RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 STAC3Q96MF2 364 aa27.94■■■□□ 2.06
RAB35-204ENST00000540803 SHPRHQ149N8 1683 aa27.93■■■□□ 2.06
RAB35-204ENST00000540803 SIRT1Q96EB6 747 aa27.92■■■□□ 2.06
RAB35-204ENST00000540803 PHF23Q9BUL5 403 aaPredicted RBP27.92■■■□□ 2.06
RAB35-204ENST00000540803 DLC1Q96QB1 1528 aa27.89■■■□□ 2.06
RAB35-204ENST00000540803 DDX17Q92841 729 aaKnown RBP27.88■■■□□ 2.05
RAB35-204ENST00000540803 ORAI2Q96SN7 254 aa27.88■■■□□ 2.05
RAB35-204ENST00000540803 FMN2Q9NZ56 1722 aa27.87■■■□□ 2.05
RAB35-204ENST00000540803 PRAM1Q96QH2 718 aa27.83■■■□□ 2.05
RAB35-204ENST00000540803 SPATA31A6Q5VVP1 1343 aa27.83■■■□□ 2.05
RAB35-204ENST00000540803 LRP6O75581 1613 aa27.82■■■□□ 2.04
RAB35-204ENST00000540803 RGS17Q9UGC6 210 aaPredicted RBP27.82■■■□□ 2.04
RAB35-204ENST00000540803 KIAA1210Q9ULL0 1709 aa27.81■■■□□ 2.04
RAB35-204ENST00000540803 TRIM26Q12899 539 aaPredicted RBP27.81■■■□□ 2.04
RAB35-204ENST00000540803 TRAK1Q9UPV9 953 aa27.8■■■□□ 2.04
RAB35-204ENST00000540803 NUTM2FA1L443 756 aa27.79■■■□□ 2.04
RAB35-204ENST00000540803 SAFB2Q14151 953 aaKnown RBP eCLIP27.79■■■□□ 2.04
RAB35-204ENST00000540803 LRRC59Q96AG4 307 aaKnown RBP27.79■■■□□ 2.04
RAB35-204ENST00000540803 RGPD8O14715 1765 aaPredicted RBP27.78■■■□□ 2.04
RAB35-204ENST00000540803 ESCO1Q5FWF5 840 aa27.78■■■□□ 2.04
RAB35-204ENST00000540803 ARHGEF28Q8N1W1 1705 aaKnown RBP27.78■■■□□ 2.04
RAB35-204ENST00000540803 SOS2Q07890 1332 aaPredicted RBP27.77■■■□□ 2.04
RAB35-204ENST00000540803 SIN3AQ96ST3 1273 aa27.77■■■□□ 2.04
RAB35-204ENST00000540803 POGKQ9P215 609 aa27.77■■■□□ 2.04
RAB35-204ENST00000540803 ADGRB2O60241 1585 aa27.77■■■□□ 2.04
RAB35-204ENST00000540803 PNPLA6Q8IY17 1366 aa27.74■■■□□ 2.03
RAB35-204ENST00000540803 SOCS7O14512 581 aa27.74■■■□□ 2.03
RAB35-204ENST00000540803 KIF1AQ12756 1690 aa27.73■■■□□ 2.03
RAB35-204ENST00000540803 NPHP3Q7Z494 1330 aa27.71■■■□□ 2.03
RAB35-204ENST00000540803 PXDNQ92626 1479 aa27.71■■■□□ 2.03
RAB35-204ENST00000540803 L3MBTL2Q969R5 705 aa27.71■■■□□ 2.03
RAB35-204ENST00000540803 USP32Q8NFA0 1604 aa27.7■■■□□ 2.03
RAB35-204ENST00000540803 NUTM2BA6NNL0 878 aaPredicted RBP27.69■■■□□ 2.02
RAB35-204ENST00000540803 NUTM2EB1AL46 878 aaPredicted RBP27.69■■■□□ 2.02
RAB35-204ENST00000540803 FOXO3O43524 673 aa27.69■■■□□ 2.02
RAB35-204ENST00000540803 NUTM2AQ8IVF1 878 aaPredicted RBP27.69■■■□□ 2.02
RAB35-204ENST00000540803 NEUROD1Q13562 356 aa27.68■■■□□ 2.02
RAB35-204ENST00000540803 MEX3CQ5U5Q3 659 aaKnown RBP27.68■■■□□ 2.02
RAB35-204ENST00000540803 NBPF1Q3BBV0 1214 aa27.67■■■□□ 2.02
RAB35-204ENST00000540803 POTEAQ6S8J7 498 aa27.67■■■□□ 2.02
RAB35-204ENST00000540803 HIRIP3Q9BW71 556 aaPredicted RBP27.67■■■□□ 2.02
RAB35-204ENST00000540803 MINK1Q8N4C8 1332 aaPredicted RBP27.67■■■□□ 2.02
RAB35-204ENST00000540803 COL22A1Q8NFW1 1626 aaPredicted RBP27.66■■■□□ 2.02
RAB35-204ENST00000540803 XPCQ01831 940 aaPredicted RBP27.65■■■□□ 2.02
RAB35-204ENST00000540803 ANKARQ7Z5J8 1434 aa27.65■■■□□ 2.02
RAB35-204ENST00000540803 PHF8Q9UPP1 1060 aa27.62■■■□□ 2.01
RAB35-204ENST00000540803 TRPM1Q7Z4N2 1603 aa27.62■■■□□ 2.01
RAB35-204ENST00000540803 TULP4Q9NRJ4 1543 aa27.62■■■□□ 2.01
RAB35-204ENST00000540803 WASLO00401 505 aaPredicted RBP27.6■■■□□ 2.01
RAB35-204ENST00000540803 EIF3AQ14152 1382 aaKnown RBP27.59■■■□□ 2.01
RAB35-204ENST00000540803 PRR36Q9H6K5 1346 aa27.58■■■□□ 2.01
RAB35-204ENST00000540803 KRT28Q7Z3Y7 464 aa27.56■■■□□ 2
RAB35-204ENST00000540803 ZNF772Q68DY9 489 aaPredicted RBP27.55■■■□□ 2
RAB35-204ENST00000540803 ITSN1Q15811 1721 aa27.54■■■□□ 2
RAB35-204ENST00000540803 SPATA31A3Q5VYP0 1347 aa27.54■■■□□ 2
RAB35-204ENST00000540803 PMFBP1Q8TBY8 1022 aa27.54■■■□□ 2
RAB35-204ENST00000540803 AFF2P51816 1311 aa27.53■■■□□ 2
RAB35-204ENST00000540803 ADAMTS2O95450 1211 aa27.53■■■□□ 2
RAB35-204ENST00000540803 C8orf37Q96NL8 207 aa27.53■■■□□ 2
RAB35-204ENST00000540803 ATP7BP35670 1465 aa27.52■■■□□ 2
RAB35-204ENST00000540803 MARF1Q9Y4F3 1742 aaKnown RBP27.52■■■□□ 2
RAB35-204ENST00000540803 QRICH2Q9H0J4 1663 aa27.51■■□□□ 1.99
RAB35-204ENST00000540803 TNS3Q68CZ2 1445 aa27.5■■□□□ 1.99
RAB35-204ENST00000540803 TRPM3Q9HCF6 1732 aaPredicted RBP27.5■■□□□ 1.99
RAB35-204ENST00000540803 PSME1Q06323 249 aa27.49■■□□□ 1.99
RAB35-204ENST00000540803 SBNO1A3KN83 1393 aa27.48■■□□□ 1.99
RAB35-204ENST00000540803 CENPJQ9HC77 1338 aaPredicted RBP27.48■■□□□ 1.99
RAB35-204ENST00000540803 NBPF8Q3BBV2 869 aa27.48■■□□□ 1.99
RAB35-204ENST00000540803 CDK19Q9BWU1 502 aa27.48■■□□□ 1.99
RAB35-204ENST00000540803 TOPAZ1Q8N9V7 1692 aa27.48■■□□□ 1.99
RAB35-204ENST00000540803 ROCK2O75116 1388 aaKnown RBP27.47■■□□□ 1.99
RAB35-204ENST00000540803 NUDT16Q96DE0 195 aaKnown RBP27.46■■□□□ 1.99
RAB35-204ENST00000540803 TONSLQ96HA7 1378 aa27.46■■□□□ 1.99
RAB35-204ENST00000540803 NGLY1Q96IV0 654 aa27.45■■□□□ 1.98
RAB35-204ENST00000540803 ABCA3Q99758 1704 aa27.44■■□□□ 1.98
RAB35-204ENST00000540803 ALS2Q96Q42 1657 aa27.43■■□□□ 1.98
RAB35-204ENST00000540803 GPRASP1Q5JY77 1395 aa27.42■■□□□ 1.98
RAB35-204ENST00000540803 ARHGEF10O15013 1369 aa27.4■■□□□ 1.98
RAB35-204ENST00000540803 FNBP4Q8N3X1 1017 aaPredicted RBP27.4■■□□□ 1.98
RAB35-204ENST00000540803 NGDNQ8NEJ9 315 aaKnown RBP27.4■■□□□ 1.98
RAB35-204ENST00000540803 RXRBP28702 533 aa27.38■■□□□ 1.97
RAB35-204ENST00000540803 LMOD2Q6P5Q4 547 aa27.38■■□□□ 1.97
RAB35-204ENST00000540803 CCDC61Q9Y6R9 512 aa27.38■■□□□ 1.97
RAB35-204ENST00000540803 QTRT2Q9H974 415 aaKnown RBP27.37■■□□□ 1.97
RAB35-204ENST00000540803 RALGAPBQ86X10 1494 aa27.37■■□□□ 1.97
RAB35-204ENST00000540803 CABLES1Q8TDN4 633 aa27.36■■□□□ 1.97
RAB35-204ENST00000540803 USP21Q9UK80 565 aa27.36■■□□□ 1.97
RAB35-204ENST00000540803 POLR3AO14802 1390 aaPredicted RBP27.35■■□□□ 1.97
RAB35-204ENST00000540803 SRPK2P78362 688 aaKnown RBP27.35■■□□□ 1.97
RAB35-204ENST00000540803 CDK12Q9NYV4 1490 aaPredicted RBP27.34■■□□□ 1.97
RAB35-204ENST00000540803 CABP2Q9NPB3 220 aa27.34■■□□□ 1.97
RAB35-204ENST00000540803 CRYBG1Q9Y4K1 1723 aa27.33■■□□□ 1.97
RAB35-204ENST00000540803 BCL9LQ86UU0 1499 aa27.33■■□□□ 1.97
RAB35-204ENST00000540803 PLEKHG3A1L390 1219 aa27.33■■□□□ 1.97
RAB35-204ENST00000540803 PLEKHG5O94827 1062 aa27.32■■□□□ 1.96
RAB35-204ENST00000540803 ACEP12821 1306 aa27.32■■□□□ 1.96
RAB35-204ENST00000540803 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.32■■□□□ 1.96
RAB35-204ENST00000540803 PPIP5K1Q6PFW1 1433 aa27.32■■□□□ 1.96
RAB35-204ENST00000540803 HAP1P54257 671 aaPredicted RBP27.31■■□□□ 1.96
RAB35-204ENST00000540803 RBM6P78332 1123 aaKnown RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms