RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 TBC1D2Q9BYX2 928 aa10.41□□□□□ -0.74
GCSHP4-201ENST00000538792 FDX1P10109 184 aa10.39□□□□□ -0.75
GCSHP4-201ENST00000538792 MSS51Q4VC12 460 aa10.39□□□□□ -0.75
GCSHP4-201ENST00000538792 GPBP1L1Q9HC44 474 aaPredicted RBP10.39□□□□□ -0.75
GCSHP4-201ENST00000538792 USB1Q9BQ65 265 aaKnown RBP10.38□□□□□ -0.75
GCSHP4-201ENST00000538792 V9GY48 417 aaPredicted RBP10.38□□□□□ -0.75
GCSHP4-201ENST00000538792 LIAT1Q6ZQX7 453 aa10.37□□□□□ -0.75
GCSHP4-201ENST00000538792 FCF1Q9Y324 198 aaKnown RBP10.36□□□□□ -0.75
GCSHP4-201ENST00000538792 SLC19A1P41440 591 aa10.35□□□□□ -0.75
GCSHP4-201ENST00000538792 MMP16P51512 607 aa10.34□□□□□ -0.75
GCSHP4-201ENST00000538792 TPRNQ4KMQ1 711 aa10.34□□□□□ -0.75
GCSHP4-201ENST00000538792 RSBN1LQ6PCB5 846 aaPredicted RBP10.34□□□□□ -0.75
GCSHP4-201ENST00000538792 IRX2Q9BZI1 471 aaPredicted RBP10.34□□□□□ -0.75
GCSHP4-201ENST00000538792 KDM4CQ9H3R0 1056 aa10.34□□□□□ -0.75
GCSHP4-201ENST00000538792 C6orf229H3BNL8 230 aa10.33□□□□□ -0.76
GCSHP4-201ENST00000538792 DXOO77932 396 aaKnown RBP10.33□□□□□ -0.76
GCSHP4-201ENST00000538792 PCDHB15Q9Y5E8 787 aa10.33□□□□□ -0.76
GCSHP4-201ENST00000538792 MYSM1Q5VVJ2 828 aa10.32□□□□□ -0.76
GCSHP4-201ENST00000538792 RETREG3Q86VR2 466 aa10.32□□□□□ -0.76
GCSHP4-201ENST00000538792 SPTLC1O15269 473 aa10.31□□□□□ -0.76
GCSHP4-201ENST00000538792 DIXDC1Q155Q3 683 aa10.31□□□□□ -0.76
GCSHP4-201ENST00000538792 SPRYD7Q5W111 196 aa10.31□□□□□ -0.76
GCSHP4-201ENST00000538792 RIC3Q7Z5B4 369 aa10.3□□□□□ -0.76
GCSHP4-201ENST00000538792 FAM117AQ9C073 453 aa10.3□□□□□ -0.76
GCSHP4-201ENST00000538792 LIMD1Q9UGP4 676 aa10.3□□□□□ -0.76
GCSHP4-201ENST00000538792 RB1CC1Q8TDY2 1594 aa10.3□□□□□ -0.76
GCSHP4-201ENST00000538792 GJA5P36382 358 aa10.29□□□□□ -0.76
GCSHP4-201ENST00000538792 NACADO15069 1562 aa10.28□□□□□ -0.76
GCSHP4-201ENST00000538792 JUNDP17535 347 aa10.28□□□□□ -0.76
GCSHP4-201ENST00000538792 MTMR2Q13614 643 aa10.28□□□□□ -0.76
GCSHP4-201ENST00000538792 TRIM67Q6ZTA4 783 aa10.28□□□□□ -0.76
GCSHP4-201ENST00000538792 CSPP1Q1MSJ5 1256 aa10.27□□□□□ -0.77
GCSHP4-201ENST00000538792 ZNF598Q86UK7 904 aaKnown RBP10.27□□□□□ -0.77
GCSHP4-201ENST00000538792 PLEKHG3A1L390 1219 aa10.26□□□□□ -0.77
GCSHP4-201ENST00000538792 HRCP23327 699 aa10.26□□□□□ -0.77
GCSHP4-201ENST00000538792 ZNF697Q5TEC3 545 aa10.26□□□□□ -0.77
GCSHP4-201ENST00000538792 PRR7Q8TB68 274 aa10.26□□□□□ -0.77
GCSHP4-201ENST00000538792 CABLES1Q8TDN4 633 aa10.26□□□□□ -0.77
GCSHP4-201ENST00000538792 GFRA3O60609 400 aa10.25□□□□□ -0.77
GCSHP4-201ENST00000538792 QPCTQ16769 361 aa10.25□□□□□ -0.77
GCSHP4-201ENST00000538792 CFAP99D6REC4 459 aa10.24□□□□□ -0.77
GCSHP4-201ENST00000538792 RPIAP49247 311 aa10.24□□□□□ -0.77
GCSHP4-201ENST00000538792 CCDC24Q8N4L8 307 aa10.24□□□□□ -0.77
GCSHP4-201ENST00000538792 POLR3EQ9NVU0 708 aa10.24□□□□□ -0.77
GCSHP4-201ENST00000538792 ZCCHC6Q5VYS8 1495 aaKnown RBP10.23□□□□□ -0.77
GCSHP4-201ENST00000538792 ZBTB3Q9H5J0 574 aa10.23□□□□□ -0.77
GCSHP4-201ENST00000538792 PDZRN3Q9UPQ7 1066 aa10.23□□□□□ -0.77
GCSHP4-201ENST00000538792 SPDYE5A6NIY4 337 aa10.22□□□□□ -0.77
GCSHP4-201ENST00000538792 CLK2P49760 499 aaKnown RBP10.22□□□□□ -0.77
GCSHP4-201ENST00000538792 NEUROD2Q15784 382 aa10.22□□□□□ -0.77
GCSHP4-201ENST00000538792 PRPF38BQ5VTL8 546 aaKnown RBP10.22□□□□□ -0.77
GCSHP4-201ENST00000538792 NUDT12Q9BQG2 462 aa10.22□□□□□ -0.77
GCSHP4-201ENST00000538792 GDF9O60383 454 aa10.21□□□□□ -0.77
GCSHP4-201ENST00000538792 PRKCSHP14314 528 aaPredicted RBP10.21□□□□□ -0.77
GCSHP4-201ENST00000538792 BRPF1P55201 1214 aaPredicted RBP10.21□□□□□ -0.77
GCSHP4-201ENST00000538792 TUSC1Q2TAM9 212 aa10.21□□□□□ -0.77
GCSHP4-201ENST00000538792 PTCRAQ6ISU1 281 aaPredicted RBP10.21□□□□□ -0.77
GCSHP4-201ENST00000538792 DDRGK1Q96HY6 314 aa10.21□□□□□ -0.77
GCSHP4-201ENST00000538792 RSPH6AQ9H0K4 717 aa10.21□□□□□ -0.77
GCSHP4-201ENST00000538792 LILRB3O75022 631 aa10.2□□□□□ -0.78
GCSHP4-201ENST00000538792 FBXO31Q5XUX0 539 aaPredicted RBP10.2□□□□□ -0.78
GCSHP4-201ENST00000538792 PKD2L1Q9P0L9 805 aa10.2□□□□□ -0.78
GCSHP4-201ENST00000538792 MYO15BQ96JP2 1530 aa10.19□□□□□ -0.78
GCSHP4-201ENST00000538792 TNFRSF10AO00220 468 aa10.19□□□□□ -0.78
GCSHP4-201ENST00000538792 NRG2O14511 850 aaPredicted RBP10.19□□□□□ -0.78
GCSHP4-201ENST00000538792 ZBTB24O43167 697 aaPredicted RBP10.19□□□□□ -0.78
GCSHP4-201ENST00000538792 CD2BP2O95400 341 aaKnown RBP10.19□□□□□ -0.78
GCSHP4-201ENST00000538792 TRIM32Q13049 653 aa10.19□□□□□ -0.78
GCSHP4-201ENST00000538792 RTL5Q5HYW3 569 aaPredicted RBP10.19□□□□□ -0.78
GCSHP4-201ENST00000538792 DESI1Q6ICB0 168 aa10.19□□□□□ -0.78
GCSHP4-201ENST00000538792 LAPTM4AQ15012 233 aa10.18□□□□□ -0.78
GCSHP4-201ENST00000538792 PTPRNQ16849 979 aa10.18□□□□□ -0.78
GCSHP4-201ENST00000538792 SH3D19Q5HYK7 790 aa10.18□□□□□ -0.78
GCSHP4-201ENST00000538792 PROCA1Q8NCQ7 364 aaPredicted RBP10.18□□□□□ -0.78
GCSHP4-201ENST00000538792 LCE2BO14633 110 aa10.17□□□□□ -0.78
GCSHP4-201ENST00000538792 CCNYL3P0C7X3 344 aa10.17□□□□□ -0.78
GCSHP4-201ENST00000538792 PRR20EP86478 221 aa10.17□□□□□ -0.78
GCSHP4-201ENST00000538792 PRR20CP86479 221 aa10.17□□□□□ -0.78
GCSHP4-201ENST00000538792 PRR20DP86480 221 aa10.17□□□□□ -0.78
GCSHP4-201ENST00000538792 PRR20BP86481 221 aa10.17□□□□□ -0.78
GCSHP4-201ENST00000538792 PRR20AP86496 221 aa10.17□□□□□ -0.78
GCSHP4-201ENST00000538792 FOXC1Q12948 553 aa10.17□□□□□ -0.78
GCSHP4-201ENST00000538792 SKIV2LQ15477 1246 aaKnown RBP10.17□□□□□ -0.78
GCSHP4-201ENST00000538792 Q6ZNB5 142 aa10.17□□□□□ -0.78
GCSHP4-201ENST00000538792 NUTM2BA6NNL0 878 aaPredicted RBP10.16□□□□□ -0.78
GCSHP4-201ENST00000538792 NUTM2EB1AL46 878 aaPredicted RBP10.16□□□□□ -0.78
GCSHP4-201ENST00000538792 NUTM2DQ5VT03 806 aaPredicted RBP10.16□□□□□ -0.78
GCSHP4-201ENST00000538792 LYPD8Q6UX82 237 aa10.16□□□□□ -0.78
GCSHP4-201ENST00000538792 NUTM2AQ8IVF1 878 aaPredicted RBP10.16□□□□□ -0.78
GCSHP4-201ENST00000538792 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
GCSHP4-201ENST00000538792 PER1O15534 1290 aaPredicted RBP10.15□□□□□ -0.78
GCSHP4-201ENST00000538792 SKOR1P84550 965 aa10.15□□□□□ -0.78
GCSHP4-201ENST00000538792 EVA1BQ9NVM1 165 aa10.15□□□□□ -0.78
GCSHP4-201ENST00000538792 DCAF1Q9Y4B6 1507 aa10.14□□□□□ -0.79
GCSHP4-201ENST00000538792 IL27Q8NEV9 243 aa10.14□□□□□ -0.79
GCSHP4-201ENST00000538792 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.14□□□□□ -0.79
GCSHP4-201ENST00000538792 KCNH2Q12809 1159 aa10.13□□□□□ -0.79
GCSHP4-201ENST00000538792 TSC1Q92574 1164 aa10.13□□□□□ -0.79
GCSHP4-201ENST00000538792 UNC93B1Q9H1C4 597 aa10.12□□□□□ -0.79
GCSHP4-201ENST00000538792 F12P00748 615 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms