RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 TRAK1Q9UPV9 953 aa16.29■□□□□ 0.2
TNFRSF1A-208ENST00000536194 MST1RQ04912 1400 aa16.28■□□□□ 0.2
TNFRSF1A-208ENST00000536194 SIRT1Q96EB6 747 aa16.28■□□□□ 0.2
TNFRSF1A-208ENST00000536194 PRAM1Q96QH2 718 aa16.28■□□□□ 0.2
TNFRSF1A-208ENST00000536194 CADPS2Q86UW7 1296 aa16.27■□□□□ 0.2
TNFRSF1A-208ENST00000536194 SLAIN2Q9P270 581 aa16.27■□□□□ 0.2
TNFRSF1A-208ENST00000536194 FMN2Q9NZ56 1722 aa16.27■□□□□ 0.19
TNFRSF1A-208ENST00000536194 ADGRB2O60241 1585 aa16.26■□□□□ 0.19
TNFRSF1A-208ENST00000536194 ATF3P18847 181 aa16.26■□□□□ 0.19
TNFRSF1A-208ENST00000536194 RALGAPBQ86X10 1494 aa16.24■□□□□ 0.19
TNFRSF1A-208ENST00000536194 RGPD8O14715 1765 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-208ENST00000536194 SAFB2Q14151 953 aaKnown RBP eCLIP16.24■□□□□ 0.19
TNFRSF1A-208ENST00000536194 ROCK2O75116 1388 aaKnown RBP16.23■□□□□ 0.19
TNFRSF1A-208ENST00000536194 GPRASP1Q5JY77 1395 aa16.23■□□□□ 0.19
TNFRSF1A-208ENST00000536194 C1orf167Q5SNV9 1468 aa16.22■□□□□ 0.19
TNFRSF1A-208ENST00000536194 QRICH2Q9H0J4 1663 aa16.22■□□□□ 0.19
TNFRSF1A-208ENST00000536194 HSPA1LP34931 641 aa16.22■□□□□ 0.19
TNFRSF1A-208ENST00000536194 NHSL1Q5SYE7 1610 aa16.21■□□□□ 0.19
TNFRSF1A-208ENST00000536194 USP32Q8NFA0 1604 aa16.21■□□□□ 0.19
TNFRSF1A-208ENST00000536194 POGKQ9P215 609 aa16.21■□□□□ 0.19
TNFRSF1A-208ENST00000536194 PHLPP1O60346 1717 aa16.21■□□□□ 0.19
TNFRSF1A-208ENST00000536194 AHDC1Q5TGY3 1603 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF1A-208ENST00000536194 BRINP3Q76B58 766 aa16.2■□□□□ 0.18
TNFRSF1A-208ENST00000536194 COL16A1Q07092 1604 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-208ENST00000536194 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-208ENST00000536194 HIRIP3Q9BW71 556 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1A-208ENST00000536194 TIMELESSQ9UNS1 1208 aa16.18■□□□□ 0.18
TNFRSF1A-208ENST00000536194 NUTM2FA1L443 756 aa16.17■□□□□ 0.18
TNFRSF1A-208ENST00000536194 ORAI2Q96SN7 254 aa16.16■□□□□ 0.18
TNFRSF1A-208ENST00000536194 CENPJQ9HC77 1338 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-208ENST00000536194 TULP4Q9NRJ4 1543 aa16.14■□□□□ 0.18
TNFRSF1A-208ENST00000536194 DDX17Q92841 729 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-208ENST00000536194 CARD11Q9BXL7 1154 aa16.14■□□□□ 0.17
TNFRSF1A-208ENST00000536194 KIF1AQ12756 1690 aa16.14■□□□□ 0.17
TNFRSF1A-208ENST00000536194 PRR36Q9H6K5 1346 aa16.13■□□□□ 0.17
TNFRSF1A-208ENST00000536194 ANKARQ7Z5J8 1434 aa16.12■□□□□ 0.17
TNFRSF1A-208ENST00000536194 TOPAZ1Q8N9V7 1692 aa16.12■□□□□ 0.17
TNFRSF1A-208ENST00000536194 WASLO00401 505 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-208ENST00000536194 ITSN1Q15811 1721 aa16.11■□□□□ 0.17
TNFRSF1A-208ENST00000536194 ATP7BP35670 1465 aa16.11■□□□□ 0.17
TNFRSF1A-208ENST00000536194 ESCO1Q5FWF5 840 aa16.11■□□□□ 0.17
TNFRSF1A-208ENST00000536194 EIF3AQ14152 1382 aaKnown RBP16.11■□□□□ 0.17
TNFRSF1A-208ENST00000536194 PXDNQ92626 1479 aa16.09■□□□□ 0.17
TNFRSF1A-208ENST00000536194 SHPRHQ149N8 1683 aa16.08■□□□□ 0.17
TNFRSF1A-208ENST00000536194 CDK19Q9BWU1 502 aa16.08■□□□□ 0.16
TNFRSF1A-208ENST00000536194 SBNO2Q9Y2G9 1366 aa16.07■□□□□ 0.16
TNFRSF1A-208ENST00000536194 SOS2Q07890 1332 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1A-208ENST00000536194 FOXO3O43524 673 aa16.06■□□□□ 0.16
TNFRSF1A-208ENST00000536194 USP47Q96K76 1375 aa16.05■□□□□ 0.16
TNFRSF1A-208ENST00000536194 NUDT16Q96DE0 195 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1A-208ENST00000536194 PHF8Q9UPP1 1060 aa16.05■□□□□ 0.16
TNFRSF1A-208ENST00000536194 TRPM3Q9HCF6 1732 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1A-208ENST00000536194 MED1Q15648 1581 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-208ENST00000536194 NPHP3Q7Z494 1330 aa16.04■□□□□ 0.16
TNFRSF1A-208ENST00000536194 XPCQ01831 940 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-208ENST00000536194 PMFBP1Q8TBY8 1022 aa16.04■□□□□ 0.16
TNFRSF1A-208ENST00000536194 CABP2Q9NPB3 220 aa16.04■□□□□ 0.16
TNFRSF1A-208ENST00000536194 JCADQ9P266 1359 aa16.03■□□□□ 0.16
TNFRSF1A-208ENST00000536194 ST20-MTHFSA0A0A6YYL1 179 aa16.03■□□□□ 0.16
TNFRSF1A-208ENST00000536194 TESK2Q96S53 571 aa16.03■□□□□ 0.16
TNFRSF1A-208ENST00000536194 SRPK2P78362 688 aaKnown RBP16.02■□□□□ 0.16
TNFRSF1A-208ENST00000536194 EVC2Q86UK5 1308 aa16.01■□□□□ 0.15
TNFRSF1A-208ENST00000536194 COL22A1Q8NFW1 1626 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1A-208ENST00000536194 PNPLA6Q8IY17 1366 aa16■□□□□ 0.15
TNFRSF1A-208ENST00000536194 LRRC59Q96AG4 307 aaKnown RBP16■□□□□ 0.15
TNFRSF1A-208ENST00000536194 LRP6O75581 1613 aa16■□□□□ 0.15
TNFRSF1A-208ENST00000536194 ALS2Q96Q42 1657 aa15.99■□□□□ 0.15
TNFRSF1A-208ENST00000536194 CCDC61Q9Y6R9 512 aa15.99■□□□□ 0.15
TNFRSF1A-208ENST00000536194 PPIP5K1Q6PFW1 1433 aa15.99■□□□□ 0.15
TNFRSF1A-208ENST00000536194 KRT28Q7Z3Y7 464 aa15.98■□□□□ 0.15
TNFRSF1A-208ENST00000536194 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1A-208ENST00000536194 AKAP12Q02952 1782 aa15.98■□□□□ 0.15
TNFRSF1A-208ENST00000536194 PLEKHG3A1L390 1219 aa15.97■□□□□ 0.15
TNFRSF1A-208ENST00000536194 ABCA3Q99758 1704 aa15.97■□□□□ 0.15
TNFRSF1A-208ENST00000536194 ACEP12821 1306 aa15.96■□□□□ 0.15
TNFRSF1A-208ENST00000536194 SPATA31A3Q5VYP0 1347 aa15.96■□□□□ 0.15
TNFRSF1A-208ENST00000536194 TNS3Q68CZ2 1445 aa15.96■□□□□ 0.15
TNFRSF1A-208ENST00000536194 DISP3Q9P2K9 1392 aa15.96■□□□□ 0.15
TNFRSF1A-208ENST00000536194 SPATA31A6Q5VVP1 1343 aa15.95■□□□□ 0.14
TNFRSF1A-208ENST00000536194 PSME1Q06323 249 aa15.95■□□□□ 0.14
TNFRSF1A-208ENST00000536194 NGDNQ8NEJ9 315 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1A-208ENST00000536194 CABP1Q9NZU7 370 aa15.95■□□□□ 0.14
TNFRSF1A-208ENST00000536194 SBNO1A3KN83 1393 aa15.95■□□□□ 0.14
TNFRSF1A-208ENST00000536194 ATAD2Q6PL18 1390 aa15.95■□□□□ 0.14
TNFRSF1A-208ENST00000536194 CRYBG1Q9Y4K1 1723 aa15.94■□□□□ 0.14
TNFRSF1A-208ENST00000536194 MON2Q7Z3U7 1717 aa15.94■□□□□ 0.14
TNFRSF1A-208ENST00000536194 NRKQ7Z2Y5 1582 aa15.93■□□□□ 0.14
TNFRSF1A-208ENST00000536194 MARF1Q9Y4F3 1742 aaKnown RBP15.93■□□□□ 0.14
TNFRSF1A-208ENST00000536194 CD163L1Q9NR16 1453 aa15.92■□□□□ 0.14
TNFRSF1A-208ENST00000536194 HSPA5P11021 654 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-208ENST00000536194 MYOM1P52179 1685 aa15.92■□□□□ 0.14
TNFRSF1A-208ENST00000536194 NUTM2BA6NNL0 878 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-208ENST00000536194 NUTM2EB1AL46 878 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-208ENST00000536194 NUTM2AQ8IVF1 878 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-208ENST00000536194 USP6P35125 1406 aa15.91■□□□□ 0.14
TNFRSF1A-208ENST00000536194 CPSF1Q10570 1443 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1A-208ENST00000536194 EIF4G2P78344 907 aaKnown RBP eCLIP15.9■□□□□ 0.14
TNFRSF1A-208ENST00000536194 PUS7Q96PZ0 661 aaKnown RBP15.9■□□□□ 0.14
TNFRSF1A-208ENST00000536194 SSH2Q76I76 1423 aa15.9■□□□□ 0.14
TNFRSF1A-208ENST00000536194 PIK3C2AO00443 1686 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms