RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 MCM5P33992 734 aa13.4□□□□□ -0.27
ERBB2-204ENST00000541774 LEKR1Q6ZMV7 388 aa13.4□□□□□ -0.27
ERBB2-204ENST00000541774 SPC24Q8NBT2 197 aa13.4□□□□□ -0.27
ERBB2-204ENST00000541774 GOLGA6L19H0YKK7 550 aa13.39□□□□□ -0.27
ERBB2-204ENST00000541774 TNNT1P13805 278 aa13.39□□□□□ -0.27
ERBB2-204ENST00000541774 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
ERBB2-204ENST00000541774 IPO8O15397 1037 aaKnown RBP13.39□□□□□ -0.27
ERBB2-204ENST00000541774 MNS1Q8NEH6 495 aa13.39□□□□□ -0.27
ERBB2-204ENST00000541774 CIZ1Q9ULV3 898 aaPredicted RBP13.39□□□□□ -0.27
ERBB2-204ENST00000541774 NUTM2FA1L443 756 aa13.39□□□□□ -0.27
ERBB2-204ENST00000541774 RBM25P49756 843 aaKnown RBP13.39□□□□□ -0.27
ERBB2-204ENST00000541774 PRIMPOLQ96LW4 560 aa13.39□□□□□ -0.27
ERBB2-204ENST00000541774 PNISRQ8TF01 805 aaKnown RBP13.38□□□□□ -0.27
ERBB2-204ENST00000541774 TRAK1Q9UPV9 953 aa13.38□□□□□ -0.27
ERBB2-204ENST00000541774 GTF2F1P35269 517 aaKnown RBP eCLIP13.38□□□□□ -0.27
ERBB2-204ENST00000541774 ANKRD50Q9ULJ7 1429 aa13.38□□□□□ -0.27
ERBB2-204ENST00000541774 SMC4Q9NTJ3 1288 aa13.38□□□□□ -0.27
ERBB2-204ENST00000541774 TROQ12816 1431 aaPredicted RBP13.38□□□□□ -0.27
ERBB2-204ENST00000541774 PANK1Q8TE04 598 aa13.38□□□□□ -0.27
ERBB2-204ENST00000541774 ARHGEF11O15085 1522 aa13.37□□□□□ -0.27
ERBB2-204ENST00000541774 AK7Q96M32 723 aa13.37□□□□□ -0.27
ERBB2-204ENST00000541774 WDR97A6NE52 1622 aa13.37□□□□□ -0.27
ERBB2-204ENST00000541774 BECN2A8MW95 431 aa13.36□□□□□ -0.27
ERBB2-204ENST00000541774 RDXP35241 583 aaKnown RBP13.36□□□□□ -0.27
ERBB2-204ENST00000541774 ANKRD45Q5TZF3 282 aa13.36□□□□□ -0.27
ERBB2-204ENST00000541774 PDZRN3Q9UPQ7 1066 aa13.36□□□□□ -0.27
ERBB2-204ENST00000541774 H0YHG0 523 aa13.36□□□□□ -0.27
ERBB2-204ENST00000541774 SRPK2P78362 688 aaKnown RBP13.36□□□□□ -0.27
ERBB2-204ENST00000541774 CHMP3Q9Y3E7 222 aa13.36□□□□□ -0.27
ERBB2-204ENST00000541774 TPM4P67936 248 aa13.35□□□□□ -0.27
ERBB2-204ENST00000541774 NOC3LQ8WTT2 800 aaKnown RBP13.35□□□□□ -0.27
ERBB2-204ENST00000541774 TNPO1Q92973 898 aaKnown RBP13.35□□□□□ -0.27
ERBB2-204ENST00000541774 TERF1P54274 439 aa13.35□□□□□ -0.27
ERBB2-204ENST00000541774 SYCE3A1L190 88 aa13.35□□□□□ -0.27
ERBB2-204ENST00000541774 SKIDA1Q1XH10 827 aa13.35□□□□□ -0.27
ERBB2-204ENST00000541774 HSP90AB3PQ58FF7 597 aa13.35□□□□□ -0.27
ERBB2-204ENST00000541774 ZKSCAN5Q9Y2L8 839 aa13.35□□□□□ -0.27
ERBB2-204ENST00000541774 CUL7Q14999 1698 aa13.35□□□□□ -0.27
ERBB2-204ENST00000541774 ARHGAP5Q13017 1502 aa13.35□□□□□ -0.27
ERBB2-204ENST00000541774 DMTNQ08495 405 aa13.35□□□□□ -0.27
ERBB2-204ENST00000541774 HSP90B2PQ58FF3 399 aa13.34□□□□□ -0.27
ERBB2-204ENST00000541774 NBPF8Q3BBV2 869 aa13.34□□□□□ -0.27
ERBB2-204ENST00000541774 CERS3Q8IU89 383 aa13.34□□□□□ -0.27
ERBB2-204ENST00000541774 UACAQ9BZF9 1416 aa13.34□□□□□ -0.27
ERBB2-204ENST00000541774 CCDC144AA2RUR9 1427 aa13.33□□□□□ -0.28
ERBB2-204ENST00000541774 TOMM22Q9NS69 142 aa13.33□□□□□ -0.28
ERBB2-204ENST00000541774 ATP6V1DQ9Y5K8 247 aa13.33□□□□□ -0.28
ERBB2-204ENST00000541774 SCAPERQ9BY12 1400 aa13.33□□□□□ -0.28
ERBB2-204ENST00000541774 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
ERBB2-204ENST00000541774 BRD2P25440 801 aaKnown RBP13.32□□□□□ -0.28
ERBB2-204ENST00000541774 LMOD2Q6P5Q4 547 aa13.32□□□□□ -0.28
ERBB2-204ENST00000541774 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
ERBB2-204ENST00000541774 APAF1O14727 1248 aa13.32□□□□□ -0.28
ERBB2-204ENST00000541774 LNPKQ9C0E8 428 aa13.32□□□□□ -0.28
ERBB2-204ENST00000541774 TRIM5Q9C035 493 aa13.32□□□□□ -0.28
ERBB2-204ENST00000541774 FAM177BA6PVY3 158 aa13.32□□□□□ -0.28
ERBB2-204ENST00000541774 GORABQ5T7V8 394 aa13.32□□□□□ -0.28
ERBB2-204ENST00000541774 UTP14CQ5TAP6 766 aaKnown RBP13.32□□□□□ -0.28
ERBB2-204ENST00000541774 C20orf194Q5TEA3 1177 aa13.32□□□□□ -0.28
ERBB2-204ENST00000541774 CLGNO14967 610 aa13.31□□□□□ -0.28
ERBB2-204ENST00000541774 NAIPQ13075 1403 aa13.3□□□□□ -0.28
ERBB2-204ENST00000541774 K7ELQ4 463 aaPredicted RBP13.3□□□□□ -0.28
ERBB2-204ENST00000541774 KRT222Q8N1A0 295 aa13.3□□□□□ -0.28
ERBB2-204ENST00000541774 WWC1Q8IX03 1113 aa13.3□□□□□ -0.28
ERBB2-204ENST00000541774 POLR3GO15318 223 aaPredicted RBP13.3□□□□□ -0.28
ERBB2-204ENST00000541774 LMOD3Q0VAK6 560 aa13.3□□□□□ -0.28
ERBB2-204ENST00000541774 ZNF526Q8TF50 670 aaPredicted RBP13.3□□□□□ -0.28
ERBB2-204ENST00000541774 ZKSCAN2Q63HK3 967 aa13.3□□□□□ -0.28
ERBB2-204ENST00000541774 TMEM132EQ6IEE7 984 aa13.3□□□□□ -0.28
ERBB2-204ENST00000541774 PTPRKQ15262 1439 aa13.29□□□□□ -0.28
ERBB2-204ENST00000541774 THOC2Q8NI27 1593 aaKnown RBP13.29□□□□□ -0.28
ERBB2-204ENST00000541774 USP8P40818 1118 aa13.29□□□□□ -0.28
ERBB2-204ENST00000541774 NOL10Q9BSC4 688 aaKnown RBP13.29□□□□□ -0.28
ERBB2-204ENST00000541774 BRD4O60885 1362 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-204ENST00000541774 C8orf34Q49A92 452 aa13.29□□□□□ -0.28
ERBB2-204ENST00000541774 HS1BP3Q53T59 392 aa13.29□□□□□ -0.28
ERBB2-204ENST00000541774 EIF3AQ14152 1382 aaKnown RBP13.29□□□□□ -0.28
ERBB2-204ENST00000541774 EHBP1L1Q8N3D4 1523 aa13.28□□□□□ -0.28
ERBB2-204ENST00000541774 DHX37Q8IY37 1157 aaKnown RBP13.28□□□□□ -0.28
ERBB2-204ENST00000541774 HECW1Q76N89 1606 aa13.28□□□□□ -0.28
ERBB2-204ENST00000541774 C9orf84Q5VXU9 1444 aa13.28□□□□□ -0.28
ERBB2-204ENST00000541774 NOLC1Q14978 699 aaKnown RBP eCLIP13.28□□□□□ -0.289e-7■■□□□ 13.7
ERBB2-204ENST00000541774 RRP7AQ9Y3A4 280 aaKnown RBP13.28□□□□□ -0.28
ERBB2-204ENST00000541774 DAPK1P53355 1430 aa13.27□□□□□ -0.28
ERBB2-204ENST00000541774 SSFA2P28290 1259 aa13.27□□□□□ -0.28
ERBB2-204ENST00000541774 RTF1Q92541 710 aaKnown RBP13.27□□□□□ -0.28
ERBB2-204ENST00000541774 GIMAP7Q8NHV1 300 aa13.27□□□□□ -0.29
ERBB2-204ENST00000541774 STAC3Q96MF2 364 aa13.27□□□□□ -0.29
ERBB2-204ENST00000541774 FEZ1Q99689 392 aa13.27□□□□□ -0.29
ERBB2-204ENST00000541774 USP47Q96K76 1375 aa13.26□□□□□ -0.29
ERBB2-204ENST00000541774 KLHL40Q2TBA0 621 aa13.26□□□□□ -0.29
ERBB2-204ENST00000541774 ZNF830Q96NB3 372 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-204ENST00000541774 HFM1A2PYH4 1435 aa13.26□□□□□ -0.29
ERBB2-204ENST00000541774 BCAR3O75815 825 aa13.26□□□□□ -0.29
ERBB2-204ENST00000541774 FAM184AQ8NB25 1140 aa13.26□□□□□ -0.29
ERBB2-204ENST00000541774 HDAC5Q9UQL6 1122 aa13.26□□□□□ -0.29
ERBB2-204ENST00000541774 U2AF2P26368 475 aaKnown RBP eCLIP13.26□□□□□ -0.291e-6■□□□□ 10.6
ERBB2-204ENST00000541774 PANK3Q9H999 370 aa13.26□□□□□ -0.29
ERBB2-204ENST00000541774 OGFRQ9NZT2 677 aa13.26□□□□□ -0.29
ERBB2-204ENST00000541774 USP25Q9UHP3 1055 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms