RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 TMEM259Q4ZIN3 620 aa11.71□□□□□ -0.53
COPA-206ENST00000545266 BRICD5Q6PL45 260 aa11.71□□□□□ -0.53
COPA-206ENST00000545266 SCUBE3Q8IX30 993 aa11.71□□□□□ -0.53
COPA-206ENST00000545266 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
COPA-206ENST00000545266 CABLES1Q8TDN4 633 aa11.71□□□□□ -0.53
COPA-206ENST00000545266 CSPP1Q1MSJ5 1256 aa11.7□□□□□ -0.54
COPA-206ENST00000545266 BLOC1S3Q6QNY0 202 aa11.7□□□□□ -0.54
COPA-206ENST00000545266 ERICH6Q7L0X2 663 aa11.7□□□□□ -0.54
COPA-206ENST00000545266 PTPN5P54829 565 aa11.69□□□□□ -0.54
COPA-206ENST00000545266 FLIIQ13045 1269 aa11.68□□□□□ -0.54
COPA-206ENST00000545266 RNF166Q96A37 237 aaPredicted RBP11.68□□□□□ -0.54
COPA-206ENST00000545266 SOCS7O14512 581 aa11.67□□□□□ -0.54
COPA-206ENST00000545266 TJAP1Q5JTD0 557 aa11.67□□□□□ -0.54
COPA-206ENST00000545266 RETREG3Q86VR2 466 aa11.67□□□□□ -0.54
COPA-206ENST00000545266 HCSTQ9UBK5 93 aa11.67□□□□□ -0.54
COPA-206ENST00000545266 NUTM2BA6NNL0 878 aaPredicted RBP11.65□□□□□ -0.54
COPA-206ENST00000545266 NUTM2EB1AL46 878 aaPredicted RBP11.65□□□□□ -0.54
COPA-206ENST00000545266 C6orf229H3BNL8 230 aa11.65□□□□□ -0.54
COPA-206ENST00000545266 NUTM2DQ5VT03 806 aaPredicted RBP11.65□□□□□ -0.54
COPA-206ENST00000545266 DESI1Q6ICB0 168 aa11.65□□□□□ -0.54
COPA-206ENST00000545266 RNF19BQ6ZMZ0 732 aa11.65□□□□□ -0.54
COPA-206ENST00000545266 NUTM2AQ8IVF1 878 aaPredicted RBP11.65□□□□□ -0.54
COPA-206ENST00000545266 SYMPKQ92797 1274 aaKnown RBP11.65□□□□□ -0.54
COPA-206ENST00000545266 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.54
COPA-206ENST00000545266 CFAP99D6REC4 459 aa11.64□□□□□ -0.55
COPA-206ENST00000545266 FMNL1O95466 1100 aaPredicted RBP11.64□□□□□ -0.55
COPA-206ENST00000545266 MTRQ99707 1265 aa11.64□□□□□ -0.55
COPA-206ENST00000545266 MCM6Q14566 821 aa11.63□□□□□ -0.55
COPA-206ENST00000545266 USB1Q9BQ65 265 aaKnown RBP11.63□□□□□ -0.55
COPA-206ENST00000545266 ZPR1O75312 459 aa11.62□□□□□ -0.55
COPA-206ENST00000545266 IL21Q9HBE4 155 aa11.62□□□□□ -0.55
COPA-206ENST00000545266 COPS2P61201 443 aa11.61□□□□□ -0.55
COPA-206ENST00000545266 MMRN1Q13201 1228 aa11.61□□□□□ -0.55
COPA-206ENST00000545266 PRR7Q8TB68 274 aa11.61□□□□□ -0.55
COPA-206ENST00000545266 TIMELESSQ9UNS1 1208 aa11.61□□□□□ -0.55
COPA-206ENST00000545266 MSS51Q4VC12 460 aa11.6□□□□□ -0.55
COPA-206ENST00000545266 ITGBL1O95965 494 aaPredicted RBP11.59□□□□□ -0.55
COPA-206ENST00000545266 FAM160A2Q8N612 972 aaPredicted RBP11.59□□□□□ -0.55
COPA-206ENST00000545266 AP1G2O75843 785 aa11.58□□□□□ -0.56
COPA-206ENST00000545266 SPSB2Q99619 263 aa11.58□□□□□ -0.56
COPA-206ENST00000545266 SNRKQ9NRH2 765 aa11.58□□□□□ -0.56
COPA-206ENST00000545266 CTDSPL2Q05D32 466 aa11.57□□□□□ -0.56
COPA-206ENST00000545266 HELBQ8NG08 1087 aaPredicted RBP11.57□□□□□ -0.56
COPA-206ENST00000545266 ADH1BP00325 375 aa11.56□□□□□ -0.56
COPA-206ENST00000545266 USP17L8P0C7I0 530 aa11.56□□□□□ -0.56
COPA-206ENST00000545266 MMP16P51512 607 aa11.56□□□□□ -0.56
COPA-206ENST00000545266 MTMR14Q8NCE2 650 aa11.56□□□□□ -0.56
COPA-206ENST00000545266 ZNF516Q92618 1163 aa11.56□□□□□ -0.56
COPA-206ENST00000545266 LYPD8Q6UX82 237 aa11.55□□□□□ -0.56
COPA-206ENST00000545266 C14orf37Q86TY3 774 aa11.55□□□□□ -0.56
COPA-206ENST00000545266 DXOO77932 396 aaKnown RBP11.54□□□□□ -0.56
COPA-206ENST00000545266 JUNDP17535 347 aa11.54□□□□□ -0.56
COPA-206ENST00000545266 TLL1O43897 1013 aa11.52□□□□□ -0.57
COPA-206ENST00000545266 GJD4Q96KN9 370 aaPredicted RBP11.52□□□□□ -0.57
COPA-206ENST00000545266 PER1O15534 1290 aaPredicted RBP11.51□□□□□ -0.57
COPA-206ENST00000545266 A6NJR5 290 aa11.5□□□□□ -0.57
COPA-206ENST00000545266 PTPRNQ16849 979 aa11.5□□□□□ -0.57
COPA-206ENST00000545266 ZMYND15Q9H091 742 aa11.5□□□□□ -0.57
COPA-206ENST00000545266 APBB1O00213 710 aa11.49□□□□□ -0.57
COPA-206ENST00000545266 KCNC4Q03721 635 aa11.49□□□□□ -0.57
COPA-206ENST00000545266 NKX2-3Q8TAU0 364 aa11.49□□□□□ -0.57
COPA-206ENST00000545266 LRRN4Q8WUT4 740 aa11.49□□□□□ -0.57
COPA-206ENST00000545266 TRIM34Q9BYJ4 488 aa11.49□□□□□ -0.57
COPA-206ENST00000545266 HMX1Q9NP08 348 aaPredicted RBP11.49□□□□□ -0.57
COPA-206ENST00000545266 F12P00748 615 aaPredicted RBP11.47□□□□□ -0.57
COPA-206ENST00000545266 IFFO2Q5TF58 517 aa11.47□□□□□ -0.57
COPA-206ENST00000545266 SLC6A16Q9GZN6 736 aa11.47□□□□□ -0.57
COPA-206ENST00000545266 PRDM9Q9NQV7 894 aa11.47□□□□□ -0.57
COPA-206ENST00000545266 UBTFP17480 764 aaKnown RBP11.46□□□□□ -0.57
COPA-206ENST00000545266 TSC1Q92574 1164 aa11.46□□□□□ -0.57
COPA-206ENST00000545266 COG6Q9Y2V7 657 aa11.46□□□□□ -0.57
COPA-206ENST00000545266 EVA1BQ9NVM1 165 aa11.45□□□□□ -0.58
COPA-206ENST00000545266 GPR37L1O60883 481 aa11.44□□□□□ -0.58
COPA-206ENST00000545266 POM121Q96HA1 1249 aa11.44□□□□□ -0.58
COPA-206ENST00000545266 CCNYL3P0C7X3 344 aa11.43□□□□□ -0.58
COPA-206ENST00000545266 FNBP4Q8N3X1 1017 aaPredicted RBP11.43□□□□□ -0.58
COPA-206ENST00000545266 CLUAP1Q96AJ1 413 aa11.42□□□□□ -0.58
COPA-206ENST00000545266 S1PR4O95977 384 aa11.41□□□□□ -0.58
COPA-206ENST00000545266 EPS8L1Q8TE68 723 aa11.41□□□□□ -0.58
COPA-206ENST00000545266 NUDT12Q9BQG2 462 aa11.41□□□□□ -0.58
COPA-206ENST00000545266 NDUFB9Q9Y6M9 179 aa11.41□□□□□ -0.58
COPA-206ENST00000545266 RAD21O60216 631 aa11.4□□□□□ -0.58
COPA-206ENST00000545266 NR6A1Q15406 480 aa11.4□□□□□ -0.58
COPA-206ENST00000545266 PRM3Q9NNZ6 103 aa11.4□□□□□ -0.58
COPA-206ENST00000545266 KCNH2Q12809 1159 aa11.39□□□□□ -0.59
COPA-206ENST00000545266 GDPD2Q9HCC8 539 aa11.39□□□□□ -0.59
COPA-206ENST00000545266 TBC1D2BQ9UPU7 963 aa11.39□□□□□ -0.59
COPA-206ENST00000545266 MAP10Q9P2G4 905 aa11.37□□□□□ -0.59
COPA-206ENST00000545266 TRAK2O60296 914 aa11.36□□□□□ -0.59
COPA-206ENST00000545266 IRF5Q13568 498 aa11.36□□□□□ -0.59
COPA-206ENST00000545266 PROSER2Q86WR7 435 aaPredicted RBP11.36□□□□□ -0.59
COPA-206ENST00000545266 ZC3H4Q9UPT8 1303 aaKnown RBP11.35□□□□□ -0.59
COPA-206ENST00000545266 RNF223E7ERA6 249 aa11.35□□□□□ -0.59
COPA-206ENST00000545266 ANKLE1Q8NAG6 615 aa11.35□□□□□ -0.59
COPA-206ENST00000545266 PTCRAQ6ISU1 281 aaPredicted RBP11.34□□□□□ -0.59
COPA-206ENST00000545266 FKBPLQ9UIM3 349 aa11.34□□□□□ -0.59
COPA-206ENST00000545266 FCF1Q9Y324 198 aaKnown RBP11.34□□□□□ -0.59
COPA-206ENST00000545266 GGCXP38435 758 aa11.33□□□□□ -0.6
COPA-206ENST00000545266 PPP1R18Q6NYC8 613 aa11.33□□□□□ -0.6
COPA-206ENST00000545266 PNMA1Q8ND90 353 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms