RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 SLC6A16Q9GZN6 736 aa8.17□□□□□ -1.1
CUL3-214ENST00000541548 SPTLC1O15269 473 aa8.16□□□□□ -1.1
CUL3-214ENST00000541548 FDX1P10109 184 aa8.16□□□□□ -1.1
CUL3-214ENST00000541548 MMP16P51512 607 aa8.16□□□□□ -1.1
CUL3-214ENST00000541548 BRPF1P55201 1214 aaPredicted RBP8.16□□□□□ -1.1
CUL3-214ENST00000541548 GRIPAP1Q4V328 841 aa8.16□□□□□ -1.1
CUL3-214ENST00000541548 NUTM1Q86Y26 1132 aa8.16□□□□□ -1.1
CUL3-214ENST00000541548 ANKLE1Q8NAG6 615 aa8.16□□□□□ -1.1
CUL3-214ENST00000541548 LIMD1Q9UGP4 676 aa8.16□□□□□ -1.1
CUL3-214ENST00000541548 PCDHB15Q9Y5E8 787 aa8.16□□□□□ -1.1
CUL3-214ENST00000541548 GJA5P36382 358 aa8.15□□□□□ -1.1
CUL3-214ENST00000541548 FBXO31Q5XUX0 539 aaPredicted RBP8.15□□□□□ -1.1
CUL3-214ENST00000541548 DXOO77932 396 aaKnown RBP8.14□□□□□ -1.11
CUL3-214ENST00000541548 USB1Q9BQ65 265 aaKnown RBP8.14□□□□□ -1.11
CUL3-214ENST00000541548 Q3C1V9 767 aa8.13□□□□□ -1.11
CUL3-214ENST00000541548 LIAT1Q6ZQX7 453 aa8.13□□□□□ -1.11
CUL3-214ENST00000541548 RETREG3Q86VR2 466 aa8.12□□□□□ -1.11
CUL3-214ENST00000541548 PRKD2Q9BZL6 878 aa8.12□□□□□ -1.11
CUL3-214ENST00000541548 TUSC1Q2TAM9 212 aa8.11□□□□□ -1.11
CUL3-214ENST00000541548 TRIM67Q6ZTA4 783 aa8.11□□□□□ -1.11
CUL3-214ENST00000541548 FCF1Q9Y324 198 aaKnown RBP8.11□□□□□ -1.11
CUL3-214ENST00000541548 V9GY48 417 aaPredicted RBP8.11□□□□□ -1.11
CUL3-214ENST00000541548 GGCXP38435 758 aa8.1□□□□□ -1.11
CUL3-214ENST00000541548 QPCTQ16769 361 aa8.1□□□□□ -1.11
CUL3-214ENST00000541548 RIC3Q7Z5B4 369 aa8.1□□□□□ -1.11
CUL3-214ENST00000541548 CFAP99D6REC4 459 aa8.09□□□□□ -1.11
CUL3-214ENST00000541548 HRCP23327 699 aa8.09□□□□□ -1.11
CUL3-214ENST00000541548 DIXDC1Q155Q3 683 aa8.09□□□□□ -1.11
CUL3-214ENST00000541548 CABLES1Q8TDN4 633 aa8.09□□□□□ -1.11
CUL3-214ENST00000541548 LILRB3O75022 631 aa8.08□□□□□ -1.12
CUL3-214ENST00000541548 JUNDP17535 347 aa8.08□□□□□ -1.12
CUL3-214ENST00000541548 SH3D19Q5HYK7 790 aa8.08□□□□□ -1.12
CUL3-214ENST00000541548 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.08□□□□□ -1.12
CUL3-214ENST00000541548 CLK2P49760 499 aaKnown RBP8.07□□□□□ -1.12
CUL3-214ENST00000541548 MTMR2Q13614 643 aa8.07□□□□□ -1.12
CUL3-214ENST00000541548 SPRYD7Q5W111 196 aa8.07□□□□□ -1.12
CUL3-214ENST00000541548 C6orf229H3BNL8 230 aa8.06□□□□□ -1.12
CUL3-214ENST00000541548 SLC19A1P41440 591 aa8.06□□□□□ -1.12
CUL3-214ENST00000541548 NEUROD2Q15784 382 aa8.06□□□□□ -1.12
CUL3-214ENST00000541548 PRPF38BQ5VTL8 546 aaKnown RBP8.06□□□□□ -1.12
CUL3-214ENST00000541548 PRR7Q8TB68 274 aa8.06□□□□□ -1.12
CUL3-214ENST00000541548 DDRGK1Q96HY6 314 aa8.06□□□□□ -1.12
CUL3-214ENST00000541548 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
CUL3-214ENST00000541548 PROCA1Q8NCQ7 364 aaPredicted RBP8.05□□□□□ -1.12
CUL3-214ENST00000541548 LCE2BO14633 110 aa8.04□□□□□ -1.12
CUL3-214ENST00000541548 DESI1Q6ICB0 168 aa8.04□□□□□ -1.12
CUL3-214ENST00000541548 PTCRAQ6ISU1 281 aaPredicted RBP8.04□□□□□ -1.12
CUL3-214ENST00000541548 ZBTB3Q9H5J0 574 aa8.04□□□□□ -1.12
CUL3-214ENST00000541548 POLR3EQ9NVU0 708 aa8.04□□□□□ -1.12
CUL3-214ENST00000541548 SKIV2LQ15477 1246 aaKnown RBP8.03□□□□□ -1.12
CUL3-214ENST00000541548 CSPP1Q1MSJ5 1256 aa8.03□□□□□ -1.12
CUL3-214ENST00000541548 SPDYE5A6NIY4 337 aa8.02□□□□□ -1.13
CUL3-214ENST00000541548 PER1O15534 1290 aaPredicted RBP8.02□□□□□ -1.13
CUL3-214ENST00000541548 GDF9O60383 454 aa8.02□□□□□ -1.13
CUL3-214ENST00000541548 RPIAP49247 311 aa8.02□□□□□ -1.13
CUL3-214ENST00000541548 ZNF598Q86UK7 904 aaKnown RBP8.02□□□□□ -1.13
CUL3-214ENST00000541548 PKD2L1Q9P0L9 805 aa8.02□□□□□ -1.13
CUL3-214ENST00000541548 F12P00748 615 aaPredicted RBP8.01□□□□□ -1.13
CUL3-214ENST00000541548 PTPRNQ16849 979 aa8.01□□□□□ -1.13
CUL3-214ENST00000541548 PPP2R2DQ66LE6 453 aa8.01□□□□□ -1.13
CUL3-214ENST00000541548 RSPH6AQ9H0K4 717 aa8.01□□□□□ -1.13
CUL3-214ENST00000541548 LYPD8Q6UX82 237 aa8□□□□□ -1.13
CUL3-214ENST00000541548 NUDT12Q9BQG2 462 aa8□□□□□ -1.13
CUL3-214ENST00000541548 GOPCQ9HD26 462 aa8□□□□□ -1.13
CUL3-214ENST00000541548 SKOR1P84550 965 aa7.99□□□□□ -1.13
CUL3-214ENST00000541548 TRIM32Q13049 653 aa7.99□□□□□ -1.13
CUL3-214ENST00000541548 ZNF697Q5TEC3 545 aa7.99□□□□□ -1.13
CUL3-214ENST00000541548 IL27Q8NEV9 243 aa7.99□□□□□ -1.13
CUL3-214ENST00000541548 IRX2Q9BZI1 471 aaPredicted RBP7.99□□□□□ -1.13
CUL3-214ENST00000541548 CCNYL3P0C7X3 344 aa7.98□□□□□ -1.13
CUL3-214ENST00000541548 EVA1BQ9NVM1 165 aa7.98□□□□□ -1.13
CUL3-214ENST00000541548 PRR20EP86478 221 aa7.97□□□□□ -1.13
CUL3-214ENST00000541548 PRR20CP86479 221 aa7.97□□□□□ -1.13
CUL3-214ENST00000541548 PRR20DP86480 221 aa7.97□□□□□ -1.13
CUL3-214ENST00000541548 PRR20BP86481 221 aa7.97□□□□□ -1.13
CUL3-214ENST00000541548 PRR20AP86496 221 aa7.97□□□□□ -1.13
CUL3-214ENST00000541548 MAP10Q9P2G4 905 aa7.96□□□□□ -1.14
CUL3-214ENST00000541548 KCNH2Q12809 1159 aa7.95□□□□□ -1.14
CUL3-214ENST00000541548 GFRA3O60609 400 aa7.94□□□□□ -1.14
CUL3-214ENST00000541548 CCDC24Q8N4L8 307 aa7.94□□□□□ -1.14
CUL3-214ENST00000541548 UNC93B1Q9H1C4 597 aa7.94□□□□□ -1.14
CUL3-214ENST00000541548 TNFRSF10AO00220 468 aa7.93□□□□□ -1.14
CUL3-214ENST00000541548 NRG2O14511 850 aaPredicted RBP7.93□□□□□ -1.14
CUL3-214ENST00000541548 CTDSPL2Q05D32 466 aa7.93□□□□□ -1.14
CUL3-214ENST00000541548 TOR4AQ9NXH8 423 aa7.93□□□□□ -1.14
CUL3-214ENST00000541548 PDZRN3Q9UPQ7 1066 aa7.93□□□□□ -1.14
CUL3-214ENST00000541548 NUTM2BA6NNL0 878 aaPredicted RBP7.92□□□□□ -1.14
CUL3-214ENST00000541548 NUTM2EB1AL46 878 aaPredicted RBP7.92□□□□□ -1.14
CUL3-214ENST00000541548 SH3BP2P78314 561 aa7.92□□□□□ -1.14
CUL3-214ENST00000541548 NUTM2DQ5VT03 806 aaPredicted RBP7.92□□□□□ -1.14
CUL3-214ENST00000541548 NUTM2AQ8IVF1 878 aaPredicted RBP7.92□□□□□ -1.14
CUL3-214ENST00000541548 WNT7AO00755 349 aa7.91□□□□□ -1.14
CUL3-214ENST00000541548 RFC5P40937 340 aa7.91□□□□□ -1.14
CUL3-214ENST00000541548 LRRN4Q8WUT4 740 aa7.91□□□□□ -1.14
CUL3-214ENST00000541548 CD2BP2O95400 341 aaKnown RBP7.9□□□□□ -1.14
CUL3-214ENST00000541548 WNT7BP56706 349 aa7.9□□□□□ -1.14
CUL3-214ENST00000541548 HMX1Q9NP08 348 aaPredicted RBP7.9□□□□□ -1.14
CUL3-214ENST00000541548 SIAH2O43255 324 aa7.89□□□□□ -1.15
CUL3-214ENST00000541548 LAPTM4AQ15012 233 aa7.89□□□□□ -1.15
CUL3-214ENST00000541548 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms