RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 KIAA1211Q6ZU35 1233 aa10.88□□□□□ -0.67
FNDC3A-206ENST00000541916 AK7Q96M32 723 aa10.88□□□□□ -0.67
FNDC3A-206ENST00000541916 PLCH2O75038 1416 aa10.87□□□□□ -0.67
FNDC3A-206ENST00000541916 DAPK1P53355 1430 aa10.87□□□□□ -0.67
FNDC3A-206ENST00000541916 TMOD3Q9NYL9 352 aa10.87□□□□□ -0.67
FNDC3A-206ENST00000541916 SUPT6HQ7KZ85 1726 aaKnown RBP10.87□□□□□ -0.67
FNDC3A-206ENST00000541916 CCDC61Q9Y6R9 512 aa10.87□□□□□ -0.67
FNDC3A-206ENST00000541916 NCLP19338 710 aaKnown RBP10.86□□□□□ -0.67
FNDC3A-206ENST00000541916 TCERG1O14776 1098 aaKnown RBP10.86□□□□□ -0.67
FNDC3A-206ENST00000541916 GNL2Q13823 731 aaKnown RBP10.86□□□□□ -0.67
FNDC3A-206ENST00000541916 C19orf44Q9H6X5 657 aa10.86□□□□□ -0.67
FNDC3A-206ENST00000541916 CAMSAP2Q08AD1 1489 aa10.86□□□□□ -0.67
FNDC3A-206ENST00000541916 ZMYM3Q14202 1370 aa10.86□□□□□ -0.67
FNDC3A-206ENST00000541916 SAMD1Q6SPF0 538 aaPredicted RBP10.86□□□□□ -0.67
FNDC3A-206ENST00000541916 ADAMTS12P58397 1594 aa10.85□□□□□ -0.67
FNDC3A-206ENST00000541916 MCCP23508 829 aa10.85□□□□□ -0.67
FNDC3A-206ENST00000541916 RIPK4P57078 832 aa10.84□□□□□ -0.67
FNDC3A-206ENST00000541916 ANP32BQ92688 251 aaKnown RBP10.84□□□□□ -0.67
FNDC3A-206ENST00000541916 NBR1Q14596 966 aa10.84□□□□□ -0.67
FNDC3A-206ENST00000541916 SUPT16HQ9Y5B9 1047 aaKnown RBP10.84□□□□□ -0.67
FNDC3A-206ENST00000541916 A2MP01023 1474 aa10.84□□□□□ -0.67
FNDC3A-206ENST00000541916 ATP10BO94823 1461 aa10.84□□□□□ -0.67
FNDC3A-206ENST00000541916 TPRNQ4KMQ1 711 aa10.84□□□□□ -0.67
FNDC3A-206ENST00000541916 PLIN1O60240 522 aa10.83□□□□□ -0.68
FNDC3A-206ENST00000541916 MPRIPQ6WCQ1 1025 aa10.83□□□□□ -0.68
FNDC3A-206ENST00000541916 WDHD1O75717 1129 aaPredicted RBP10.83□□□□□ -0.68
FNDC3A-206ENST00000541916 PHF14O94880 888 aa10.83□□□□□ -0.68
FNDC3A-206ENST00000541916 CHRNA2Q15822 529 aa10.82□□□□□ -0.68
FNDC3A-206ENST00000541916 STARD3NLO95772 234 aa10.82□□□□□ -0.68
FNDC3A-206ENST00000541916 FKBP5Q13451 457 aaPredicted RBP10.82□□□□□ -0.68
FNDC3A-206ENST00000541916 CFAP44Q96MT7 982 aa10.82□□□□□ -0.68
FNDC3A-206ENST00000541916 ATAD2Q6PL18 1390 aa10.82□□□□□ -0.68
FNDC3A-206ENST00000541916 BAG6P46379 1132 aa10.81□□□□□ -0.68
FNDC3A-206ENST00000541916 RBM5P52756 815 aaKnown RBP eCLIP10.81□□□□□ -0.68
FNDC3A-206ENST00000541916 ZNF219Q9P2Y4 722 aaPredicted RBP10.81□□□□□ -0.68
FNDC3A-206ENST00000541916 TCEAL9Q9UHQ7 104 aa10.81□□□□□ -0.68
FNDC3A-206ENST00000541916 ATP10AO60312 1499 aa10.81□□□□□ -0.68
FNDC3A-206ENST00000541916 ZNF652Q9Y2D9 606 aa10.81□□□□□ -0.68
FNDC3A-206ENST00000541916 RAPGEF6Q8TEU7 1601 aa10.81□□□□□ -0.68
FNDC3A-206ENST00000541916 ABCC10Q5T3U5 1492 aa10.81□□□□□ -0.68
FNDC3A-206ENST00000541916 DISP3Q9P2K9 1392 aa10.8□□□□□ -0.68
FNDC3A-206ENST00000541916 TRIM6-TRIM34B2RNG4 842 aa10.8□□□□□ -0.68
FNDC3A-206ENST00000541916 CEP170Q5SW79 1584 aa10.8□□□□□ -0.68
FNDC3A-206ENST00000541916 RGS3P49796 1198 aa10.8□□□□□ -0.68
FNDC3A-206ENST00000541916 STK32BQ9NY57 414 aa10.8□□□□□ -0.68
FNDC3A-206ENST00000541916 KDM5BQ9UGL1 1544 aa10.8□□□□□ -0.68
FNDC3A-206ENST00000541916 MARCH6O60337 910 aa10.8□□□□□ -0.68
FNDC3A-206ENST00000541916 USP21Q9UK80 565 aa10.79□□□□□ -0.68
FNDC3A-206ENST00000541916 KIAA1107Q9UPP5 1409 aa10.79□□□□□ -0.68
FNDC3A-206ENST00000541916 DDB1Q16531 1140 aa10.79□□□□□ -0.68
FNDC3A-206ENST00000541916 CCDC27Q2M243 656 aa10.79□□□□□ -0.68
FNDC3A-206ENST00000541916 LRRFIP1Q32MZ4 808 aaKnown RBP10.79□□□□□ -0.68
FNDC3A-206ENST00000541916 WASLO00401 505 aaPredicted RBP10.79□□□□□ -0.68
FNDC3A-206ENST00000541916 SULT6B1Q6IMI4 303 aa10.79□□□□□ -0.68
FNDC3A-206ENST00000541916 SLC12A5Q9H2X9 1139 aa10.79□□□□□ -0.68
FNDC3A-206ENST00000541916 TTLL12Q14166 644 aaPredicted RBP10.79□□□□□ -0.68
FNDC3A-206ENST00000541916 RRS1Q15050 365 aaKnown RBP10.79□□□□□ -0.68
FNDC3A-206ENST00000541916 ZNF772Q68DY9 489 aaPredicted RBP10.78□□□□□ -0.68
FNDC3A-206ENST00000541916 NUP160Q12769 1436 aa10.78□□□□□ -0.68
FNDC3A-206ENST00000541916 RIMS2Q9UQ26 1411 aa10.78□□□□□ -0.68
FNDC3A-206ENST00000541916 PTCD1O75127 700 aaKnown RBP10.78□□□□□ -0.68
FNDC3A-206ENST00000541916 ACSBG1Q96GR2 724 aa10.78□□□□□ -0.68
FNDC3A-206ENST00000541916 RFC4P35249 363 aa10.78□□□□□ -0.68
FNDC3A-206ENST00000541916 PNISRQ8TF01 805 aaKnown RBP10.77□□□□□ -0.68
FNDC3A-206ENST00000541916 TFCP2L1Q9NZI6 479 aa10.77□□□□□ -0.68
FNDC3A-206ENST00000541916 DHX16O60231 1041 aaKnown RBP10.77□□□□□ -0.69
FNDC3A-206ENST00000541916 GNAI1P63096 354 aa10.77□□□□□ -0.69
FNDC3A-206ENST00000541916 CLUAP1Q96AJ1 413 aa10.77□□□□□ -0.69
FNDC3A-206ENST00000541916 MYBBP1AQ9BQG0 1328 aaKnown RBP10.77□□□□□ -0.69
FNDC3A-206ENST00000541916 NBPF1Q3BBV0 1214 aa10.77□□□□□ -0.69
FNDC3A-206ENST00000541916 CLEC11AQ9Y240 323 aa10.77□□□□□ -0.69
FNDC3A-206ENST00000541916 RXRBP28702 533 aa10.76□□□□□ -0.69
FNDC3A-206ENST00000541916 G3BP1Q13283 466 aaKnown RBP eCLIP10.76□□□□□ -0.69
FNDC3A-206ENST00000541916 FYB1O15117 783 aa10.76□□□□□ -0.69
FNDC3A-206ENST00000541916 GRM1Q13255 1194 aa10.76□□□□□ -0.69
FNDC3A-206ENST00000541916 ZNF622Q969S3 477 aaKnown RBP eCLIP10.76□□□□□ -0.694e-6■■■□□ 16.7
FNDC3A-206ENST00000541916 BIVM-ERCC5R4GMW8 1640 aa10.76□□□□□ -0.69
FNDC3A-206ENST00000541916 APPP05067 770 aa10.76□□□□□ -0.69
FNDC3A-206ENST00000541916 KCNA6P17658 529 aa10.76□□□□□ -0.69
FNDC3A-206ENST00000541916 PCF11O94913 1555 aaKnown RBP10.76□□□□□ -0.69
FNDC3A-206ENST00000541916 MYL6BP14649 208 aa10.75□□□□□ -0.69
FNDC3A-206ENST00000541916 BECN1Q14457 450 aa10.75□□□□□ -0.69
FNDC3A-206ENST00000541916 CNNM1Q9NRU3 951 aa10.75□□□□□ -0.69
FNDC3A-206ENST00000541916 CABLES1Q8TDN4 633 aa10.75□□□□□ -0.69
FNDC3A-206ENST00000541916 RPGRQ92834 1020 aaKnown RBP10.75□□□□□ -0.69
FNDC3A-206ENST00000541916 SLAIN2Q9P270 581 aa10.75□□□□□ -0.69
FNDC3A-206ENST00000541916 BTBD11A6QL63 1104 aa10.74□□□□□ -0.69
FNDC3A-206ENST00000541916 NEUROD6Q96NK8 337 aa10.74□□□□□ -0.69
FNDC3A-206ENST00000541916 B4GALNT3Q6L9W6 998 aa10.74□□□□□ -0.69
FNDC3A-206ENST00000541916 USHBP1Q8N6Y0 703 aa10.74□□□□□ -0.69
FNDC3A-206ENST00000541916 KIAA0556O60303 1618 aa10.74□□□□□ -0.69
FNDC3A-206ENST00000541916 KRI1Q8N9T8 703 aaKnown RBP10.74□□□□□ -0.69
FNDC3A-206ENST00000541916 GNL3LQ9NVN8 582 aaKnown RBP10.74□□□□□ -0.69
FNDC3A-206ENST00000541916 TIAM1Q13009 1591 aa10.74□□□□□ -0.69
FNDC3A-206ENST00000541916 PRKAR2BP31323 418 aa10.73□□□□□ -0.69
FNDC3A-206ENST00000541916 ZFYVE16Q7Z3T8 1539 aa10.73□□□□□ -0.69
FNDC3A-206ENST00000541916 RWDD1Q9H446 243 aaPredicted RBP10.73□□□□□ -0.69
FNDC3A-206ENST00000541916 CCDC30Q5VVM6 783 aa10.73□□□□□ -0.69
FNDC3A-206ENST00000541916 MPHOSPH8Q99549 860 aa10.73□□□□□ -0.69
FNDC3A-206ENST00000541916 RUNDC1Q96C34 613 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms