RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 MYO5BQ9ULV0 1848 aa24.4■■□□□ 1.5
COPS7A-215ENST00000543155 EVC2Q86UK5 1308 aa24.39■■□□□ 1.5
COPS7A-215ENST00000543155 E9PSI1 815 aa24.39■■□□□ 1.49
COPS7A-215ENST00000543155 TMEM131LA2VDJ0 1609 aa24.38■■□□□ 1.49
COPS7A-215ENST00000543155 SLC52A1Q9NWF4 448 aa24.38■■□□□ 1.49
COPS7A-215ENST00000543155 IPO9Q96P70 1041 aaKnown RBP24.37■■□□□ 1.49
COPS7A-215ENST00000543155 CGNL1Q0VF96 1302 aa24.36■■□□□ 1.49
COPS7A-215ENST00000543155 IDI1Q13907 227 aa24.35■■□□□ 1.49
COPS7A-215ENST00000543155 NUTM2DQ5VT03 806 aaPredicted RBP24.35■■□□□ 1.49
COPS7A-215ENST00000543155 NSD2O96028 1365 aa24.35■■□□□ 1.49
COPS7A-215ENST00000543155 ANKRD36BQ8N2N9 1353 aa24.35■■□□□ 1.49
COPS7A-215ENST00000543155 SPINK5Q9NQ38 1064 aaPredicted RBP24.35■■□□□ 1.49
COPS7A-215ENST00000543155 PDE4AP27815 886 aa24.34■■□□□ 1.49
COPS7A-215ENST00000543155 KDM2BQ8NHM5 1336 aa24.33■■□□□ 1.49
COPS7A-215ENST00000543155 IQSEC2Q5JU85 1478 aa24.32■■□□□ 1.48
COPS7A-215ENST00000543155 BACH2Q9BYV9 841 aa24.31■■□□□ 1.48
COPS7A-215ENST00000543155 NINLQ9Y2I6 1382 aa24.3■■□□□ 1.48
COPS7A-215ENST00000543155 CENPQQ7L2Z9 268 aaPredicted RBP24.3■■□□□ 1.48
COPS7A-215ENST00000543155 TNNT2P45379 298 aaPredicted RBP24.29■■□□□ 1.48
COPS7A-215ENST00000543155 RUNDC1Q96C34 613 aa24.29■■□□□ 1.48
COPS7A-215ENST00000543155 CLTCQ00610 1675 aaKnown RBP24.28■■□□□ 1.48
COPS7A-215ENST00000543155 WWC1Q8IX03 1113 aa24.28■■□□□ 1.48
COPS7A-215ENST00000543155 CFAP53Q96M91 514 aa24.28■■□□□ 1.48
COPS7A-215ENST00000543155 PAK3O75914 559 aaPredicted RBP24.27■■□□□ 1.48
COPS7A-215ENST00000543155 DMRT2Q9Y5R5 561 aa24.27■■□□□ 1.48
COPS7A-215ENST00000543155 PTPRMP28827 1452 aa24.27■■□□□ 1.48
COPS7A-215ENST00000543155 DIP2BQ9P265 1576 aa24.27■■□□□ 1.48
COPS7A-215ENST00000543155 REREQ9P2R6 1566 aa24.26■■□□□ 1.47
COPS7A-215ENST00000543155 MTHFSP49914 203 aa24.25■■□□□ 1.47
COPS7A-215ENST00000543155 CABP2Q9NPB3 220 aa24.25■■□□□ 1.47
COPS7A-215ENST00000543155 ZBTB47Q9UFB7 747 aaPredicted RBP24.25■■□□□ 1.47
COPS7A-215ENST00000543155 ANKRD26Q9UPS8 1709 aa24.25■■□□□ 1.47
COPS7A-215ENST00000543155 ABCC11Q96J66 1382 aa24.22■■□□□ 1.47
COPS7A-215ENST00000543155 BCAR3O75815 825 aa24.22■■□□□ 1.47
COPS7A-215ENST00000543155 YTHDC2Q9H6S0 1430 aaKnown RBP24.22■■□□□ 1.47
COPS7A-215ENST00000543155 A0A1W2PP64 1363 aa24.21■■□□□ 1.47
COPS7A-215ENST00000543155 AGLP35573 1532 aa24.2■■□□□ 1.47
COPS7A-215ENST00000543155 TCP11L2Q8N4U5 519 aa24.2■■□□□ 1.47
COPS7A-215ENST00000543155 PHF23Q9BUL5 403 aaPredicted RBP24.2■■□□□ 1.47
COPS7A-215ENST00000543155 STK26Q9P289 416 aa24.2■■□□□ 1.47
COPS7A-215ENST00000543155 ALKQ9UM73 1620 aa24.2■■□□□ 1.46
COPS7A-215ENST00000543155 ATAD2Q6PL18 1390 aa24.2■■□□□ 1.46
COPS7A-215ENST00000543155 ADGRB2O60241 1585 aa24.2■■□□□ 1.46
COPS7A-215ENST00000543155 SAFB2Q14151 953 aaKnown RBP eCLIP24.2■■□□□ 1.46
COPS7A-215ENST00000543155 CYB5RLQ6IPT4 315 aa24.2■■□□□ 1.46
COPS7A-215ENST00000543155 RIMBP3CA6NJZ7 1639 aa24.2■■□□□ 1.46
COPS7A-215ENST00000543155 RIMBP3BA6NNM3 1639 aa24.2■■□□□ 1.46
COPS7A-215ENST00000543155 RIMBP3Q9UFD9 1639 aa24.2■■□□□ 1.46
COPS7A-215ENST00000543155 NPM2Q86SE8 214 aaKnown RBP24.19■■□□□ 1.46
COPS7A-215ENST00000543155 NCBP3Q53F19 620 aaKnown RBP24.19■■□□□ 1.46
COPS7A-215ENST00000543155 SRPK2P78362 688 aaKnown RBP24.18■■□□□ 1.46
COPS7A-215ENST00000543155 CCDC27Q2M243 656 aa24.18■■□□□ 1.46
COPS7A-215ENST00000543155 SKAP1Q86WV1 359 aa24.18■■□□□ 1.46
COPS7A-215ENST00000543155 WDR63Q8IWG1 891 aa24.18■■□□□ 1.46
COPS7A-215ENST00000543155 TSPOAP1O95153 1857 aa24.17■■□□□ 1.46
COPS7A-215ENST00000543155 PDE3AQ14432 1141 aa24.17■■□□□ 1.46
COPS7A-215ENST00000543155 MED14O60244 1454 aa24.16■■□□□ 1.46
COPS7A-215ENST00000543155 RRP7AQ9Y3A4 280 aaKnown RBP24.16■■□□□ 1.46
COPS7A-215ENST00000543155 FAM69CQ0P6D2 419 aa24.16■■□□□ 1.46
COPS7A-215ENST00000543155 NEUROD2Q15784 382 aa24.15■■□□□ 1.46
COPS7A-215ENST00000543155 FBXO31Q5XUX0 539 aaPredicted RBP24.15■■□□□ 1.46
COPS7A-215ENST00000543155 PRAM1Q96QH2 718 aa24.14■■□□□ 1.46
COPS7A-215ENST00000543155 PPP6R1Q9UPN7 881 aa24.14■■□□□ 1.46
COPS7A-215ENST00000543155 CD163L1Q9NR16 1453 aa24.13■■□□□ 1.45
COPS7A-215ENST00000543155 TERF2IPQ9NYB0 399 aa24.13■■□□□ 1.45
COPS7A-215ENST00000543155 POGKQ9P215 609 aa24.13■■□□□ 1.45
COPS7A-215ENST00000543155 KIF20BQ96Q89 1820 aa24.13■■□□□ 1.45
COPS7A-215ENST00000543155 MINK1Q8N4C8 1332 aaPredicted RBP24.13■■□□□ 1.45
COPS7A-215ENST00000543155 SPATA31D1Q6ZQQ2 1576 aa24.13■■□□□ 1.45
COPS7A-215ENST00000543155 COL3A1P02461 1466 aaPredicted RBP24.12■■□□□ 1.45
COPS7A-215ENST00000543155 CANXP27824 592 aaKnown RBP24.12■■□□□ 1.45
COPS7A-215ENST00000543155 DLC1Q96QB1 1528 aa24.11■■□□□ 1.45
COPS7A-215ENST00000543155 U2AF1L5P0DN76 240 aaPredicted RBP24.1■■□□□ 1.45
COPS7A-215ENST00000543155 U2AF1Q01081 240 aaKnown RBP eCLIP24.1■■□□□ 1.45
COPS7A-215ENST00000543155 SENP3Q9H4L4 574 aaPredicted RBP24.1■■□□□ 1.45
COPS7A-215ENST00000543155 NLRP1Q9C000 1473 aa24.1■■□□□ 1.45
COPS7A-215ENST00000543155 ARHGEF40Q8TER5 1519 aa24.1■■□□□ 1.45
COPS7A-215ENST00000543155 STAG3Q9UJ98 1225 aa24.1■■□□□ 1.45
COPS7A-215ENST00000543155 SETD1AO15047 1707 aaKnown RBP24.09■■□□□ 1.45
COPS7A-215ENST00000543155 RARSP54136 660 aaKnown RBP24.08■■□□□ 1.45
COPS7A-215ENST00000543155 A2ML1A8K2U0 1454 aa24.08■■□□□ 1.45
COPS7A-215ENST00000543155 GGNBP2Q9H3C7 697 aa24.07■■□□□ 1.44
COPS7A-215ENST00000543155 MYH16Q9H6N6 1097 aa24.07■■□□□ 1.44
COPS7A-215ENST00000543155 FAM161AQ3B820 660 aa24.07■■□□□ 1.44
COPS7A-215ENST00000543155 HDGFL2Q7Z4V5 671 aaPredicted RBP24.05■■□□□ 1.44
COPS7A-215ENST00000543155 CLUAP1Q96AJ1 413 aa24.05■■□□□ 1.44
COPS7A-215ENST00000543155 DDRGK1Q96HY6 314 aa24.05■■□□□ 1.44
COPS7A-215ENST00000543155 FYB1O15117 783 aa24.04■■□□□ 1.44
COPS7A-215ENST00000543155 PANK1Q8TE04 598 aa24.04■■□□□ 1.44
COPS7A-215ENST00000543155 VIRMAQ69YN4 1812 aaKnown RBP24.04■■□□□ 1.44
COPS7A-215ENST00000543155 AAMPQ13685 434 aa24.04■■□□□ 1.44
COPS7A-215ENST00000543155 NBR1Q14596 966 aa24.04■■□□□ 1.44
COPS7A-215ENST00000543155 CDK19Q9BWU1 502 aa24.04■■□□□ 1.44
COPS7A-215ENST00000543155 RIMS2Q9UQ26 1411 aa24.03■■□□□ 1.44
COPS7A-215ENST00000543155 COG6Q9Y2V7 657 aa24.03■■□□□ 1.44
COPS7A-215ENST00000543155 FRAT1Q92837 279 aaPredicted RBP24.02■■□□□ 1.44
COPS7A-215ENST00000543155 C8orf34Q49A92 452 aa24.02■■□□□ 1.44
COPS7A-215ENST00000543155 ATP7BP35670 1465 aa24.01■■□□□ 1.43
COPS7A-215ENST00000543155 PLEKHF1Q96S99 279 aa24.01■■□□□ 1.43
COPS7A-215ENST00000543155 U2SURPO15042 1029 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms