RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 STRCQ7RTU9 1775 aa22.11■■□□□ 1.13
XRCC1-202ENST00000543982 MIER1Q8N108 512 aa22.1■■□□□ 1.13
XRCC1-202ENST00000543982 KNDC1Q76NI1 1749 aa22.1■■□□□ 1.13
XRCC1-202ENST00000543982 XRN1Q8IZH2 1706 aaKnown RBP22.09■■□□□ 1.13
XRCC1-202ENST00000543982 CDK19Q9BWU1 502 aa22.09■■□□□ 1.13
XRCC1-202ENST00000543982 EVC2Q86UK5 1308 aa22.09■■□□□ 1.13
XRCC1-202ENST00000543982 PTCH1Q13635 1447 aa22.07■■□□□ 1.12
XRCC1-202ENST00000543982 CDCA8Q53HL2 280 aa22.06■■□□□ 1.12
XRCC1-202ENST00000543982 SLC12A5Q9H2X9 1139 aa22.06■■□□□ 1.12
XRCC1-202ENST00000543982 PANK3Q9H999 370 aa22.06■■□□□ 1.12
XRCC1-202ENST00000543982 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.06■■□□□ 1.12
XRCC1-202ENST00000543982 SLC24A1O60721 1099 aa22.05■■□□□ 1.12
XRCC1-202ENST00000543982 CHD2O14647 1828 aaKnown RBP22.05■■□□□ 1.12
XRCC1-202ENST00000543982 SRPK2P78362 688 aaKnown RBP22.05■■□□□ 1.12
XRCC1-202ENST00000543982 WASLO00401 505 aaPredicted RBP22.04■■□□□ 1.12
XRCC1-202ENST00000543982 PER1O15534 1290 aaPredicted RBP22.02■■□□□ 1.12
XRCC1-202ENST00000543982 TMC1Q8TDI8 760 aa22.01■■□□□ 1.11
XRCC1-202ENST00000543982 PUS7Q96PZ0 661 aaKnown RBP22■■□□□ 1.11
XRCC1-202ENST00000543982 CARD14Q9BXL6 1004 aa22■■□□□ 1.11
XRCC1-202ENST00000543982 PRR36Q9H6K5 1346 aa22■■□□□ 1.11
XRCC1-202ENST00000543982 NUTM2FA1L443 756 aa21.99■■□□□ 1.11
XRCC1-202ENST00000543982 CNGB1Q14028 1251 aaPredicted RBP21.99■■□□□ 1.11
XRCC1-202ENST00000543982 MYOM1P52179 1685 aa21.99■■□□□ 1.11
XRCC1-202ENST00000543982 ZNF335Q9H4Z2 1342 aaPredicted RBP21.98■■□□□ 1.11
XRCC1-202ENST00000543982 PROSER2Q86WR7 435 aaPredicted RBP21.98■■□□□ 1.11
XRCC1-202ENST00000543982 STRCP1A6NGW2 1772 aa21.97■■□□□ 1.11
XRCC1-202ENST00000543982 NWD1Q149M9 1564 aa21.97■■□□□ 1.11
XRCC1-202ENST00000543982 CABP1Q9NZU7 370 aa21.96■■□□□ 1.11
XRCC1-202ENST00000543982 NUDT16Q96DE0 195 aaKnown RBP21.96■■□□□ 1.11
XRCC1-202ENST00000543982 ADGRB2O60241 1585 aa21.93■■□□□ 1.1
XRCC1-202ENST00000543982 ATAD2Q6PL18 1390 aa21.93■■□□□ 1.1
XRCC1-202ENST00000543982 CD163L1Q9NR16 1453 aa21.91■■□□□ 1.1
XRCC1-202ENST00000543982 TMEM94Q12767 1356 aa21.9■■□□□ 1.1
XRCC1-202ENST00000543982 ANP32CO43423 234 aa21.9■■□□□ 1.1
XRCC1-202ENST00000543982 ATP7BP35670 1465 aa21.9■■□□□ 1.1
XRCC1-202ENST00000543982 NKTRP30414 1462 aaKnown RBP21.89■■□□□ 1.09
XRCC1-202ENST00000543982 AMER1Q5JTC6 1135 aaPredicted RBP21.88■■□□□ 1.09
XRCC1-202ENST00000543982 PRKRIP1Q9H875 184 aaPredicted RBP21.88■■□□□ 1.09
XRCC1-202ENST00000543982 CCDC61Q9Y6R9 512 aa21.88■■□□□ 1.09
XRCC1-202ENST00000543982 ADGRL3Q9HAR2 1447 aa21.88■■□□□ 1.09
XRCC1-202ENST00000543982 NALCNQ8IZF0 1738 aa21.88■■□□□ 1.09
XRCC1-202ENST00000543982 A0A1W2PP64 1363 aa21.87■■□□□ 1.09
XRCC1-202ENST00000543982 C14orf37Q86TY3 774 aa21.87■■□□□ 1.09
XRCC1-202ENST00000543982 PPIP5K1Q6PFW1 1433 aa21.87■■□□□ 1.09
XRCC1-202ENST00000543982 CC2D1BQ5T0F9 858 aaKnown RBP21.87■■□□□ 1.09
XRCC1-202ENST00000543982 DMRT2Q9Y5R5 561 aa21.87■■□□□ 1.09
XRCC1-202ENST00000543982 ANKRD36BQ8N2N9 1353 aa21.86■■□□□ 1.09
XRCC1-202ENST00000543982 KNSTRNQ9Y448 316 aa21.85■■□□□ 1.09
XRCC1-202ENST00000543982 USP32Q8NFA0 1604 aa21.85■■□□□ 1.09
XRCC1-202ENST00000543982 AEBP2Q6ZN18 517 aaPredicted RBP21.84■■□□□ 1.09
XRCC1-202ENST00000543982 NSD3Q9BZ95 1437 aa21.84■■□□□ 1.09
XRCC1-202ENST00000543982 CCDC184Q52MB2 194 aa21.83■■□□□ 1.09
XRCC1-202ENST00000543982 PMFBP1Q8TBY8 1022 aa21.83■■□□□ 1.09
XRCC1-202ENST00000543982 LRRC7Q96NW7 1537 aa21.83■■□□□ 1.08
XRCC1-202ENST00000543982 C19orf44Q9H6X5 657 aa21.83■■□□□ 1.08
XRCC1-202ENST00000543982 NINLQ9Y2I6 1382 aa21.83■■□□□ 1.08
XRCC1-202ENST00000543982 PLEKHG3A1L390 1219 aa21.81■■□□□ 1.08
XRCC1-202ENST00000543982 CPSF1Q10570 1443 aaKnown RBP21.81■■□□□ 1.08
XRCC1-202ENST00000543982 CDC42BPGQ6DT37 1551 aa21.8■■□□□ 1.08
XRCC1-202ENST00000543982 TERF2IPQ9NYB0 399 aa21.8■■□□□ 1.08
XRCC1-202ENST00000543982 ACEP12821 1306 aa21.8■■□□□ 1.08
XRCC1-202ENST00000543982 FMN2Q9NZ56 1722 aa21.78■■□□□ 1.08
XRCC1-202ENST00000543982 HDGFL2Q7Z4V5 671 aaPredicted RBP21.78■■□□□ 1.08
XRCC1-202ENST00000543982 ORAI2Q96SN7 254 aa21.78■■□□□ 1.08
XRCC1-202ENST00000543982 ANKARQ7Z5J8 1434 aa21.77■■□□□ 1.08
XRCC1-202ENST00000543982 NCOA3Q9Y6Q9 1424 aa21.76■■□□□ 1.07
XRCC1-202ENST00000543982 RGPD8O14715 1765 aaPredicted RBP21.76■■□□□ 1.07
XRCC1-202ENST00000543982 KTN1Q86UP2 1357 aaKnown RBP21.76■■□□□ 1.07
XRCC1-202ENST00000543982 PARD3Q8TEW0 1356 aa21.76■■□□□ 1.07
XRCC1-202ENST00000543982 TOPAZ1Q8N9V7 1692 aa21.76■■□□□ 1.07
XRCC1-202ENST00000543982 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.76■■□□□ 1.07
XRCC1-202ENST00000543982 XIRP1Q702N8 1843 aaKnown RBP21.75■■□□□ 1.07
XRCC1-202ENST00000543982 FYB1O15117 783 aa21.74■■□□□ 1.07
XRCC1-202ENST00000543982 ESCO1Q5FWF5 840 aa21.74■■□□□ 1.07
XRCC1-202ENST00000543982 ZRANB1Q9UGI0 708 aa21.74■■□□□ 1.07
XRCC1-202ENST00000543982 NPC1L1Q9UHC9 1359 aa21.74■■□□□ 1.07
XRCC1-202ENST00000543982 GGNBP2Q9H3C7 697 aa21.73■■□□□ 1.07
XRCC1-202ENST00000543982 ATF3P18847 181 aa21.72■■□□□ 1.07
XRCC1-202ENST00000543982 PHF8Q9UPP1 1060 aa21.72■■□□□ 1.07
XRCC1-202ENST00000543982 C1orf167Q5SNV9 1468 aa21.72■■□□□ 1.07
XRCC1-202ENST00000543982 POLR3AO14802 1390 aaPredicted RBP21.72■■□□□ 1.07
XRCC1-202ENST00000543982 CGNL1Q0VF96 1302 aa21.72■■□□□ 1.07
XRCC1-202ENST00000543982 RALBP1Q15311 655 aa21.72■■□□□ 1.07
XRCC1-202ENST00000543982 NGDNQ8NEJ9 315 aaKnown RBP21.72■■□□□ 1.07
XRCC1-202ENST00000543982 MST1RQ04912 1400 aa21.71■■□□□ 1.07
XRCC1-202ENST00000543982 CCER2I3L3R5 266 aa21.7■■□□□ 1.07
XRCC1-202ENST00000543982 NME9Q86XW9 330 aa21.7■■□□□ 1.07
XRCC1-202ENST00000543982 ZNF692Q9BU19 519 aaPredicted RBP21.7■■□□□ 1.07
XRCC1-202ENST00000543982 MSH6P52701 1360 aa21.7■■□□□ 1.06
XRCC1-202ENST00000543982 LTBP4Q8N2S1 1624 aa21.7■■□□□ 1.06
XRCC1-202ENST00000543982 SSH2Q76I76 1423 aa21.69■■□□□ 1.06
XRCC1-202ENST00000543982 USP6P35125 1406 aa21.68■■□□□ 1.06
XRCC1-202ENST00000543982 TTC21BQ7Z4L5 1316 aa21.68■■□□□ 1.06
XRCC1-202ENST00000543982 TNNT2P45379 298 aaPredicted RBP21.68■■□□□ 1.06
XRCC1-202ENST00000543982 CADPS2Q86UW7 1296 aa21.68■■□□□ 1.06
XRCC1-202ENST00000543982 DCCP43146 1447 aa21.68■■□□□ 1.06
XRCC1-202ENST00000543982 EDC4Q6P2E9 1401 aaKnown RBP21.68■■□□□ 1.06
XRCC1-202ENST00000543982 FOXO3O43524 673 aa21.67■■□□□ 1.06
XRCC1-202ENST00000543982 DDX17Q92841 729 aaKnown RBP21.67■■□□□ 1.06
XRCC1-202ENST00000543982 MYBBP1AQ9BQG0 1328 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms