RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 QRICH2Q9H0J4 1663 aa28.74■■■□□ 2.19
COPS7A-208ENST00000538410 ROBO1Q9Y6N7 1651 aa28.73■■■□□ 2.19
COPS7A-208ENST00000538410 TESK2Q96S53 571 aa28.73■■■□□ 2.19
COPS7A-208ENST00000538410 KNDC1Q76NI1 1749 aa28.73■■■□□ 2.19
COPS7A-208ENST00000538410 WASHC2AQ641Q2 1341 aa28.73■■■□□ 2.19
COPS7A-208ENST00000538410 SLAIN2Q9P270 581 aa28.72■■■□□ 2.19
COPS7A-208ENST00000538410 CCDC7Q96M83 1385 aa28.71■■■□□ 2.19
COPS7A-208ENST00000538410 C19orf44Q9H6X5 657 aa28.71■■■□□ 2.19
COPS7A-208ENST00000538410 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.71■■■□□ 2.19
COPS7A-208ENST00000538410 LRPPRCP42704 1394 aaKnown RBP28.7■■■□□ 2.19
COPS7A-208ENST00000538410 DLC1Q96QB1 1528 aa28.69■■■□□ 2.18
COPS7A-208ENST00000538410 STK26Q9P289 416 aa28.69■■■□□ 2.18
COPS7A-208ENST00000538410 CENPJQ9HC77 1338 aaPredicted RBP28.68■■■□□ 2.18
COPS7A-208ENST00000538410 KIF7Q2M1P5 1343 aa28.68■■■□□ 2.18
COPS7A-208ENST00000538410 ATF3P18847 181 aa28.67■■■□□ 2.18
COPS7A-208ENST00000538410 CADPS2Q86UW7 1296 aa28.67■■■□□ 2.18
COPS7A-208ENST00000538410 DIEXFQ68CQ4 756 aaKnown RBP28.66■■■□□ 2.18
COPS7A-208ENST00000538410 MED1Q15648 1581 aaPredicted RBP28.66■■■□□ 2.18
COPS7A-208ENST00000538410 ABCC11Q96J66 1382 aa28.66■■■□□ 2.18
COPS7A-208ENST00000538410 SBNO2Q9Y2G9 1366 aa28.66■■■□□ 2.18
COPS7A-208ENST00000538410 SLC24A1O60721 1099 aa28.63■■■□□ 2.17
COPS7A-208ENST00000538410 TMF1P82094 1093 aa28.63■■■□□ 2.17
COPS7A-208ENST00000538410 TECPR2O15040 1411 aa28.63■■■□□ 2.17
COPS7A-208ENST00000538410 DDX10Q13206 875 aaKnown RBP28.61■■■□□ 2.17
COPS7A-208ENST00000538410 ILDR2Q71H61 639 aa28.59■■■□□ 2.17
COPS7A-208ENST00000538410 DCCP43146 1447 aa28.59■■■□□ 2.17
COPS7A-208ENST00000538410 PHLPP1O60346 1717 aa28.57■■■□□ 2.16
COPS7A-208ENST00000538410 SIRT1Q96EB6 747 aa28.57■■■□□ 2.16
COPS7A-208ENST00000538410 PRAM1Q96QH2 718 aa28.57■■■□□ 2.16
COPS7A-208ENST00000538410 POGKQ9P215 609 aa28.56■■■□□ 2.16
COPS7A-208ENST00000538410 PTCH1Q13635 1447 aa28.55■■■□□ 2.16
COPS7A-208ENST00000538410 POLR3GLQ9BT43 218 aa28.54■■■□□ 2.16
COPS7A-208ENST00000538410 ADGRL3Q9HAR2 1447 aa28.54■■■□□ 2.16
COPS7A-208ENST00000538410 NALCNQ8IZF0 1738 aa28.53■■■□□ 2.16
COPS7A-208ENST00000538410 CDCA8Q53HL2 280 aa28.53■■■□□ 2.16
COPS7A-208ENST00000538410 ROBO2Q9HCK4 1378 aa28.52■■■□□ 2.16
COPS7A-208ENST00000538410 SAFB2Q14151 953 aaKnown RBP eCLIP28.51■■■□□ 2.15
COPS7A-208ENST00000538410 PLEKHH1Q9ULM0 1364 aa28.51■■■□□ 2.15
COPS7A-208ENST00000538410 WAPLQ7Z5K2 1190 aa28.51■■■□□ 2.15
COPS7A-208ENST00000538410 PHF23Q9BUL5 403 aaPredicted RBP28.51■■■□□ 2.15
COPS7A-208ENST00000538410 TULP4Q9NRJ4 1543 aa28.5■■■□□ 2.15
COPS7A-208ENST00000538410 MST1RQ04912 1400 aa28.48■■■□□ 2.15
COPS7A-208ENST00000538410 MYOM1P52179 1685 aa28.48■■■□□ 2.15
COPS7A-208ENST00000538410 BRINP3Q76B58 766 aa28.47■■■□□ 2.15
COPS7A-208ENST00000538410 EVC2Q86UK5 1308 aa28.46■■■□□ 2.15
COPS7A-208ENST00000538410 MINK1Q8N4C8 1332 aaPredicted RBP28.46■■■□□ 2.15
COPS7A-208ENST00000538410 COL16A1Q07092 1604 aaPredicted RBP28.46■■■□□ 2.15
COPS7A-208ENST00000538410 AHDC1Q5TGY3 1603 aaPredicted RBP28.45■■■□□ 2.15
COPS7A-208ENST00000538410 JCADQ9P266 1359 aa28.43■■■□□ 2.14
COPS7A-208ENST00000538410 PUS7Q96PZ0 661 aaKnown RBP28.41■■■□□ 2.14
COPS7A-208ENST00000538410 ADGRB2O60241 1585 aa28.4■■■□□ 2.14
COPS7A-208ENST00000538410 C1orf167Q5SNV9 1468 aa28.36■■■□□ 2.13
COPS7A-208ENST00000538410 NHSL1Q5SYE7 1610 aa28.36■■■□□ 2.13
COPS7A-208ENST00000538410 SOCS7O14512 581 aa28.35■■■□□ 2.13
COPS7A-208ENST00000538410 CDK19Q9BWU1 502 aa28.34■■■□□ 2.13
COPS7A-208ENST00000538410 SRPK2P78362 688 aaKnown RBP28.33■■■□□ 2.13
COPS7A-208ENST00000538410 CABP2Q9NPB3 220 aa28.33■■■□□ 2.13
COPS7A-208ENST00000538410 SHPRHQ149N8 1683 aa28.32■■■□□ 2.12
COPS7A-208ENST00000538410 WASLO00401 505 aaPredicted RBP28.32■■■□□ 2.12
COPS7A-208ENST00000538410 CDC42BPGQ6DT37 1551 aa28.32■■■□□ 2.12
COPS7A-208ENST00000538410 SPATA31A6Q5VVP1 1343 aa28.31■■■□□ 2.12
COPS7A-208ENST00000538410 ATAD2Q6PL18 1390 aa28.29■■■□□ 2.12
COPS7A-208ENST00000538410 ORAI2Q96SN7 254 aa28.29■■■□□ 2.12
COPS7A-208ENST00000538410 PANK3Q9H999 370 aa28.29■■■□□ 2.12
COPS7A-208ENST00000538410 RGS17Q9UGC6 210 aaPredicted RBP28.29■■■□□ 2.12
COPS7A-208ENST00000538410 MIER1Q8N108 512 aa28.28■■■□□ 2.12
COPS7A-208ENST00000538410 DDX17Q92841 729 aaKnown RBP28.28■■■□□ 2.12
COPS7A-208ENST00000538410 LRRC59Q96AG4 307 aaKnown RBP28.27■■■□□ 2.12
COPS7A-208ENST00000538410 NINLQ9Y2I6 1382 aa28.25■■■□□ 2.11
COPS7A-208ENST00000538410 TMC1Q8TDI8 760 aa28.25■■■□□ 2.11
COPS7A-208ENST00000538410 FMN2Q9NZ56 1722 aa28.23■■■□□ 2.11
COPS7A-208ENST00000538410 PER1O15534 1290 aaPredicted RBP28.23■■■□□ 2.11
COPS7A-208ENST00000538410 ANP32CO43423 234 aa28.23■■■□□ 2.11
COPS7A-208ENST00000538410 SLC12A5Q9H2X9 1139 aa28.23■■■□□ 2.11
COPS7A-208ENST00000538410 ESCO1Q5FWF5 840 aa28.22■■■□□ 2.11
COPS7A-208ENST00000538410 LRP6O75581 1613 aa28.21■■■□□ 2.11
COPS7A-208ENST00000538410 TOPAZ1Q8N9V7 1692 aa28.21■■■□□ 2.11
COPS7A-208ENST00000538410 RGPD8O14715 1765 aaPredicted RBP28.21■■■□□ 2.11
COPS7A-208ENST00000538410 MEX3CQ5U5Q3 659 aaKnown RBP28.21■■■□□ 2.11
COPS7A-208ENST00000538410 ITSN1Q15811 1721 aa28.2■■■□□ 2.11
COPS7A-208ENST00000538410 USP32Q8NFA0 1604 aa28.2■■■□□ 2.11
COPS7A-208ENST00000538410 ATP7BP35670 1465 aa28.2■■■□□ 2.11
COPS7A-208ENST00000538410 NUTM2FA1L443 756 aa28.2■■■□□ 2.1
COPS7A-208ENST00000538410 NUTM2BA6NNL0 878 aaPredicted RBP28.18■■■□□ 2.1
COPS7A-208ENST00000538410 NUTM2EB1AL46 878 aaPredicted RBP28.18■■■□□ 2.1
COPS7A-208ENST00000538410 NUTM2AQ8IVF1 878 aaPredicted RBP28.18■■■□□ 2.1
COPS7A-208ENST00000538410 NUDT16Q96DE0 195 aaKnown RBP28.18■■■□□ 2.1
COPS7A-208ENST00000538410 SOS2Q07890 1332 aaPredicted RBP28.18■■■□□ 2.1
COPS7A-208ENST00000538410 ANKRD36BQ8N2N9 1353 aa28.16■■■□□ 2.1
COPS7A-208ENST00000538410 PNPLA6Q8IY17 1366 aa28.16■■■□□ 2.1
COPS7A-208ENST00000538410 PRR36Q9H6K5 1346 aa28.15■■■□□ 2.1
COPS7A-208ENST00000538410 POTEAQ6S8J7 498 aa28.15■■■□□ 2.1
COPS7A-208ENST00000538410 PPIP5K1Q6PFW1 1433 aa28.15■■■□□ 2.1
COPS7A-208ENST00000538410 CABP1Q9NZU7 370 aa28.14■■■□□ 2.1
COPS7A-208ENST00000538410 CD163L1Q9NR16 1453 aa28.14■■■□□ 2.1
COPS7A-208ENST00000538410 NPHP3Q7Z494 1330 aa28.14■■■□□ 2.1
COPS7A-208ENST00000538410 KNSTRNQ9Y448 316 aa28.14■■■□□ 2.09
COPS7A-208ENST00000538410 CCDC61Q9Y6R9 512 aa28.14■■■□□ 2.09
COPS7A-208ENST00000538410 AKAP12Q02952 1782 aa28.13■■■□□ 2.09
COPS7A-208ENST00000538410 CARD14Q9BXL6 1004 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms