBP23.69■■□□□ 1.38
LTBR-215ENST00000546296 USP47Q96K76 1375 aa23.68■■□□□ 1.38
LTBR-215ENST00000546296 XPCQ01831 940 aaPredicted RBP23.67■■□□□ 1.38
LTBR-215ENST00000546296 LRRC59Q96AG4 307 aaKnown RBP23.67■■□□□ 1.38
LTBR-215ENST00000546296 CCDC61Q9Y6R9 512 aa23.67■■□□□ 1.38
LTBR-215ENST00000546296 PSME1Q06323 249 aa23.66■■□□□ 1.38
LTBR-215ENST00000546296 SLC24A1O60721 1099 aa23.65■■□□□ 1.38
LTBR-215ENST00000546296 KRT28Q7Z3Y7 464 aa23.65■■□□□ 1.38
LTBR-215ENST00000546296 NGDNQ8NEJ9 315 aaKnown RBP23.65■■□□□ 1.38
LTBR-215ENST00000546296 SOS2Q07890 1332 aaPredicted RBP23.64■■□□□ 1.38
LTBR-215ENST00000546296 JCADQ9P266 1359 aa23.64■■□□□ 1.37
LTBR-215ENST00000546296 SBNO2Q9Y2G9 1366 aa23.64■■□□□ 1.37
LTBR-215ENST00000546296 NHSL1Q5SYE7 1610 aa23.62■■□□□ 1.37
LTBR-215ENST00000546296 USP32Q8NFA0 1604 aa23.62■■□□□ 1.37
LTBR-215ENST00000546296 COL16A1Q07092 1604 aaPredicted RBP23.62■■□□□ 1.37
LTBR-215ENST00000546296 ATP7BP35670 1465 aa23.62■■□□□ 1.37
LTBR-215ENST00000546296 KIF1AQ12756 1690 aa23.61■■□□□ 1.37
LTBR-215ENST00000546296 RGPD8O14715 1765 aaPredicted RBP23.61■■□□□ 1.37
LTBR-215ENST00000546296 TESK2Q96S53 571 aa23.61■■□□□ 1.37
LTBR-215ENST00000546296 PLEKHG3A1L390 1219 aa23.59■■□□□ 1.37
LTBR-215ENST00000546296 EIF4G2P78344 907 aaKnown RBP eCLIP23.59■■□□□ 1.37
LTBR-215ENST00000546296 CABP1Q9NZU7 370 aa23.59■■□□□ 1.37
LTBR-215ENST00000546296 PPIP5K1Q6PFW1 1433 aa23.58■■□□□ 1.36
LTBR-215ENST00000546296 TMF1P82094 1093 aa23.57■■□□□ 1.36
LTBR-215ENST00000546296 ACEP12821 1306 aa23.57■■□□□ 1.36
LTBR-215ENST00000546296 PXDNQ92626 1479 aa23.56■■□□□ 1.36
LTBR-215ENST00000546296 LMOD2Q6P5Q4 547 aa23.56■■□□□ 1.36
LTBR-215ENST00000546296 ATAD2Q6PL18 1390 aa23.55■■□□□ 1.36
LTBR-215ENST00000546296 NUTM2BA6NNL0 878 aaPredicted RBP23.54■■□□□ 1.36
LTBR-215ENST00000546296 NUTM2EB1AL46 878 aaPredicted RBP23.54■■□□□ 1.36
LTBR-215ENST00000546296 PAK3O75914 559 aaPredicted RBP23.54■■□□□ 1.36
LTBR-215ENST00000546296 HSPA5P11021 654 aaKnown RBP23.54■■□□□ 1.36
LTBR-215ENST00000546296 NUTM2AQ8IVF1 878 aaPredicted RBP23.54■■□□□ 1.36
LTBR-215ENST00000546296 TMC1Q8TDI8 760 aa23.54■■□□□ 1.36
LTBR-215ENST00000546296 SPATA31A6Q5VVP1 1343 aa23.54■■□□□ 1.36
LTBR-215ENST00000546296 ITSN1Q15811 1721 aa23.53■■□□□ 1.36
LTBR-215ENST00000546296 PUS7Q96PZ0 661 aaKnown RBP23.53■■□□□ 1.36
LTBR-215ENST00000546296 SPATA31A3Q5VYP0 1347 aa23.53■■□□□ 1.36
LTBR-215ENST00000546296 PNPLA6Q8IY17 1366 aa23.52■■□□□ 1.36
LTBR-215ENST00000546296 SBNO1A3KN83 1393 aa23.52■■□□□ 1.36
LTBR-215ENST00000546296 CDCA8Q53HL2 280 aa23.51■■□□□ 1.35
LTBR-215ENST00000546296 POLR3AO14802 1390 aaPredicted RBP23.51■■□□□ 1.35
LTBR-215ENST00000546296 PLEKHG5O94827 1062 aa23.49■■□□□ 1.35
LTBR-215ENST00000546296 MEX3CQ5U5Q3 659 aaKnown RBP23.49■■□□□ 1.35
LTBR-215ENST00000546296 TOPAZ1Q8N9V7 1692 aa23.48■■□□□ 1.35
LTBR-215ENST00000546296 DISP3Q9P2K9 1392 aa23.48■■□□□ 1.35
LTBR-215ENST00000546296 TNS3Q68CZ2 1445 aa23.48■■□□□ 1.35
LTBR-215ENST00000546296 ZNF692Q9BU19 519 aaPredicted RBP23.47■■□□□ 1.35
LTBR-215ENST00000546296 SLC12A5Q9H2X9 1139 aa23.47■■□□□ 1.35
LTBR-215ENST00000546296 SHPRHQ149N8 1683 aa23.47■■□□□ 1.35
LTBR-215ENST00000546296 ARHGEF10O15013 1369 aa23.46■■□□□ 1.35
LTBR-215ENST00000546296 PHF23Q9BUL5 403 aaPredicted RBP23.46■■□□□ 1.35
LTBR-215ENST00000546296 HAP1P54257 671 aaPredicted RBP23.44■■□□□ 1.34
LTBR-215ENST00000546296 HDGFL2Q7Z4V5 671 aaPredicted RBP23.44■■□□□ 1.34
LTBR-215ENST00000546296 POLR3GLQ9BT43 218 aa23.44■■□□□ 1.34
LTBR-215ENST00000546296 MED1Q15648 1581 aaPredicted RBP23.44■■□□□ 1.34
LTBR-215ENST00000546296 ADAMTS2O95450 1211 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms