RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 CYP4X1Q8N118 509 aa9.09□□□□□ -0.95
LEMD3-204ENST00000542032 SLC16A10Q8TF71 515 aa9.09□□□□□ -0.95
LEMD3-204ENST00000542032 TRIM47Q96LD4 638 aa9.09□□□□□ -0.95
LEMD3-204ENST00000542032 PRR14Q9BWN1 585 aa9.09□□□□□ -0.95
LEMD3-204ENST00000542032 ACTN4O43707 911 aaKnown RBP9.08□□□□□ -0.96
LEMD3-204ENST00000542032 BCANQ96GW7 911 aa9.08□□□□□ -0.96
LEMD3-204ENST00000542032 CFHP08603 1231 aa9.06□□□□□ -0.96
LEMD3-204ENST00000542032 KMT5BQ4FZB7 885 aa9.06□□□□□ -0.96
LEMD3-204ENST00000542032 XP32Q5T750 250 aa9.06□□□□□ -0.96
LEMD3-204ENST00000542032 SULF1Q8IWU6 871 aa9.05□□□□□ -0.96
LEMD3-204ENST00000542032 SENP2Q9HC62 589 aa9.05□□□□□ -0.96
LEMD3-204ENST00000542032 DDX11L8A8MPP1 907 aa9.03□□□□□ -0.96
LEMD3-204ENST00000542032 RSPH4AQ5TD94 716 aa9.03□□□□□ -0.96
LEMD3-204ENST00000542032 CD46P15529 392 aa9.02□□□□□ -0.97
LEMD3-204ENST00000542032 GCGRP47871 477 aa9.02□□□□□ -0.97
LEMD3-204ENST00000542032 MDM2Q00987 491 aaPredicted RBP9.02□□□□□ -0.97
LEMD3-204ENST00000542032 KRI1Q8N9T8 703 aaKnown RBP9.02□□□□□ -0.97
LEMD3-204ENST00000542032 AMHR2Q16671 573 aa9.01□□□□□ -0.97
LEMD3-204ENST00000542032 IRF7Q92985 503 aa9.01□□□□□ -0.97
LEMD3-204ENST00000542032 KRTAP4-8Q9BYQ9 185 aa9.01□□□□□ -0.97
LEMD3-204ENST00000542032 GPCPD1Q9NPB8 672 aa9.01□□□□□ -0.97
LEMD3-204ENST00000542032 RDH13Q8NBN7 331 aa9□□□□□ -0.97
LEMD3-204ENST00000542032 REPIN1Q9BWE0 567 aaKnown RBP9□□□□□ -0.97
LEMD3-204ENST00000542032 NXF1Q9UBU9 619 aaKnown RBP9□□□□□ -0.97
LEMD3-204ENST00000542032 ADH1BP00325 375 aa8.99□□□□□ -0.97
LEMD3-204ENST00000542032 CLCN1P35523 988 aa8.99□□□□□ -0.97
LEMD3-204ENST00000542032 GSK3AP49840 483 aa8.99□□□□□ -0.97
LEMD3-204ENST00000542032 KCNMA1Q12791 1236 aa8.99□□□□□ -0.97
LEMD3-204ENST00000542032 FAM217BQ9NTX9 383 aaPredicted RBP8.99□□□□□ -0.97
LEMD3-204ENST00000542032 TTC24A2A3L6 582 aaPredicted RBP8.98□□□□□ -0.97
LEMD3-204ENST00000542032 VEGFBP49765 207 aa8.98□□□□□ -0.97
LEMD3-204ENST00000542032 KIFC2Q96AC6 838 aa8.98□□□□□ -0.97
LEMD3-204ENST00000542032 SLC6A16Q9GZN6 736 aa8.98□□□□□ -0.97
LEMD3-204ENST00000542032 TRIM66O15016 1216 aa8.97□□□□□ -0.97
LEMD3-204ENST00000542032 FUT2Q10981 343 aa8.97□□□□□ -0.97
LEMD3-204ENST00000542032 MORN1Q5T089 497 aa8.96□□□□□ -0.98
LEMD3-204ENST00000542032 AK7Q96M32 723 aa8.96□□□□□ -0.98
LEMD3-204ENST00000542032 ATP6V1AP38606 617 aa8.95□□□□□ -0.98
LEMD3-204ENST00000542032 PUS10Q3MIT2 529 aaKnown RBP8.95□□□□□ -0.98
LEMD3-204ENST00000542032 NR1I2O75469 434 aa8.94□□□□□ -0.98
LEMD3-204ENST00000542032 SCUBE3Q8IX30 993 aa8.94□□□□□ -0.98
LEMD3-204ENST00000542032 ERBB4Q15303 1308 aa8.94□□□□□ -0.98
LEMD3-204ENST00000542032 TMEM151AQ8N4L1 468 aa8.93□□□□□ -0.98
LEMD3-204ENST00000542032 SLC24A3Q9HC58 644 aa8.93□□□□□ -0.98
LEMD3-204ENST00000542032 RPIAP49247 311 aa8.92□□□□□ -0.98
LEMD3-204ENST00000542032 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
LEMD3-204ENST00000542032 THAP11Q96EK4 314 aa8.92□□□□□ -0.98
LEMD3-204ENST00000542032 SALL2Q9Y467 1007 aaPredicted RBP8.92□□□□□ -0.98
LEMD3-204ENST00000542032 KDM4AO75164 1064 aa8.91□□□□□ -0.98
LEMD3-204ENST00000542032 SMPD1P17405 629 aa8.91□□□□□ -0.98
LEMD3-204ENST00000542032 SSTR3P32745 418 aaPredicted RBP8.91□□□□□ -0.98
LEMD3-204ENST00000542032 GIGYF2Q6Y7W6 1299 aaKnown RBP8.91□□□□□ -0.98
LEMD3-204ENST00000542032 SLC27A5Q9Y2P5 690 aa8.91□□□□□ -0.98
LEMD3-204ENST00000542032 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.9□□□□□ -0.98
LEMD3-204ENST00000542032 GDF11O95390 407 aa8.9□□□□□ -0.98
LEMD3-204ENST00000542032 CD2BP2O95400 341 aaKnown RBP8.9□□□□□ -0.98
LEMD3-204ENST00000542032 USP46P62068 366 aa8.9□□□□□ -0.98
LEMD3-204ENST00000542032 PDE4DQ08499 809 aa8.89□□□□□ -0.99
LEMD3-204ENST00000542032 TTLL12Q14166 644 aaPredicted RBP8.89□□□□□ -0.99
LEMD3-204ENST00000542032 H3BM21 787 aa8.88□□□□□ -0.99
LEMD3-204ENST00000542032 HOXA2O43364 376 aa8.88□□□□□ -0.99
LEMD3-204ENST00000542032 GRIPAP1Q4V328 841 aa8.88□□□□□ -0.99
LEMD3-204ENST00000542032 BRICD5Q6PL45 260 aa8.88□□□□□ -0.99
LEMD3-204ENST00000542032 NPAS3Q8IXF0 933 aa8.88□□□□□ -0.99
LEMD3-204ENST00000542032 RASSF7Q02833 373 aa8.87□□□□□ -0.99
LEMD3-204ENST00000542032 MS4A1P11836 297 aa8.86□□□□□ -0.99
LEMD3-204ENST00000542032 SPSB2Q99619 263 aa8.86□□□□□ -0.99
LEMD3-204ENST00000542032 KRTAP9-2Q9BYQ4 174 aa8.86□□□□□ -0.99
LEMD3-204ENST00000542032 KRTAP9-6A0A140TA67 174 aa8.84□□□□□ -0.99
LEMD3-204ENST00000542032 J3QL48 77 aa8.84□□□□□ -0.99
LEMD3-204ENST00000542032 FMNL1O95466 1100 aaPredicted RBP8.84□□□□□ -0.99
LEMD3-204ENST00000542032 RNF19BQ6ZMZ0 732 aa8.84□□□□□ -0.99
LEMD3-204ENST00000542032 FAM160A2Q8N612 972 aaPredicted RBP8.84□□□□□ -0.99
LEMD3-204ENST00000542032 SNIP1Q8TAD8 396 aaKnown RBP8.84□□□□□ -0.99
LEMD3-204ENST00000542032 SPIRE2Q8WWL2 714 aa8.84□□□□□ -0.99
LEMD3-204ENST00000542032 HPS1Q92902 700 aa8.84□□□□□ -0.99
LEMD3-204ENST00000542032 HLA-CQ95604 372 aa8.84□□□□□ -0.99
LEMD3-204ENST00000542032 MSS51Q4VC12 460 aa8.83□□□□□ -1
LEMD3-204ENST00000542032 BEGAINQ9BUH8 593 aa8.83□□□□□ -1
LEMD3-204ENST00000542032 FCF1Q9Y324 198 aaKnown RBP8.83□□□□□ -1
LEMD3-204ENST00000542032 Q3C1V9 767 aa8.82□□□□□ -1
LEMD3-204ENST00000542032 NUTM1Q86Y26 1132 aa8.82□□□□□ -1
LEMD3-204ENST00000542032 GPAT2Q6NUI2 795 aa8.81□□□□□ -1
LEMD3-204ENST00000542032 PSMG3-AS1Q96PY0 264 aa8.81□□□□□ -1
LEMD3-204ENST00000542032 GUCA2AQ02747 115 aa8.8□□□□□ -1
LEMD3-204ENST00000542032 GJA5P36382 358 aa8.79□□□□□ -1
LEMD3-204ENST00000542032 KRTAP1-3Q8IUG1 177 aa8.79□□□□□ -1
LEMD3-204ENST00000542032 PCDHGC3Q9UN70 934 aa8.79□□□□□ -1
LEMD3-204ENST00000542032 MOXD2PA6NHM9 499 aa8.78□□□□□ -1
LEMD3-204ENST00000542032 TBC1D2Q9BYX2 928 aa8.78□□□□□ -1
LEMD3-204ENST00000542032 PRDM9Q9NQV7 894 aa8.78□□□□□ -1
LEMD3-204ENST00000542032 WNT7AO00755 349 aa8.77□□□□□ -1.01
LEMD3-204ENST00000542032 FDX1P10109 184 aa8.77□□□□□ -1.01
LEMD3-204ENST00000542032 MMP16P51512 607 aa8.77□□□□□ -1.01
LEMD3-204ENST00000542032 DIXDC1Q155Q3 683 aa8.77□□□□□ -1.01
LEMD3-204ENST00000542032 USB1Q9BQ65 265 aaKnown RBP8.77□□□□□ -1.01
LEMD3-204ENST00000542032 NDUFV2P19404 249 aa8.76□□□□□ -1.01
LEMD3-204ENST00000542032 DXOO77932 396 aaKnown RBP8.75□□□□□ -1.01
LEMD3-204ENST00000542032 MRGPRX2Q96LB1 330 aa8.75□□□□□ -1.01
LEMD3-204ENST00000542032 SPTLC1O15269 473 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms