RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 PROSER2Q86WR7 435 aaPredicted RBP33.02■■■□□ 2.88
TMEM260-202ENST00000538838 LRRC7Q96NW7 1537 aa33.02■■■□□ 2.88
TMEM260-202ENST00000538838 ADGRB2O60241 1585 aa33.01■■■□□ 2.87
TMEM260-202ENST00000538838 SBNO2Q9Y2G9 1366 aa33.01■■■□□ 2.87
TMEM260-202ENST00000538838 TESK2Q96S53 571 aa33.01■■■□□ 2.87
TMEM260-202ENST00000538838 MINK1Q8N4C8 1332 aaPredicted RBP33■■■□□ 2.87
TMEM260-202ENST00000538838 TULP4Q9NRJ4 1543 aa32.98■■■□□ 2.87
TMEM260-202ENST00000538838 TMEM94Q12767 1356 aa32.98■■■□□ 2.87
TMEM260-202ENST00000538838 ADGRL3Q9HAR2 1447 aa32.95■■■□□ 2.87
TMEM260-202ENST00000538838 DISP3Q9P2K9 1392 aa32.93■■■□□ 2.86
TMEM260-202ENST00000538838 CDC42BPGQ6DT37 1551 aa32.92■■■□□ 2.86
TMEM260-202ENST00000538838 NCOA3Q9Y6Q9 1424 aa32.9■■■□□ 2.86
TMEM260-202ENST00000538838 C14orf37Q86TY3 774 aa32.9■■■□□ 2.86
TMEM260-202ENST00000538838 FMN2Q9NZ56 1722 aa32.88■■■□□ 2.85
TMEM260-202ENST00000538838 TMF1P82094 1093 aa32.87■■■□□ 2.85
TMEM260-202ENST00000538838 EVC2Q86UK5 1308 aa32.85■■■□□ 2.85
TMEM260-202ENST00000538838 C11orf95C9JLR9 678 aaPredicted RBP32.84■■■□□ 2.85
TMEM260-202ENST00000538838 WASLO00401 505 aaPredicted RBP32.82■■■□□ 2.84
TMEM260-202ENST00000538838 SLC24A1O60721 1099 aa32.82■■■□□ 2.84
TMEM260-202ENST00000538838 USP32Q8NFA0 1604 aa32.81■■■□□ 2.84
TMEM260-202ENST00000538838 MSH6P52701 1360 aa32.81■■■□□ 2.84
TMEM260-202ENST00000538838 CDK19Q9BWU1 502 aa32.8■■■□□ 2.84
TMEM260-202ENST00000538838 RGPD8O14715 1765 aaPredicted RBP32.8■■■□□ 2.84
TMEM260-202ENST00000538838 ZNF316A6NFI3 1004 aaPredicted RBP32.8■■■□□ 2.84
TMEM260-202ENST00000538838 DCCP43146 1447 aa32.79■■■□□ 2.84
TMEM260-202ENST00000538838 C19orf44Q9H6X5 657 aa32.79■■■□□ 2.84
TMEM260-202ENST00000538838 CABP2Q9NPB3 220 aa32.78■■■□□ 2.84
TMEM260-202ENST00000538838 MYOM1P52179 1685 aa32.78■■■□□ 2.84
TMEM260-202ENST00000538838 KIF7Q2M1P5 1343 aa32.77■■■□□ 2.84
TMEM260-202ENST00000538838 SRPK2P78362 688 aaKnown RBP32.77■■■□□ 2.84
TMEM260-202ENST00000538838 TOPAZ1Q8N9V7 1692 aa32.76■■■□□ 2.84
TMEM260-202ENST00000538838 CCDC7Q96M83 1385 aa32.76■■■□□ 2.84
TMEM260-202ENST00000538838 WASHC2AQ641Q2 1341 aa32.76■■■□□ 2.83
TMEM260-202ENST00000538838 ATP7BP35670 1465 aa32.76■■■□□ 2.83
TMEM260-202ENST00000538838 ITSN1Q15811 1721 aa32.74■■■□□ 2.83
TMEM260-202ENST00000538838 POLR3GLQ9BT43 218 aa32.74■■■□□ 2.83
TMEM260-202ENST00000538838 NUTM2FA1L443 756 aa32.73■■■□□ 2.83
TMEM260-202ENST00000538838 CDCA8Q53HL2 280 aa32.73■■■□□ 2.83
TMEM260-202ENST00000538838 PRR36Q9H6K5 1346 aa32.71■■■□□ 2.83
TMEM260-202ENST00000538838 ATF3P18847 181 aa32.7■■■□□ 2.83
TMEM260-202ENST00000538838 ANKARQ7Z5J8 1434 aa32.7■■■□□ 2.83
TMEM260-202ENST00000538838 ATAD2Q6PL18 1390 aa32.69■■■□□ 2.82
TMEM260-202ENST00000538838 MST1RQ04912 1400 aa32.69■■■□□ 2.82
TMEM260-202ENST00000538838 CADPS2Q86UW7 1296 aa32.67■■■□□ 2.82
TMEM260-202ENST00000538838 NUDT16Q96DE0 195 aaKnown RBP32.67■■■□□ 2.82
TMEM260-202ENST00000538838 PUS7Q96PZ0 661 aaKnown RBP32.67■■■□□ 2.82
TMEM260-202ENST00000538838 IQSEC2Q5JU85 1478 aa32.65■■■□□ 2.82
TMEM260-202ENST00000538838 C1orf167Q5SNV9 1468 aa32.64■■■□□ 2.82
TMEM260-202ENST00000538838 PPIP5K1Q6PFW1 1433 aa32.63■■■□□ 2.81
TMEM260-202ENST00000538838 CERKQ8TCT0 537 aa32.6■■■□□ 2.81
TMEM260-202ENST00000538838 CCDC61Q9Y6R9 512 aa32.59■■■□□ 2.81
TMEM260-202ENST00000538838 TMC1Q8TDI8 760 aa32.59■■■□□ 2.81
TMEM260-202ENST00000538838 KIF1AQ12756 1690 aa32.57■■■□□ 2.81
TMEM260-202ENST00000538838 NINLQ9Y2I6 1382 aa32.57■■■□□ 2.8
TMEM260-202ENST00000538838 AKAP12Q02952 1782 aa32.56■■■□□ 2.8
TMEM260-202ENST00000538838 SLC12A5Q9H2X9 1139 aa32.56■■■□□ 2.8
TMEM260-202ENST00000538838 CABP1Q9NZU7 370 aa32.55■■■□□ 2.8
TMEM260-202ENST00000538838 ESCO1Q5FWF5 840 aa32.53■■■□□ 2.8
TMEM260-202ENST00000538838 ORAI2Q96SN7 254 aa32.53■■■□□ 2.8
TMEM260-202ENST00000538838 SLAIN2Q9P270 581 aa32.53■■■□□ 2.8
TMEM260-202ENST00000538838 CD163L1Q9NR16 1453 aa32.53■■■□□ 2.8
TMEM260-202ENST00000538838 MON2Q7Z3U7 1717 aa32.51■■■□□ 2.8
TMEM260-202ENST00000538838 PMFBP1Q8TBY8 1022 aa32.51■■■□□ 2.79
TMEM260-202ENST00000538838 ROBO1Q9Y6N7 1651 aa32.5■■■□□ 2.79
TMEM260-202ENST00000538838 PHF8Q9UPP1 1060 aa32.49■■■□□ 2.79
TMEM260-202ENST00000538838 PLEKHG3A1L390 1219 aa32.48■■■□□ 2.79
TMEM260-202ENST00000538838 A0A1W2PP64 1363 aa32.48■■■□□ 2.79
TMEM260-202ENST00000538838 DDX10Q13206 875 aaKnown RBP32.48■■■□□ 2.79
TMEM260-202ENST00000538838 ANKRD36BQ8N2N9 1353 aa32.47■■■□□ 2.79
TMEM260-202ENST00000538838 ACEP12821 1306 aa32.46■■■□□ 2.79
TMEM260-202ENST00000538838 POLR3AO14802 1390 aaPredicted RBP32.46■■■□□ 2.79
TMEM260-202ENST00000538838 CPSF1Q10570 1443 aaKnown RBP32.45■■■□□ 2.78
TMEM260-202ENST00000538838 NRKQ7Z2Y5 1582 aa32.44■■■□□ 2.78
TMEM260-202ENST00000538838 BRINP3Q76B58 766 aa32.44■■■□□ 2.78
TMEM260-202ENST00000538838 UBAP1LF5GYI3 381 aa32.44■■■□□ 2.78
TMEM260-202ENST00000538838 TOM1O60784 492 aa32.44■■■□□ 2.78
TMEM260-202ENST00000538838 PANK3Q9H999 370 aa32.44■■■□□ 2.78
TMEM260-202ENST00000538838 NHSL1Q5SYE7 1610 aa32.42■■■□□ 2.78
TMEM260-202ENST00000538838 NGDNQ8NEJ9 315 aaKnown RBP32.42■■■□□ 2.78
TMEM260-202ENST00000538838 TERF2IPQ9NYB0 399 aa32.42■■■□□ 2.78
TMEM260-202ENST00000538838 HDGFL2Q7Z4V5 671 aaPredicted RBP32.41■■■□□ 2.78
TMEM260-202ENST00000538838 KTN1Q86UP2 1357 aaKnown RBP32.39■■■□□ 2.78
TMEM260-202ENST00000538838 USP6P35125 1406 aa32.38■■■□□ 2.77
TMEM260-202ENST00000538838 FOXO3O43524 673 aa32.37■■■□□ 2.77
TMEM260-202ENST00000538838 NSD3Q9BZ95 1437 aa32.37■■■□□ 2.77
TMEM260-202ENST00000538838 CARD14Q9BXL6 1004 aa32.37■■■□□ 2.77
TMEM260-202ENST00000538838 TRPM3Q9HCF6 1732 aaPredicted RBP32.36■■■□□ 2.77
TMEM260-202ENST00000538838 PIP4K2BP78356 416 aa32.36■■■□□ 2.77
TMEM260-202ENST00000538838 DDX17Q92841 729 aaKnown RBP32.36■■■□□ 2.77
TMEM260-202ENST00000538838 KIF20BQ96Q89 1820 aa32.34■■■□□ 2.77
TMEM260-202ENST00000538838 EDC4Q6P2E9 1401 aaKnown RBP32.34■■■□□ 2.77
TMEM260-202ENST00000538838 ZNF692Q9BU19 519 aaPredicted RBP32.33■■■□□ 2.77
TMEM260-202ENST00000538838 SCAF1Q9H7N4 1312 aaKnown RBP32.33■■■□□ 2.77
TMEM260-202ENST00000538838 XPCQ01831 940 aaPredicted RBP32.33■■■□□ 2.77
TMEM260-202ENST00000538838 PXDNQ92626 1479 aa32.32■■■□□ 2.77
TMEM260-202ENST00000538838 AHDC1Q5TGY3 1603 aaPredicted RBP32.32■■■□□ 2.76
TMEM260-202ENST00000538838 NPHP3Q7Z494 1330 aa32.31■■■□□ 2.76
TMEM260-202ENST00000538838 PSME1Q06323 249 aa32.3■■■□□ 2.76
TMEM260-202ENST00000538838 SSH2Q76I76 1423 aa32.3■■■□□ 2.76
TMEM260-202ENST00000538838 PHLPP1O60346 1717 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms