RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 PRPF38BQ5VTL8 546 aaKnown RBP10.48□□□□□ -0.73
MRE11-209ENST00000540013 SCUBE3Q8IX30 993 aa10.48□□□□□ -0.73
MRE11-209ENST00000540013 SLC27A5Q9Y2P5 690 aa10.48□□□□□ -0.73
MRE11-209ENST00000540013 ZPR1O75312 459 aa10.47□□□□□ -0.73
MRE11-209ENST00000540013 FMNL1O95466 1100 aaPredicted RBP10.47□□□□□ -0.73
MRE11-209ENST00000540013 ITGBL1O95965 494 aaPredicted RBP10.47□□□□□ -0.73
MRE11-209ENST00000540013 NDUFV2P19404 249 aa10.47□□□□□ -0.73
MRE11-209ENST00000540013 TJAP1Q5JTD0 557 aa10.47□□□□□ -0.73
MRE11-209ENST00000540013 POLR3EQ9NVU0 708 aa10.47□□□□□ -0.73
MRE11-209ENST00000540013 KCNC4Q03721 635 aa10.46□□□□□ -0.73
MRE11-209ENST00000540013 ZBTB3Q9H5J0 574 aa10.46□□□□□ -0.73
MRE11-209ENST00000540013 CCDC180Q9P1Z9 1646 aa10.46□□□□□ -0.74
MRE11-209ENST00000540013 IFFO2Q5TF58 517 aa10.45□□□□□ -0.74
MRE11-209ENST00000540013 Q6ZNB5 142 aa10.45□□□□□ -0.74
MRE11-209ENST00000540013 LIMD1Q9UGP4 676 aa10.45□□□□□ -0.74
MRE11-209ENST00000540013 A0A0G2JS52 829 aa10.44□□□□□ -0.74
MRE11-209ENST00000540013 MTMR2Q13614 643 aa10.44□□□□□ -0.74
MRE11-209ENST00000540013 C6orf229H3BNL8 230 aa10.43□□□□□ -0.74
MRE11-209ENST00000540013 HLA-CQ95604 372 aa10.43□□□□□ -0.74
MRE11-209ENST00000540013 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.43□□□□□ -0.74
MRE11-209ENST00000540013 NUTM2BA6NNL0 878 aaPredicted RBP10.42□□□□□ -0.74
MRE11-209ENST00000540013 NUTM2EB1AL46 878 aaPredicted RBP10.42□□□□□ -0.74
MRE11-209ENST00000540013 SUPT5HO00267 1087 aaKnown RBP10.42□□□□□ -0.74
MRE11-209ENST00000540013 GUCA2AQ02747 115 aa10.42□□□□□ -0.74
MRE11-209ENST00000540013 NUTM2DQ5VT03 806 aaPredicted RBP10.42□□□□□ -0.74
MRE11-209ENST00000540013 BRICD5Q6PL45 260 aa10.42□□□□□ -0.74
MRE11-209ENST00000540013 RETREG3Q86VR2 466 aa10.42□□□□□ -0.74
MRE11-209ENST00000540013 NUTM2AQ8IVF1 878 aaPredicted RBP10.42□□□□□ -0.74
MRE11-209ENST00000540013 SPSB2Q99619 263 aa10.42□□□□□ -0.74
MRE11-209ENST00000540013 PCDHGC3Q9UN70 934 aa10.42□□□□□ -0.74
MRE11-209ENST00000540013 ADH1BP00325 375 aa10.41□□□□□ -0.74
MRE11-209ENST00000540013 CSPP1Q1MSJ5 1256 aa10.41□□□□□ -0.74
MRE11-209ENST00000540013 USB1Q9BQ65 265 aaKnown RBP10.41□□□□□ -0.74
MRE11-209ENST00000540013 LILRB3O75022 631 aa10.4□□□□□ -0.74
MRE11-209ENST00000540013 THAP11Q96EK4 314 aa10.4□□□□□ -0.74
MRE11-209ENST00000540013 PCDHB15Q9Y5E8 787 aa10.4□□□□□ -0.74
MRE11-209ENST00000540013 HRCP23327 699 aa10.39□□□□□ -0.75
MRE11-209ENST00000540013 PPP2R2DQ66LE6 453 aa10.39□□□□□ -0.75
MRE11-209ENST00000540013 PROCA1Q8NCQ7 364 aaPredicted RBP10.39□□□□□ -0.75
MRE11-209ENST00000540013 MSS51Q4VC12 460 aa10.38□□□□□ -0.75
MRE11-209ENST00000540013 RNF19BQ6ZMZ0 732 aa10.38□□□□□ -0.75
MRE11-209ENST00000540013 ZNF516Q92618 1163 aa10.38□□□□□ -0.75
MRE11-209ENST00000540013 GGCXP38435 758 aa10.37□□□□□ -0.75
MRE11-209ENST00000540013 HELBQ8NG08 1087 aaPredicted RBP10.37□□□□□ -0.75
MRE11-209ENST00000540013 QPCTQ16769 361 aa10.36□□□□□ -0.75
MRE11-209ENST00000540013 DESI1Q6ICB0 168 aa10.36□□□□□ -0.75
MRE11-209ENST00000540013 NPM2Q86SE8 214 aaKnown RBP10.36□□□□□ -0.75
MRE11-209ENST00000540013 TLL1O43897 1013 aa10.35□□□□□ -0.75
MRE11-209ENST00000540013 TMEM259Q4ZIN3 620 aa10.35□□□□□ -0.75
MRE11-209ENST00000540013 CABLES1Q8TDN4 633 aa10.35□□□□□ -0.75
MRE11-209ENST00000540013 SLC6A16Q9GZN6 736 aa10.35□□□□□ -0.75
MRE11-209ENST00000540013 PRR7Q8TB68 274 aa10.34□□□□□ -0.75
MRE11-209ENST00000540013 SYMPKQ92797 1274 aaKnown RBP10.34□□□□□ -0.75
MRE11-209ENST00000540013 RFC5P40937 340 aa10.32□□□□□ -0.76
MRE11-209ENST00000540013 ABCC9O60706 1549 aa10.32□□□□□ -0.76
MRE11-209ENST00000540013 JUNDP17535 347 aa10.31□□□□□ -0.76
MRE11-209ENST00000540013 RTL5Q5HYW3 569 aaPredicted RBP10.31□□□□□ -0.76
MRE11-209ENST00000540013 MMP16P51512 607 aa10.3□□□□□ -0.76
MRE11-209ENST00000540013 FAM160A2Q8N612 972 aaPredicted RBP10.3□□□□□ -0.76
MRE11-209ENST00000540013 NKX2-3Q8TAU0 364 aa10.3□□□□□ -0.76
MRE11-209ENST00000540013 TSC1Q92574 1164 aa10.3□□□□□ -0.76
MRE11-209ENST00000540013 CFAP99D6REC4 459 aa10.29□□□□□ -0.76
MRE11-209ENST00000540013 DXOO77932 396 aaKnown RBP10.29□□□□□ -0.76
MRE11-209ENST00000540013 BANK1Q8NDB2 785 aa10.29□□□□□ -0.76
MRE11-209ENST00000540013 TRIM26Q12899 539 aaPredicted RBP10.28□□□□□ -0.76
MRE11-209ENST00000540013 PTPRNQ16849 979 aa10.28□□□□□ -0.76
MRE11-209ENST00000540013 APBB1O00213 710 aa10.27□□□□□ -0.77
MRE11-209ENST00000540013 AP1G2O75843 785 aa10.27□□□□□ -0.77
MRE11-209ENST00000540013 S1PR4O95977 384 aa10.27□□□□□ -0.77
MRE11-209ENST00000540013 UBTFP17480 764 aaKnown RBP10.27□□□□□ -0.77
MRE11-209ENST00000540013 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.26□□□□□ -0.77
MRE11-209ENST00000540013 SOCS7O14512 581 aa10.25□□□□□ -0.77
MRE11-209ENST00000540013 LYPD8Q6UX82 237 aa10.25□□□□□ -0.77
MRE11-209ENST00000540013 ANKLE1Q8NAG6 615 aa10.25□□□□□ -0.77
MRE11-209ENST00000540013 FLIIQ13045 1269 aa10.24□□□□□ -0.77
MRE11-209ENST00000540013 PPP1R18Q6NYC8 613 aa10.24□□□□□ -0.77
MRE11-209ENST00000540013 NUDT12Q9BQG2 462 aa10.24□□□□□ -0.77
MRE11-209ENST00000540013 PRDM9Q9NQV7 894 aa10.24□□□□□ -0.77
MRE11-209ENST00000540013 CCNYL3P0C7X3 344 aa10.23□□□□□ -0.77
MRE11-209ENST00000540013 USP17L8P0C7I0 530 aa10.22□□□□□ -0.77
MRE11-209ENST00000540013 FBXO31Q5XUX0 539 aaPredicted RBP10.22□□□□□ -0.77
MRE11-209ENST00000540013 RNF223E7ERA6 249 aa10.21□□□□□ -0.77
MRE11-209ENST00000540013 CTDSPL2Q05D32 466 aa10.21□□□□□ -0.77
MRE11-209ENST00000540013 PNMA1Q8ND90 353 aa10.21□□□□□ -0.77
MRE11-209ENST00000540013 FCF1Q9Y324 198 aaKnown RBP10.21□□□□□ -0.77
MRE11-209ENST00000540013 PRM3Q9NNZ6 103 aa10.2□□□□□ -0.78
MRE11-209ENST00000540013 LCE2BO14633 110 aa10.19□□□□□ -0.78
MRE11-209ENST00000540013 CCDC24Q8N4L8 307 aa10.19□□□□□ -0.78
MRE11-209ENST00000540013 EVA1BQ9NVM1 165 aa10.19□□□□□ -0.78
MRE11-209ENST00000540013 ZBTB24O43167 697 aaPredicted RBP10.18□□□□□ -0.78
MRE11-209ENST00000540013 TRAF7Q6Q0C0 670 aa10.18□□□□□ -0.78
MRE11-209ENST00000540013 CTHP32929 405 aa10.17□□□□□ -0.78
MRE11-209ENST00000540013 KCNH2Q12809 1159 aa10.17□□□□□ -0.78
MRE11-209ENST00000540013 ARMC2Q8NEN0 867 aa10.17□□□□□ -0.78
MRE11-209ENST00000540013 PER1O15534 1290 aaPredicted RBP10.16□□□□□ -0.78
MRE11-209ENST00000540013 LAPTM4AQ15012 233 aa10.16□□□□□ -0.78
MRE11-209ENST00000540013 PPEF1O14829 653 aaPredicted RBP10.15□□□□□ -0.78
MRE11-209ENST00000540013 F12P00748 615 aaPredicted RBP10.15□□□□□ -0.78
MRE11-209ENST00000540013 RPIAP49247 311 aa10.14□□□□□ -0.79
MRE11-209ENST00000540013 MCM6Q14566 821 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms