RNA–Protein interactions for RNA: ENST00000545825.1

CCDC189-211, Transcript of coiled-coil domain containing 189, human

TSL 1 (best) BASIC

Gene CCDC189, Length 1,046 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC189-211	ENST00000545825	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.54	■■■□□ 2.8
CCDC189-211	ENST00000545825	PRAM1	Q96QH2	718 aa		32.52	■■■□□ 2.8
CCDC189-211	ENST00000545825	COL16A1	Q07092	1604 aa	Predicted RBP	32.51	■■■□□ 2.8
CCDC189-211	ENST00000545825	TRAK1	Q9UPV9	953 aa		32.5	■■■□□ 2.79
CCDC189-211	ENST00000545825	KIAA1210	Q9ULL0	1709 aa		32.5	■■■□□ 2.79
CCDC189-211	ENST00000545825	DISP3	Q9P2K9	1392 aa		32.48	■■■□□ 2.79
CCDC189-211	ENST00000545825	MED1	Q15648	1581 aa	Predicted RBP	32.48	■■■□□ 2.79
CCDC189-211	ENST00000545825	NHSL1	Q5SYE7	1610 aa		32.45	■■■□□ 2.79
CCDC189-211	ENST00000545825	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.45	■■■□□ 2.79
CCDC189-211	ENST00000545825	PCGF6	Q9BYE7	350 aa		32.45	■■■□□ 2.79
CCDC189-211	ENST00000545825	POGK	Q9P215	609 aa		32.45	■■■□□ 2.79
CCDC189-211	ENST00000545825	ORAI2	Q96SN7	254 aa		32.44	■■■□□ 2.78
CCDC189-211	ENST00000545825	NBPF1	Q3BBV0	1214 aa		32.43	■■■□□ 2.78
CCDC189-211	ENST00000545825	FMN2	Q9NZ56	1722 aa		32.42	■■■□□ 2.78
CCDC189-211	ENST00000545825	JCAD	Q9P266	1359 aa		32.41	■■■□□ 2.78
CCDC189-211	ENST00000545825	DDX17	Q92841	729 aa	Known RBP	32.4	■■■□□ 2.78
CCDC189-211	ENST00000545825	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.4	■■■□□ 2.78
CCDC189-211	ENST00000545825	ADGRB2	O60241	1585 aa		32.38	■■■□□ 2.77
CCDC189-211	ENST00000545825	NUTM2F	A1L443	756 aa		32.38	■■■□□ 2.77
CCDC189-211	ENST00000545825	ESCO1	Q5FWF5	840 aa		32.36	■■■□□ 2.77
CCDC189-211	ENST00000545825	TRPM1	Q7Z4N2	1603 aa		32.33	■■■□□ 2.77
CCDC189-211	ENST00000545825	TONSL	Q96HA7	1378 aa		32.32	■■■□□ 2.77
CCDC189-211	ENST00000545825	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.32	■■■□□ 2.76
CCDC189-211	ENST00000545825	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.32	■■■□□ 2.76
CCDC189-211	ENST00000545825	SHPRH	Q149N8	1683 aa		32.31	■■■□□ 2.76
CCDC189-211	ENST00000545825	SOS2	Q07890	1332 aa	Predicted RBP	32.29	■■■□□ 2.76
CCDC189-211	ENST00000545825	NBPF8	Q3BBV2	869 aa		32.28	■■■□□ 2.76
CCDC189-211	ENST00000545825	LRRC59	Q96AG4	307 aa	Known RBP	32.28	■■■□□ 2.76
CCDC189-211	ENST00000545825	USP32	Q8NFA0	1604 aa		32.26	■■■□□ 2.75
CCDC189-211	ENST00000545825	SPATA31A6	Q5VVP1	1343 aa		32.26	■■■□□ 2.75
CCDC189-211	ENST00000545825	NPHP3	Q7Z494	1330 aa		32.26	■■■□□ 2.75
CCDC189-211	ENST00000545825	ANKAR	Q7Z5J8	1434 aa		32.25	■■■□□ 2.75
CCDC189-211	ENST00000545825	RGPD8	O14715	1765 aa	Predicted RBP	32.24	■■■□□ 2.75
CCDC189-211	ENST00000545825	WASL	O00401	505 aa	Predicted RBP	32.24	■■■□□ 2.75
CCDC189-211	ENST00000545825	FOXO3	O43524	673 aa		32.24	■■■□□ 2.75
CCDC189-211	ENST00000545825	KIF1A	Q12756	1690 aa		32.24	■■■□□ 2.75
CCDC189-211	ENST00000545825	ROCK2	O75116	1388 aa	Known RBP	32.23	■■■□□ 2.75
CCDC189-211	ENST00000545825	PXDN	Q92626	1479 aa		32.23	■■■□□ 2.75
CCDC189-211	ENST00000545825	PHF23	Q9BUL5	403 aa	Predicted RBP	32.22	■■■□□ 2.75
CCDC189-211	ENST00000545825	LRP6	O75581	1613 aa		32.22	■■■□□ 2.75
CCDC189-211	ENST00000545825	TULP4	Q9NRJ4	1543 aa		32.21	■■■□□ 2.75
CCDC189-211	ENST00000545825	EIF3A	Q14152	1382 aa	Known RBP	32.2	■■■□□ 2.75
CCDC189-211	ENST00000545825	PNPLA6	Q8IY17	1366 aa		32.2	■■■□□ 2.75
CCDC189-211	ENST00000545825	PHF8	Q9UPP1	1060 aa		32.2	■■■□□ 2.75
CCDC189-211	ENST00000545825	PRR36	Q9H6K5	1346 aa		32.19	■■■□□ 2.74
CCDC189-211	ENST00000545825	XPC	Q01831	940 aa	Predicted RBP	32.18	■■■□□ 2.74
CCDC189-211	ENST00000545825	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.18	■■■□□ 2.74
CCDC189-211	ENST00000545825	GPRASP1	Q5JY77	1395 aa		32.18	■■■□□ 2.74
CCDC189-211	ENST00000545825	ILDR2	Q71H61	639 aa		32.17	■■■□□ 2.74
CCDC189-211	ENST00000545825	CLSPN	Q9HAW4	1339 aa		32.15	■■■□□ 2.74
CCDC189-211	ENST00000545825	RALGAPB	Q86X10	1494 aa		32.13	■■■□□ 2.73
CCDC189-211	ENST00000545825	RGS17	Q9UGC6	210 aa	Predicted RBP	32.13	■■■□□ 2.73
CCDC189-211	ENST00000545825	QRICH2	Q9H0J4	1663 aa		32.12	■■■□□ 2.73
CCDC189-211	ENST00000545825	ATP7B	P35670	1465 aa		32.12	■■■□□ 2.73
CCDC189-211	ENST00000545825	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.12	■■■□□ 2.73
CCDC189-211	ENST00000545825	NUTM2E	B1AL46	878 aa	Predicted RBP	32.12	■■■□□ 2.73
CCDC189-211	ENST00000545825	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.12	■■■□□ 2.73
CCDC189-211	ENST00000545825	CDK19	Q9BWU1	502 aa		32.12	■■■□□ 2.73
CCDC189-211	ENST00000545825	PMFBP1	Q8TBY8	1022 aa		32.11	■■■□□ 2.73
CCDC189-211	ENST00000545825	KRT28	Q7Z3Y7	464 aa		32.09	■■■□□ 2.73
CCDC189-211	ENST00000545825	NUDT16	Q96DE0	195 aa	Known RBP	32.08	■■■□□ 2.73
CCDC189-211	ENST00000545825	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.08	■■■□□ 2.73
CCDC189-211	ENST00000545825	MEX3C	Q5U5Q3	659 aa	Known RBP	32.06	■■■□□ 2.72
CCDC189-211	ENST00000545825	SPATA31A3	Q5VYP0	1347 aa		32.05	■■■□□ 2.72
CCDC189-211	ENST00000545825	CARD11	Q9BXL7	1154 aa		32.05	■■■□□ 2.72
CCDC189-211	ENST00000545825	ITSN1	Q15811	1721 aa		32.04	■■■□□ 2.72
CCDC189-211	ENST00000545825	PSME1	Q06323	249 aa		32.04	■■■□□ 2.72
CCDC189-211	ENST00000545825	SBNO1	A3KN83	1393 aa		32.02	■■■□□ 2.72
CCDC189-211	ENST00000545825	TOPAZ1	Q8N9V7	1692 aa		32.02	■■■□□ 2.72
CCDC189-211	ENST00000545825	TNS3	Q68CZ2	1445 aa		32	■■■□□ 2.71
CCDC189-211	ENST00000545825	CCER1	Q8TC90	406 aa	Predicted RBP	32	■■■□□ 2.71
CCDC189-211	ENST00000545825	CCDC61	Q9Y6R9	512 aa		32	■■■□□ 2.71
CCDC189-211	ENST00000545825	SRPK2	P78362	688 aa	Known RBP	31.99	■■■□□ 2.71
CCDC189-211	ENST00000545825	TIMELESS	Q9UNS1	1208 aa		31.99	■■■□□ 2.71
CCDC189-211	ENST00000545825	NGDN	Q8NEJ9	315 aa	Known RBP	31.98	■■■□□ 2.71
CCDC189-211	ENST00000545825	CABP2	Q9NPB3	220 aa		31.98	■■■□□ 2.71
CCDC189-211	ENST00000545825	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.97	■■■□□ 2.71
CCDC189-211	ENST00000545825	POTEA	Q6S8J7	498 aa		31.96	■■■□□ 2.71
CCDC189-211	ENST00000545825	ADAMTS2	O95450	1211 aa		31.95	■■■□□ 2.71
CCDC189-211	ENST00000545825	EVC2	Q86UK5	1308 aa		31.95	■■■□□ 2.7
CCDC189-211	ENST00000545825	PLEKHG3	A1L390	1219 aa		31.94	■■■□□ 2.7
CCDC189-211	ENST00000545825	POLR3A	O14802	1390 aa	Predicted RBP	31.94	■■■□□ 2.7
CCDC189-211	ENST00000545825	SBNO2	Q9Y2G9	1366 aa		31.94	■■■□□ 2.7
CCDC189-211	ENST00000545825	C8orf37	Q96NL8	207 aa		31.92	■■■□□ 2.7
CCDC189-211	ENST00000545825	ARHGEF10	O15013	1369 aa		31.92	■■■□□ 2.7
CCDC189-211	ENST00000545825	PPIP5K1	Q6PFW1	1433 aa		31.92	■■■□□ 2.7
CCDC189-211	ENST00000545825	ACE	P12821	1306 aa		31.91	■■■□□ 2.7
CCDC189-211	ENST00000545825	AFF2	P51816	1311 aa		31.9	■■■□□ 2.7
CCDC189-211	ENST00000545825	ZNF772	Q68DY9	489 aa	Predicted RBP	31.89	■■■□□ 2.7
CCDC189-211	ENST00000545825	LMOD2	Q6P5Q4	547 aa		31.89	■■■□□ 2.7
CCDC189-211	ENST00000545825	ALS2	Q96Q42	1657 aa		31.89	■■■□□ 2.7
CCDC189-211	ENST00000545825	NGLY1	Q96IV0	654 aa		31.85	■■■□□ 2.69
CCDC189-211	ENST00000545825	CABLES1	Q8TDN4	633 aa		31.84	■■■□□ 2.69
CCDC189-211	ENST00000545825	PAK3	O75914	559 aa	Predicted RBP	31.83	■■■□□ 2.69
CCDC189-211	ENST00000545825	CABP1	Q9NZU7	370 aa		31.83	■■■□□ 2.69
CCDC189-211	ENST00000545825	MARF1	Q9Y4F3	1742 aa	Known RBP	31.83	■■■□□ 2.69
CCDC189-211	ENST00000545825	ABCA3	Q99758	1704 aa		31.82	■■■□□ 2.68
CCDC189-211	ENST00000545825	ST20-MTHFS	A0A0A6YYL1	179 aa		31.8	■■■□□ 2.68
CCDC189-211	ENST00000545825	PLEKHG5	O94827	1062 aa		31.8	■■■□□ 2.68
CCDC189-211	ENST00000545825	SOCS7	O14512	581 aa		31.79	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms