RNA–Protein interactions for RNA: ENST00000537533.1

PTPN6-209, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-209ENST00000537533 C1orf167Q5SNV9 1468 aa18.17■□□□□ 0.5
PTPN6-209ENST00000537533 DLC1Q96QB1 1528 aa18.17■□□□□ 0.5
PTPN6-209ENST00000537533 PLEKHH1Q9ULM0 1364 aa18.16■□□□□ 0.5
PTPN6-209ENST00000537533 KIAA1210Q9ULL0 1709 aa18.15■□□□□ 0.5
PTPN6-209ENST00000537533 JCADQ9P266 1359 aa18.14■□□□□ 0.49
PTPN6-209ENST00000537533 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
PTPN6-209ENST00000537533 FMN2Q9NZ56 1722 aa18.12■□□□□ 0.49
PTPN6-209ENST00000537533 PRAM1Q96QH2 718 aa18.09■□□□□ 0.49
PTPN6-209ENST00000537533 ORAI2Q96SN7 254 aa18.09■□□□□ 0.49
PTPN6-209ENST00000537533 SIN3AQ96ST3 1273 aa18.09■□□□□ 0.49
PTPN6-209ENST00000537533 ARHGEF28Q8N1W1 1705 aaKnown RBP18.08■□□□□ 0.48
PTPN6-209ENST00000537533 ADGRB2O60241 1585 aa18.08■□□□□ 0.48
PTPN6-209ENST00000537533 ILDR2Q71H61 639 aa18.07■□□□□ 0.48
PTPN6-209ENST00000537533 TRAK1Q9UPV9 953 aa18.07■□□□□ 0.48
PTPN6-209ENST00000537533 SPATA31A6Q5VVP1 1343 aa18.06■□□□□ 0.48
PTPN6-209ENST00000537533 L3MBTL2Q969R5 705 aa18.06■□□□□ 0.48
PTPN6-209ENST00000537533 RGPD8O14715 1765 aaPredicted RBP18.06■□□□□ 0.48
PTPN6-209ENST00000537533 SOS2Q07890 1332 aaPredicted RBP18.05■□□□□ 0.48
PTPN6-209ENST00000537533 LRRC59Q96AG4 307 aaKnown RBP18.05■□□□□ 0.48
PTPN6-209ENST00000537533 POGKQ9P215 609 aa18.05■□□□□ 0.48
PTPN6-209ENST00000537533 ESCO1Q5FWF5 840 aa18.04■□□□□ 0.48
PTPN6-209ENST00000537533 DDX17Q92841 729 aaKnown RBP18.04■□□□□ 0.48
PTPN6-209ENST00000537533 KIF1AQ12756 1690 aa18.03■□□□□ 0.48
PTPN6-209ENST00000537533 NEUROD1Q13562 356 aa18.02■□□□□ 0.48
PTPN6-209ENST00000537533 SAFB2Q14151 953 aaKnown RBP eCLIP18.02■□□□□ 0.48
PTPN6-209ENST00000537533 LRP6O75581 1613 aa18.01■□□□□ 0.47
PTPN6-209ENST00000537533 NPHP3Q7Z494 1330 aa18■□□□□ 0.47
PTPN6-209ENST00000537533 ANKARQ7Z5J8 1434 aa18■□□□□ 0.47
PTPN6-209ENST00000537533 NUTM2FA1L443 756 aa18■□□□□ 0.47
PTPN6-209ENST00000537533 NBPF1Q3BBV0 1214 aa18■□□□□ 0.47
PTPN6-209ENST00000537533 RGS17Q9UGC6 210 aaPredicted RBP18■□□□□ 0.47
PTPN6-209ENST00000537533 TRPM1Q7Z4N2 1603 aa18■□□□□ 0.47
PTPN6-209ENST00000537533 USP32Q8NFA0 1604 aa18■□□□□ 0.47
PTPN6-209ENST00000537533 PXDNQ92626 1479 aa18■□□□□ 0.47
PTPN6-209ENST00000537533 PNPLA6Q8IY17 1366 aa17.99■□□□□ 0.47
PTPN6-209ENST00000537533 EIF3AQ14152 1382 aaKnown RBP17.97■□□□□ 0.47
PTPN6-209ENST00000537533 FOXO3O43524 673 aa17.97■□□□□ 0.47
PTPN6-209ENST00000537533 COL22A1Q8NFW1 1626 aaPredicted RBP17.97■□□□□ 0.47
PTPN6-209ENST00000537533 MINK1Q8N4C8 1332 aaPredicted RBP17.97■□□□□ 0.47
PTPN6-209ENST00000537533 WASLO00401 505 aaPredicted RBP17.96■□□□□ 0.47
PTPN6-209ENST00000537533 TULP4Q9NRJ4 1543 aa17.96■□□□□ 0.47
PTPN6-209ENST00000537533 HIRIP3Q9BW71 556 aaPredicted RBP17.95■□□□□ 0.46
PTPN6-209ENST00000537533 PHF8Q9UPP1 1060 aa17.95■□□□□ 0.46
PTPN6-209ENST00000537533 ITSN1Q15811 1721 aa17.92■□□□□ 0.46
PTPN6-209ENST00000537533 PRR36Q9H6K5 1346 aa17.92■□□□□ 0.46
PTPN6-209ENST00000537533 NUTM2BA6NNL0 878 aaPredicted RBP17.91■□□□□ 0.46
PTPN6-209ENST00000537533 NUTM2EB1AL46 878 aaPredicted RBP17.91■□□□□ 0.46
PTPN6-209ENST00000537533 MEX3CQ5U5Q3 659 aaKnown RBP17.91■□□□□ 0.46
PTPN6-209ENST00000537533 NUTM2AQ8IVF1 878 aaPredicted RBP17.91■□□□□ 0.46
PTPN6-209ENST00000537533 TONSLQ96HA7 1378 aa17.91■□□□□ 0.46
PTPN6-209ENST00000537533 QRICH2Q9H0J4 1663 aa17.9■□□□□ 0.46
PTPN6-209ENST00000537533 SOCS7O14512 581 aa17.9■□□□□ 0.46
PTPN6-209ENST00000537533 XPCQ01831 940 aaPredicted RBP17.9■□□□□ 0.46
PTPN6-209ENST00000537533 NBPF8Q3BBV2 869 aa17.9■□□□□ 0.46
PTPN6-209ENST00000537533 KRT28Q7Z3Y7 464 aa17.9■□□□□ 0.46
PTPN6-209ENST00000537533 CENPJQ9HC77 1338 aaPredicted RBP17.9■□□□□ 0.46
PTPN6-209ENST00000537533 GPRASP1Q5JY77 1395 aa17.9■□□□□ 0.46
PTPN6-209ENST00000537533 ATP7BP35670 1465 aa17.89■□□□□ 0.45
PTPN6-209ENST00000537533 POTEAQ6S8J7 498 aa17.89■□□□□ 0.45
PTPN6-209ENST00000537533 SPATA31A3Q5VYP0 1347 aa17.89■□□□□ 0.45
PTPN6-209ENST00000537533 ROCK2O75116 1388 aaKnown RBP17.89■□□□□ 0.45
PTPN6-209ENST00000537533 TOPAZ1Q8N9V7 1692 aa17.88■□□□□ 0.45
PTPN6-209ENST00000537533 PSME1Q06323 249 aa17.88■□□□□ 0.45
PTPN6-209ENST00000537533 CDK19Q9BWU1 502 aa17.88■□□□□ 0.45
PTPN6-209ENST00000537533 SBNO1A3KN83 1393 aa17.88■□□□□ 0.45
PTPN6-209ENST00000537533 TRPM3Q9HCF6 1732 aaPredicted RBP17.87■□□□□ 0.45
PTPN6-209ENST00000537533 MARF1Q9Y4F3 1742 aaKnown RBP17.87■□□□□ 0.45
PTPN6-209ENST00000537533 ZNF772Q68DY9 489 aaPredicted RBP17.87■□□□□ 0.45
PTPN6-209ENST00000537533 PMFBP1Q8TBY8 1022 aa17.87■□□□□ 0.45
PTPN6-209ENST00000537533 NUDT16Q96DE0 195 aaKnown RBP17.87■□□□□ 0.45
PTPN6-209ENST00000537533 PCGF6Q9BYE7 350 aa17.86■□□□□ 0.45
PTPN6-209ENST00000537533 TNS3Q68CZ2 1445 aa17.86■□□□□ 0.45
PTPN6-209ENST00000537533 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
PTPN6-209ENST00000537533 ALS2Q96Q42 1657 aa17.83■□□□□ 0.45
PTPN6-209ENST00000537533 AFF2P51816 1311 aa17.83■□□□□ 0.44
PTPN6-209ENST00000537533 CLSPNQ9HAW4 1339 aa17.83■□□□□ 0.44
PTPN6-209ENST00000537533 CCDC61Q9Y6R9 512 aa17.83■□□□□ 0.44
PTPN6-209ENST00000537533 ADAMTS2O95450 1211 aa17.82■□□□□ 0.44
PTPN6-209ENST00000537533 C8orf37Q96NL8 207 aa17.82■□□□□ 0.44
PTPN6-209ENST00000537533 POLR3AO14802 1390 aaPredicted RBP17.81■□□□□ 0.44
PTPN6-209ENST00000537533 ARHGEF10O15013 1369 aa17.81■□□□□ 0.44
PTPN6-209ENST00000537533 PLEKHG3A1L390 1219 aa17.81■□□□□ 0.44
PTPN6-209ENST00000537533 NGDNQ8NEJ9 315 aaKnown RBP17.81■□□□□ 0.44
PTPN6-209ENST00000537533 ABCA3Q99758 1704 aa17.81■□□□□ 0.44
PTPN6-209ENST00000537533 FNBP4Q8N3X1 1017 aaPredicted RBP17.79■□□□□ 0.44
PTPN6-209ENST00000537533 NGLY1Q96IV0 654 aa17.79■□□□□ 0.44
PTPN6-209ENST00000537533 CARD11Q9BXL7 1154 aa17.79■□□□□ 0.44
PTPN6-209ENST00000537533 SBNO2Q9Y2G9 1366 aa17.79■□□□□ 0.44
PTPN6-209ENST00000537533 SRPK2P78362 688 aaKnown RBP17.78■□□□□ 0.44
PTPN6-209ENST00000537533 EVC2Q86UK5 1308 aa17.77■□□□□ 0.44
PTPN6-209ENST00000537533 CABP2Q9NPB3 220 aa17.77■□□□□ 0.44
PTPN6-209ENST00000537533 TIMELESSQ9UNS1 1208 aa17.77■□□□□ 0.44
PTPN6-209ENST00000537533 ACEP12821 1306 aa17.76■□□□□ 0.43
PTPN6-209ENST00000537533 CRYBG1Q9Y4K1 1723 aa17.76■□□□□ 0.43
PTPN6-209ENST00000537533 PPIP5K1Q6PFW1 1433 aa17.76■□□□□ 0.43
PTPN6-209ENST00000537533 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.75■□□□□ 0.43
PTPN6-209ENST00000537533 CDK12Q9NYV4 1490 aaPredicted RBP17.75■□□□□ 0.43
PTPN6-209ENST00000537533 RXRBP28702 533 aa17.74■□□□□ 0.43
PTPN6-209ENST00000537533 LMOD2Q6P5Q4 547 aa17.74■□□□□ 0.43
PTPN6-209ENST00000537533 USP21Q9UK80 565 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms