RNA–Protein interactions for RNA: ENST00000545328.6

SEC23A-203, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-203ENST00000545328 EFCAB6Q5THR3 1501 aa21.82■■□□□ 1.08
SEC23A-203ENST00000545328 RLBP1P12271 317 aa21.81■■□□□ 1.08
SEC23A-203ENST00000545328 ASXL2Q76L83 1435 aa21.81■■□□□ 1.08
SEC23A-203ENST00000545328 RUNDC1Q96C34 613 aa21.8■■□□□ 1.08
SEC23A-203ENST00000545328 CGNL1Q0VF96 1302 aa21.8■■□□□ 1.08
SEC23A-203ENST00000545328 POLR3AO14802 1390 aaPredicted RBP21.8■■□□□ 1.08
SEC23A-203ENST00000545328 ARAP3Q8WWN8 1544 aa21.8■■□□□ 1.08
SEC23A-203ENST00000545328 CABP2Q9NPB3 220 aa21.79■■□□□ 1.08
SEC23A-203ENST00000545328 STK26Q9P289 416 aa21.79■■□□□ 1.08
SEC23A-203ENST00000545328 FRAT2O75474 233 aaPredicted RBP21.79■■□□□ 1.08
SEC23A-203ENST00000545328 U2AF1L5P0DN76 240 aaPredicted RBP21.79■■□□□ 1.08
SEC23A-203ENST00000545328 U2AF1Q01081 240 aaKnown RBP eCLIP21.79■■□□□ 1.082e-9■■■□□ 16
SEC23A-203ENST00000545328 SLC24A1O60721 1099 aa21.79■■□□□ 1.08
SEC23A-203ENST00000545328 RARSP54136 660 aaKnown RBP21.78■■□□□ 1.08
SEC23A-203ENST00000545328 PDE3AQ14432 1141 aa21.78■■□□□ 1.08
SEC23A-203ENST00000545328 KIDINS220Q9ULH0 1771 aa21.78■■□□□ 1.08
SEC23A-203ENST00000545328 C14orf93Q9H972 538 aaKnown RBP21.76■■□□□ 1.07
SEC23A-203ENST00000545328 PCDHB15Q9Y5E8 787 aa21.76■■□□□ 1.07
SEC23A-203ENST00000545328 NPATQ14207 1427 aa21.76■■□□□ 1.07
SEC23A-203ENST00000545328 IFT172Q9UG01 1749 aa21.75■■□□□ 1.07
SEC23A-203ENST00000545328 U2SURPO15042 1029 aaKnown RBP21.74■■□□□ 1.07
SEC23A-203ENST00000545328 GSE1Q14687 1217 aa21.74■■□□□ 1.07
SEC23A-203ENST00000545328 TSR2Q969E8 191 aaKnown RBP21.74■■□□□ 1.07
SEC23A-203ENST00000545328 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.74■■□□□ 1.07
SEC23A-203ENST00000545328 BRPF3Q9ULD4 1205 aa21.74■■□□□ 1.07
SEC23A-203ENST00000545328 QRICH2Q9H0J4 1663 aa21.74■■□□□ 1.07
SEC23A-203ENST00000545328 CFAP53Q96M91 514 aa21.73■■□□□ 1.07
SEC23A-203ENST00000545328 SLKQ9H2G2 1235 aaPredicted RBP21.73■■□□□ 1.07
SEC23A-203ENST00000545328 SHPRHQ149N8 1683 aa21.73■■□□□ 1.07
SEC23A-203ENST00000545328 RAPGEF3O95398 923 aa21.72■■□□□ 1.07
SEC23A-203ENST00000545328 NPM1P06748 294 aaKnown RBP eCLIP21.71■■□□□ 1.07
SEC23A-203ENST00000545328 USP19O94966 1318 aa21.71■■□□□ 1.07
SEC23A-203ENST00000545328 GGNBP2Q9H3C7 697 aa21.71■■□□□ 1.07
SEC23A-203ENST00000545328 ADGRB3O60242 1522 aa21.71■■□□□ 1.07
SEC23A-203ENST00000545328 SBNO2Q9Y2G9 1366 aa21.71■■□□□ 1.07
SEC23A-203ENST00000545328 NRXN1Q9ULB1 1477 aa21.69■■□□□ 1.06
SEC23A-203ENST00000545328 SRPK2P78362 688 aaKnown RBP21.69■■□□□ 1.06
SEC23A-203ENST00000545328 NGEFQ8N5V2 710 aa21.69■■□□□ 1.06
SEC23A-203ENST00000545328 ZNF518AQ6AHZ1 1483 aa21.69■■□□□ 1.06
SEC23A-203ENST00000545328 PDZRN3Q9UPQ7 1066 aa21.68■■□□□ 1.06
SEC23A-203ENST00000545328 MYO3AQ8NEV4 1616 aa21.67■■□□□ 1.06
SEC23A-203ENST00000545328 EVC2Q86UK5 1308 aa21.67■■□□□ 1.06
SEC23A-203ENST00000545328 MAPK8IP3Q9UPT6 1336 aa21.67■■□□□ 1.06
SEC23A-203ENST00000545328 SPRYD3Q8NCJ5 442 aa21.67■■□□□ 1.06
SEC23A-203ENST00000545328 FTSJ3Q8IY81 847 aaKnown RBP21.66■■□□□ 1.06
SEC23A-203ENST00000545328 ADGRB1O14514 1584 aa21.65■■□□□ 1.06
SEC23A-203ENST00000545328 PPLO60437 1756 aa21.65■■□□□ 1.06
SEC23A-203ENST00000545328 MINK1Q8N4C8 1332 aaPredicted RBP21.65■■□□□ 1.06
SEC23A-203ENST00000545328 WDR63Q8IWG1 891 aa21.64■■□□□ 1.06
SEC23A-203ENST00000545328 NEURL4Q96JN8 1562 aa21.64■■□□□ 1.06
SEC23A-203ENST00000545328 PMFBP1Q8TBY8 1022 aa21.64■■□□□ 1.05
SEC23A-203ENST00000545328 IQSEC2Q5JU85 1478 aa21.64■■□□□ 1.05
SEC23A-203ENST00000545328 CD109Q6YHK3 1445 aa21.64■■□□□ 1.05
SEC23A-203ENST00000545328 EXOSC9Q06265 439 aaKnown RBP21.63■■□□□ 1.05
SEC23A-203ENST00000545328 MYH16Q9H6N6 1097 aa21.63■■□□□ 1.05
SEC23A-203ENST00000545328 SMC4Q9NTJ3 1288 aa21.63■■□□□ 1.05
SEC23A-203ENST00000545328 SETBP1Q9Y6X0 1596 aa21.62■■□□□ 1.05
SEC23A-203ENST00000545328 NINLQ9Y2I6 1382 aa21.62■■□□□ 1.05
SEC23A-203ENST00000545328 PHF23Q9BUL5 403 aaPredicted RBP21.62■■□□□ 1.05
SEC23A-203ENST00000545328 ZC3H13Q5T200 1668 aaKnown RBP21.62■■□□□ 1.05
SEC23A-203ENST00000545328 FRMPD1Q5SYB0 1578 aa21.6■■□□□ 1.05
SEC23A-203ENST00000545328 VGFO15240 615 aaPredicted RBP21.6■■□□□ 1.05
SEC23A-203ENST00000545328 FBLN1P23142 703 aa21.6■■□□□ 1.05
SEC23A-203ENST00000545328 IDI1Q13907 227 aa21.6■■□□□ 1.05
SEC23A-203ENST00000545328 TULP4Q9NRJ4 1543 aa21.6■■□□□ 1.05
SEC23A-203ENST00000545328 GLI2P10070 1586 aa21.6■■□□□ 1.05
SEC23A-203ENST00000545328 ANKRD36BQ8N2N9 1353 aa21.59■■□□□ 1.05
SEC23A-203ENST00000545328 ZKSCAN2Q63HK3 967 aa21.59■■□□□ 1.05
SEC23A-203ENST00000545328 ITPRIPQ8IWB1 547 aa21.59■■□□□ 1.05
SEC23A-203ENST00000545328 LMTK2Q8IWU2 1503 aa21.59■■□□□ 1.05
SEC23A-203ENST00000545328 POGZQ7Z3K3 1410 aa21.59■■□□□ 1.05
SEC23A-203ENST00000545328 A0A1W2PP64 1363 aa21.58■■□□□ 1.05
SEC23A-203ENST00000545328 MVPQ14764 893 aaKnown RBP21.58■■□□□ 1.05
SEC23A-203ENST00000545328 ARXQ96QS3 562 aa21.58■■□□□ 1.05
SEC23A-203ENST00000545328 RWDD1Q9H446 243 aaPredicted RBP21.58■■□□□ 1.05
SEC23A-203ENST00000545328 DZIP1LQ8IYY4 767 aaKnown RBP21.58■■□□□ 1.05
SEC23A-203ENST00000545328 UPF2Q9HAU5 1272 aaKnown RBP21.57■■□□□ 1.04
SEC23A-203ENST00000545328 VIRMAQ69YN4 1812 aaKnown RBP21.57■■□□□ 1.04
SEC23A-203ENST00000545328 EIF5BO60841 1220 aaKnown RBP21.57■■□□□ 1.04
SEC23A-203ENST00000545328 BECN1Q14457 450 aa21.57■■□□□ 1.04
SEC23A-203ENST00000545328 POGKQ9P215 609 aa21.56■■□□□ 1.04
SEC23A-203ENST00000545328 SSH1Q8WYL5 1049 aa21.56■■□□□ 1.04
SEC23A-203ENST00000545328 ABCC3O15438 1527 aa21.55■■□□□ 1.04
SEC23A-203ENST00000545328 RPGRIP1LQ68CZ1 1315 aa21.55■■□□□ 1.04
SEC23A-203ENST00000545328 SIGLEC1Q9BZZ2 1709 aa21.55■■□□□ 1.04
SEC23A-203ENST00000545328 TMPOP42166 694 aaKnown RBP21.55■■□□□ 1.04
SEC23A-203ENST00000545328 PRAM1Q96QH2 718 aa21.55■■□□□ 1.04
SEC23A-203ENST00000545328 TRIM27P14373 513 aa21.55■■□□□ 1.04
SEC23A-203ENST00000545328 CCDC27Q2M243 656 aa21.55■■□□□ 1.04
SEC23A-203ENST00000545328 MFAP1P55081 439 aaKnown RBP21.54■■□□□ 1.04
SEC23A-203ENST00000545328 RIPK4P57078 832 aa21.53■■□□□ 1.04
SEC23A-203ENST00000545328 TRIM35Q9UPQ4 493 aa21.53■■□□□ 1.04
SEC23A-203ENST00000545328 ARHGEF28Q8N1W1 1705 aaKnown RBP21.52■■□□□ 1.04
SEC23A-203ENST00000545328 CAMSAP1Q5T5Y3 1602 aa21.52■■□□□ 1.04
SEC23A-203ENST00000545328 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.52■■□□□ 1.047e-7■□□□□ 10.5
SEC23A-203ENST00000545328 NOB1Q9ULX3 412 aaKnown RBP21.52■■□□□ 1.04
SEC23A-203ENST00000545328 NLRP1Q9C000 1473 aa21.52■■□□□ 1.04
SEC23A-203ENST00000545328 HECW2Q9P2P5 1572 aa21.51■■□□□ 1.03
SEC23A-203ENST00000545328 FYB1O15117 783 aa21.51■■□□□ 1.03
SEC23A-203ENST00000545328 TBC1D2Q9BYX2 928 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms