RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 PPP1R12CQ9BZL4 782 aa9.75□□□□□ -0.85
MDM2-230ENST00000543323 MTMR7Q9Y216 660 aa9.75□□□□□ -0.85
MDM2-230ENST00000543323 HOXB1P14653 301 aaPredicted RBP9.74□□□□□ -0.85
MDM2-230ENST00000543323 GUCA2AQ02747 115 aa9.74□□□□□ -0.85
MDM2-230ENST00000543323 VAC14Q08AM6 782 aa9.74□□□□□ -0.85
MDM2-230ENST00000543323 PROX2Q3B8N5 592 aa9.74□□□□□ -0.85
MDM2-230ENST00000543323 HLA-CQ95604 372 aa9.73□□□□□ -0.85
MDM2-230ENST00000543323 OTUD5Q96G74 571 aa9.73□□□□□ -0.85
MDM2-230ENST00000543323 ALG2Q9H553 416 aa9.73□□□□□ -0.85
MDM2-230ENST00000543323 SLC10A3P09131 477 aa9.72□□□□□ -0.85
MDM2-230ENST00000543323 LRRN4Q8WUT4 740 aa9.72□□□□□ -0.85
MDM2-230ENST00000543323 TSC1Q92574 1164 aa9.71□□□□□ -0.86
MDM2-230ENST00000543323 PALM3A6NDB9 673 aaPredicted RBP9.7□□□□□ -0.86
MDM2-230ENST00000543323 SOX11P35716 441 aa9.7□□□□□ -0.86
MDM2-230ENST00000543323 SWT1Q5T5J6 900 aaKnown RBP9.7□□□□□ -0.86
MDM2-230ENST00000543323 CFAP99D6REC4 459 aa9.69□□□□□ -0.86
MDM2-230ENST00000543323 KCNK17Q96T54 332 aa9.69□□□□□ -0.86
MDM2-230ENST00000543323 KIAA1468Q9P260 1216 aa9.69□□□□□ -0.86
MDM2-230ENST00000543323 LMOD1P29536 600 aaPredicted RBP9.68□□□□□ -0.86
MDM2-230ENST00000543323 GRIPAP1Q4V328 841 aa9.68□□□□□ -0.86
MDM2-230ENST00000543323 UCN2Q96RP3 112 aa9.68□□□□□ -0.86
MDM2-230ENST00000543323 C6orf229H3BNL8 230 aa9.67□□□□□ -0.86
MDM2-230ENST00000543323 EPS8L1Q8TE68 723 aa9.67□□□□□ -0.86
MDM2-230ENST00000543323 KCNH8Q96L42 1107 aa9.67□□□□□ -0.86
MDM2-230ENST00000543323 ZBED2Q9BTP6 218 aa9.67□□□□□ -0.86
MDM2-230ENST00000543323 FOXD4L5Q5VV16 416 aaPredicted RBP9.66□□□□□ -0.86
MDM2-230ENST00000543323 PRR7Q8TB68 274 aa9.66□□□□□ -0.86
MDM2-230ENST00000543323 FOXD4L4Q8WXT5 416 aaPredicted RBP9.66□□□□□ -0.86
MDM2-230ENST00000543323 TFIP11Q9UBB9 837 aaKnown RBP9.66□□□□□ -0.86
MDM2-230ENST00000543323 ATG7O95352 703 aa9.65□□□□□ -0.86
MDM2-230ENST00000543323 SLF2Q8IX21 1173 aa9.65□□□□□ -0.86
MDM2-230ENST00000543323 SLC4A3P48751 1232 aa9.64□□□□□ -0.87
MDM2-230ENST00000543323 FUT2Q10981 343 aa9.64□□□□□ -0.87
MDM2-230ENST00000543323 CARNS1A5YM72 827 aa9.63□□□□□ -0.87
MDM2-230ENST00000543323 HDGFP51858 240 aaKnown RBP9.63□□□□□ -0.87
MDM2-230ENST00000543323 SEMA3FQ13275 785 aa9.63□□□□□ -0.87
MDM2-230ENST00000543323 LHX8Q68G74 356 aa9.63□□□□□ -0.87
MDM2-230ENST00000543323 RABGEF1Q9UJ41 708 aa9.63□□□□□ -0.87
MDM2-230ENST00000543323 MAFBQ9Y5Q3 323 aaPredicted RBP9.63□□□□□ -0.87
MDM2-230ENST00000543323 NR6A1Q15406 480 aa9.62□□□□□ -0.87
MDM2-230ENST00000543323 PNMA1Q8ND90 353 aa9.62□□□□□ -0.87
MDM2-230ENST00000543323 VRTNQ9H8Y1 702 aa9.62□□□□□ -0.87
MDM2-230ENST00000543323 TMEM88BA6NKF7 163 aa9.61□□□□□ -0.87
MDM2-230ENST00000543323 ATP6V1AP38606 617 aa9.61□□□□□ -0.87
MDM2-230ENST00000543323 SEPT9Q9UHD8 586 aaPredicted RBP9.61□□□□□ -0.87
MDM2-230ENST00000543323 IVNS1ABPQ9Y6Y0 642 aa9.61□□□□□ -0.87
MDM2-230ENST00000543323 CFHP08603 1231 aa9.6□□□□□ -0.87
MDM2-230ENST00000543323 CDCA8Q53HL2 280 aa9.6□□□□□ -0.87
MDM2-230ENST00000543323 SYMPKQ92797 1274 aaKnown RBP9.6□□□□□ -0.87
MDM2-230ENST00000543323 PER1O15534 1290 aaPredicted RBP9.59□□□□□ -0.87
MDM2-230ENST00000543323 RBM25P49756 843 aaKnown RBP9.59□□□□□ -0.87
MDM2-230ENST00000543323 EIF4G2P78344 907 aaKnown RBP eCLIP9.59□□□□□ -0.87
MDM2-230ENST00000543323 TBC1D9Q6ZT07 1266 aa9.59□□□□□ -0.87
MDM2-230ENST00000543323 SLC4A5Q9BY07 1137 aa9.59□□□□□ -0.87
MDM2-230ENST00000543323 ATP9BO43861 1147 aa9.58□□□□□ -0.88
MDM2-230ENST00000543323 FAM98CQ17RN3 349 aaKnown RBP9.58□□□□□ -0.88
MDM2-230ENST00000543323 RETREG3Q86VR2 466 aa9.58□□□□□ -0.88
MDM2-230ENST00000543323 PSEN2P49810 448 aa9.57□□□□□ -0.88
MDM2-230ENST00000543323 CCDC27Q2M243 656 aa9.57□□□□□ -0.88
MDM2-230ENST00000543323 DESI1Q6ICB0 168 aa9.57□□□□□ -0.88
MDM2-230ENST00000543323 SND1Q7KZF4 910 aaKnown RBP eCLIP9.57□□□□□ -0.88
MDM2-230ENST00000543323 ZNF428Q96B54 188 aa9.57□□□□□ -0.88
MDM2-230ENST00000543323 NR1H3Q13133 447 aa9.56□□□□□ -0.88
MDM2-230ENST00000543323 KMT5BQ4FZB7 885 aa9.55□□□□□ -0.88
MDM2-230ENST00000543323 SAMD7Q7Z3H4 446 aa9.55□□□□□ -0.88
MDM2-230ENST00000543323 B4GALNT3Q6L9W6 998 aa9.54□□□□□ -0.88
MDM2-230ENST00000543323 ARHGAP33O14559 1287 aa9.53□□□□□ -0.88
MDM2-230ENST00000543323 ST18O60284 1047 aa9.53□□□□□ -0.88
MDM2-230ENST00000543323 ELOAQ14241 798 aaKnown RBP9.53□□□□□ -0.88
MDM2-230ENST00000543323 Q3C1V9 767 aa9.53□□□□□ -0.88
MDM2-230ENST00000543323 MORN1Q5T089 497 aa9.53□□□□□ -0.88
MDM2-230ENST00000543323 GNEQ9Y223 722 aaKnown RBP9.53□□□□□ -0.88
MDM2-230ENST00000543323 AMOTL2Q9Y2J4 779 aa9.53□□□□□ -0.88
MDM2-230ENST00000543323 VARS2Q5ST30 1063 aaKnown RBP9.52□□□□□ -0.89
MDM2-230ENST00000543323 KANK4Q5T7N3 995 aaPredicted RBP9.52□□□□□ -0.89
MDM2-230ENST00000543323 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
MDM2-230ENST00000543323 LAPTM4BQ86VI4 370 aa9.52□□□□□ -0.89
MDM2-230ENST00000543323 ERBB3P21860 1342 aa9.52□□□□□ -0.89
MDM2-230ENST00000543323 ZBBXA8MT70 800 aa9.51□□□□□ -0.89
MDM2-230ENST00000543323 E9PSI1 815 aa9.51□□□□□ -0.89
MDM2-230ENST00000543323 RNF40O75150 1001 aa9.51□□□□□ -0.89
MDM2-230ENST00000543323 FBXO45P0C2W1 286 aa9.51□□□□□ -0.89
MDM2-230ENST00000543323 POTEEQ6S8J3 1075 aa9.51□□□□□ -0.89
MDM2-230ENST00000543323 NFATC2IPQ8NCF5 419 aa9.51□□□□□ -0.89
MDM2-230ENST00000543323 PBX2P40425 430 aa9.5□□□□□ -0.89
MDM2-230ENST00000543323 EMP3P54852 163 aa9.5□□□□□ -0.89
MDM2-230ENST00000543323 SLC27A5Q9Y2P5 690 aa9.5□□□□□ -0.89
MDM2-230ENST00000543323 PIK3CDO00329 1044 aa9.49□□□□□ -0.89
MDM2-230ENST00000543323 ACTN4O43707 911 aaKnown RBP9.49□□□□□ -0.89
MDM2-230ENST00000543323 DMRTA1Q5VZB9 504 aa9.49□□□□□ -0.89
MDM2-230ENST00000543323 ZMIZ1Q9ULJ6 1067 aa9.49□□□□□ -0.89
MDM2-230ENST00000543323 PUS10Q3MIT2 529 aaKnown RBP9.48□□□□□ -0.89
MDM2-230ENST00000543323 FKBPLQ9UIM3 349 aa9.48□□□□□ -0.89
MDM2-230ENST00000543323 VPS9D1Q9Y2B5 631 aa9.48□□□□□ -0.89
MDM2-230ENST00000543323 ZC3H4Q9UPT8 1303 aaKnown RBP9.48□□□□□ -0.89
MDM2-230ENST00000543323 USP17L3A6NCW0 530 aa9.47□□□□□ -0.89
MDM2-230ENST00000543323 USP17L4A6NCW7 530 aa9.47□□□□□ -0.89
MDM2-230ENST00000543323 TMEM164Q5U3C3 297 aa9.47□□□□□ -0.89
MDM2-230ENST00000543323 USP17L2Q6R6M4 530 aa9.47□□□□□ -0.89
MDM2-230ENST00000543323 USP17L1Q7RTZ2 530 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms