RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 PDE3AQ14432 1141 aa20.06■□□□□ 0.8
VARS2-212ENST00000542001 SLC26A8Q96RN1 970 aa20.06■□□□□ 0.8
VARS2-212ENST00000542001 IDI1Q13907 227 aa20.05■□□□□ 0.8
VARS2-212ENST00000542001 CTTNBP2Q8WZ74 1663 aa20.04■□□□□ 0.8
VARS2-212ENST00000542001 STAC3Q96MF2 364 aa20.04■□□□□ 0.8
VARS2-212ENST00000542001 MIS18AQ9NYP9 233 aa20.04■□□□□ 0.8
VARS2-212ENST00000542001 RARSP54136 660 aaKnown RBP20.03■□□□□ 0.8
VARS2-212ENST00000542001 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
VARS2-212ENST00000542001 EID1Q9Y6B2 187 aa20.03■□□□□ 0.8
VARS2-212ENST00000542001 SSH1Q8WYL5 1049 aa20.03■□□□□ 0.8
VARS2-212ENST00000542001 GLIPR1L2Q4G1C9 344 aa20.02■□□□□ 0.8
VARS2-212ENST00000542001 SULT6B1Q6IMI4 303 aa20.02■□□□□ 0.8
VARS2-212ENST00000542001 CSB-PGBD3P0DP91 1061 aa20.02■□□□□ 0.79
VARS2-212ENST00000542001 TMPOP42166 694 aaKnown RBP20.02■□□□□ 0.79
VARS2-212ENST00000542001 LMOD3Q0VAK6 560 aa20.02■□□□□ 0.79
VARS2-212ENST00000542001 FKBP5Q13451 457 aaPredicted RBP20.02■□□□□ 0.79
VARS2-212ENST00000542001 TMEM57Q8N5G2 664 aa20.02■□□□□ 0.79
VARS2-212ENST00000542001 CARD14Q9BXL6 1004 aa20.01■□□□□ 0.79
VARS2-212ENST00000542001 TCOF1Q13428 1488 aaKnown RBP20.01■□□□□ 0.79
VARS2-212ENST00000542001 KIF14Q15058 1648 aa20.01■□□□□ 0.79
VARS2-212ENST00000542001 RAPGEF6Q8TEU7 1601 aa20.01■□□□□ 0.79
VARS2-212ENST00000542001 PLEKHH1Q9ULM0 1364 aa20.01■□□□□ 0.79
VARS2-212ENST00000542001 WDR62O43379 1518 aa20.01■□□□□ 0.79
VARS2-212ENST00000542001 DDX49Q9Y6V7 483 aaKnown RBP20■□□□□ 0.79
VARS2-212ENST00000542001 DISP1Q96F81 1524 aa19.99■□□□□ 0.79
VARS2-212ENST00000542001 ATF7IPQ6VMQ6 1270 aa19.99■□□□□ 0.79
VARS2-212ENST00000542001 TWISTNBQ3B726 338 aaPredicted RBP19.99■□□□□ 0.79
VARS2-212ENST00000542001 RBM33Q96EV2 1170 aaKnown RBP19.99■□□□□ 0.79
VARS2-212ENST00000542001 MVPQ14764 893 aaKnown RBP19.98■□□□□ 0.79
VARS2-212ENST00000542001 HMMRO75330 724 aa19.98■□□□□ 0.79
VARS2-212ENST00000542001 KIAA1211Q6ZU35 1233 aa19.98■□□□□ 0.79
VARS2-212ENST00000542001 TSPYL4Q9UJ04 414 aa19.98■□□□□ 0.79
VARS2-212ENST00000542001 EMILIN1Q9Y6C2 1016 aa19.98■□□□□ 0.79
VARS2-212ENST00000542001 CHMP3Q9Y3E7 222 aa19.98■□□□□ 0.79
VARS2-212ENST00000542001 KIF16BQ96L93 1317 aa19.98■□□□□ 0.79
VARS2-212ENST00000542001 MCCP23508 829 aa19.97■□□□□ 0.79
VARS2-212ENST00000542001 PRAG1Q86YV5 1406 aa19.97■□□□□ 0.79
VARS2-212ENST00000542001 TRAPPC8Q9Y2L5 1435 aa19.97■□□□□ 0.79
VARS2-212ENST00000542001 GNAI1P63096 354 aa19.97■□□□□ 0.79
VARS2-212ENST00000542001 TEX14Q8IWB6 1497 aa19.97■□□□□ 0.79
VARS2-212ENST00000542001 NOS1P29475 1434 aa19.96■□□□□ 0.79
VARS2-212ENST00000542001 SYCP2Q9BX26 1530 aa19.96■□□□□ 0.79
VARS2-212ENST00000542001 NLRP6P59044 892 aa19.96■□□□□ 0.79
VARS2-212ENST00000542001 PCDHB15Q9Y5E8 787 aa19.96■□□□□ 0.79
VARS2-212ENST00000542001 NME9Q86XW9 330 aa19.96■□□□□ 0.79
VARS2-212ENST00000542001 PARD3Q8TEW0 1356 aa19.95■□□□□ 0.78
VARS2-212ENST00000542001 RALGAPBQ86X10 1494 aa19.94■□□□□ 0.78
VARS2-212ENST00000542001 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
VARS2-212ENST00000542001 RLBP1P12271 317 aa19.94■□□□□ 0.78
VARS2-212ENST00000542001 ANO2Q9NQ90 1003 aa19.94■□□□□ 0.78
VARS2-212ENST00000542001 CHMP5Q9NZZ3 219 aa19.94■□□□□ 0.78
VARS2-212ENST00000542001 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.93■□□□□ 0.78
VARS2-212ENST00000542001 API5Q9BZZ5 524 aaKnown RBP19.93■□□□□ 0.78
VARS2-212ENST00000542001 WDR63Q8IWG1 891 aa19.93■□□□□ 0.78
VARS2-212ENST00000542001 FAM83GA6ND36 823 aa19.92■□□□□ 0.78
VARS2-212ENST00000542001 MCM10Q7L590 875 aa19.92■□□□□ 0.78
VARS2-212ENST00000542001 MSNP26038 577 aaKnown RBP19.92■□□□□ 0.78
VARS2-212ENST00000542001 KIAA0556O60303 1618 aa19.91■□□□□ 0.78
VARS2-212ENST00000542001 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.91■□□□□ 0.78
VARS2-212ENST00000542001 SEC24BO95487 1268 aa19.91■□□□□ 0.78
VARS2-212ENST00000542001 TRIM27P14373 513 aa19.91■□□□□ 0.78
VARS2-212ENST00000542001 GOLGA6L4A6NEF3 574 aa19.9■□□□□ 0.78
VARS2-212ENST00000542001 SLC4A2P04920 1241 aa19.9■□□□□ 0.78
VARS2-212ENST00000542001 ADAMTS12P58397 1594 aa19.9■□□□□ 0.78
VARS2-212ENST00000542001 ADGRL1O94910 1474 aa19.89■□□□□ 0.78
VARS2-212ENST00000542001 FAM135AQ9P2D6 1515 aa19.89■□□□□ 0.78
VARS2-212ENST00000542001 ZRANB1Q9UGI0 708 aa19.89■□□□□ 0.78
VARS2-212ENST00000542001 TEFQ10587 303 aa19.89■□□□□ 0.77
VARS2-212ENST00000542001 ST18O60284 1047 aa19.89■□□□□ 0.77
VARS2-212ENST00000542001 SPATA31E1Q6ZUB1 1445 aa19.88■□□□□ 0.77
VARS2-212ENST00000542001 AIMP1Q12904 312 aaKnown RBP19.87■□□□□ 0.77
VARS2-212ENST00000542001 SLC52A1Q9NWF4 448 aa19.87■□□□□ 0.77
VARS2-212ENST00000542001 MCTP1Q6DN14 999 aa19.87■□□□□ 0.77
VARS2-212ENST00000542001 NKTRP30414 1462 aaKnown RBP19.86■□□□□ 0.77
VARS2-212ENST00000542001 SCAF11Q99590 1463 aaKnown RBP19.86■□□□□ 0.77
VARS2-212ENST00000542001 LRPPRCP42704 1394 aaKnown RBP19.86■□□□□ 0.77
VARS2-212ENST00000542001 GPRASP1Q5JY77 1395 aa19.86■□□□□ 0.77
VARS2-212ENST00000542001 SMARCA5O60264 1052 aaPredicted RBP19.86■□□□□ 0.77
VARS2-212ENST00000542001 TRAK2O60296 914 aa19.86■□□□□ 0.77
VARS2-212ENST00000542001 NCKAP5LQ9HCH0 1330 aa19.86■□□□□ 0.77
VARS2-212ENST00000542001 XPCQ01831 940 aaPredicted RBP19.85■□□□□ 0.77
VARS2-212ENST00000542001 CEBPAP49715 358 aaPredicted RBP19.85■□□□□ 0.77
VARS2-212ENST00000542001 C14orf93Q9H972 538 aaKnown RBP19.84■□□□□ 0.77
VARS2-212ENST00000542001 CD109Q6YHK3 1445 aa19.84■□□□□ 0.77
VARS2-212ENST00000542001 MPNDQ8N594 471 aa19.84■□□□□ 0.77
VARS2-212ENST00000542001 MAP4K4O95819 1239 aaPredicted RBP19.84■□□□□ 0.77
VARS2-212ENST00000542001 FANCAO15360 1455 aa19.84■□□□□ 0.77
VARS2-212ENST00000542001 CHD1LQ86WJ1 897 aa19.83■□□□□ 0.77
VARS2-212ENST00000542001 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.77
VARS2-212ENST00000542001 DDX11L8A8MPP1 907 aa19.83■□□□□ 0.76
VARS2-212ENST00000542001 F6X3S4 739 aa19.83■□□□□ 0.76
VARS2-212ENST00000542001 ABTB2Q8N961 1025 aa19.83■□□□□ 0.76
VARS2-212ENST00000542001 PSME1Q06323 249 aa19.82■□□□□ 0.76
VARS2-212ENST00000542001 C9orf78Q9NZ63 289 aaPredicted RBP19.82■□□□□ 0.76
VARS2-212ENST00000542001 C8orf34Q49A92 452 aa19.82■□□□□ 0.76
VARS2-212ENST00000542001 SAMD9Q5K651 1589 aa19.81■□□□□ 0.76
VARS2-212ENST00000542001 A2MP01023 1474 aa19.81■□□□□ 0.76
VARS2-212ENST00000542001 RNF214Q8ND24 703 aa19.81■□□□□ 0.76
VARS2-212ENST00000542001 TBC1D2Q9BYX2 928 aa19.81■□□□□ 0.76
VARS2-212ENST00000542001 EXOC6BQ9Y2D4 811 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms