RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 HOXA2O43364 376 aa12.32□□□□□ -0.44
VBP1-203ENST00000535916 ZMYND10O75800 440 aa12.32□□□□□ -0.44
VBP1-203ENST00000535916 ZC3H15Q8WU90 426 aaKnown RBP12.32□□□□□ -0.44
VBP1-203ENST00000535916 RPIAP49247 311 aa12.31□□□□□ -0.44
VBP1-203ENST00000535916 GUCA2AQ02747 115 aa12.31□□□□□ -0.44
VBP1-203ENST00000535916 USB1Q9BQ65 265 aaKnown RBP12.29□□□□□ -0.44
VBP1-203ENST00000535916 PKD2L1Q9P0L9 805 aa12.29□□□□□ -0.44
VBP1-203ENST00000535916 FOXC1Q12948 553 aa12.28□□□□□ -0.44
VBP1-203ENST00000535916 PKDCCQ504Y2 493 aa12.28□□□□□ -0.44
VBP1-203ENST00000535916 MMP16P51512 607 aa12.27□□□□□ -0.45
VBP1-203ENST00000535916 FAM187AA6NFU0 413 aa12.26□□□□□ -0.45
VBP1-203ENST00000535916 DGAT1O75907 488 aa12.26□□□□□ -0.45
VBP1-203ENST00000535916 CD2BP2O95400 341 aaKnown RBP12.25□□□□□ -0.45
VBP1-203ENST00000535916 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
VBP1-203ENST00000535916 DXOO77932 396 aaKnown RBP12.24□□□□□ -0.45
VBP1-203ENST00000535916 SSTR3P32745 418 aaPredicted RBP12.24□□□□□ -0.45
VBP1-203ENST00000535916 TTLL12Q14166 644 aaPredicted RBP12.24□□□□□ -0.45
VBP1-203ENST00000535916 AMHR2Q16671 573 aa12.24□□□□□ -0.45
VBP1-203ENST00000535916 MYT1Q01538 1121 aa12.23□□□□□ -0.45
VBP1-203ENST00000535916 SYMPKQ92797 1274 aaKnown RBP12.23□□□□□ -0.45
VBP1-203ENST00000535916 ZBTB24O43167 697 aaPredicted RBP12.22□□□□□ -0.45
VBP1-203ENST00000535916 GIGYF2Q6Y7W6 1299 aaKnown RBP12.2□□□□□ -0.46
VBP1-203ENST00000535916 SPIRE2Q8WWL2 714 aa12.19□□□□□ -0.46
VBP1-203ENST00000535916 PCDHGC3Q9UN70 934 aa12.19□□□□□ -0.46
VBP1-203ENST00000535916 FDX1P10109 184 aa12.18□□□□□ -0.46
VBP1-203ENST00000535916 TRIM32Q13049 653 aa12.18□□□□□ -0.46
VBP1-203ENST00000535916 CCDC24Q8N4L8 307 aa12.17□□□□□ -0.46
VBP1-203ENST00000535916 TOR4AQ9NXH8 423 aa12.17□□□□□ -0.46
VBP1-203ENST00000535916 JUNDP17535 347 aa12.16□□□□□ -0.46
VBP1-203ENST00000535916 RETREG3Q86VR2 466 aa12.16□□□□□ -0.46
VBP1-203ENST00000535916 NDUFV2P19404 249 aa12.15□□□□□ -0.46
VBP1-203ENST00000535916 PARP9Q8IXQ6 854 aa12.15□□□□□ -0.46
VBP1-203ENST00000535916 CYP4X1Q8N118 509 aa12.15□□□□□ -0.46
VBP1-203ENST00000535916 MOXD2PA6NHM9 499 aa12.14□□□□□ -0.47
VBP1-203ENST00000535916 TRIM66O15016 1216 aa12.14□□□□□ -0.47
VBP1-203ENST00000535916 ST8SIA5O15466 376 aa12.14□□□□□ -0.47
VBP1-203ENST00000535916 C6orf229H3BNL8 230 aa12.13□□□□□ -0.47
VBP1-203ENST00000535916 BEGAINQ9BUH8 593 aa12.13□□□□□ -0.47
VBP1-203ENST00000535916 WNT7AO00755 349 aa12.12□□□□□ -0.47
VBP1-203ENST00000535916 AK7Q96M32 723 aa12.11□□□□□ -0.47
VBP1-203ENST00000535916 AAASQ9NRG9 546 aa12.11□□□□□ -0.47
VBP1-203ENST00000535916 MS4A1P11836 297 aa12.1□□□□□ -0.47
VBP1-203ENST00000535916 TTC24A2A3L6 582 aaPredicted RBP12.09□□□□□ -0.47
VBP1-203ENST00000535916 POTECB2RU33 542 aa12.09□□□□□ -0.47
VBP1-203ENST00000535916 MRGPRX2Q96LB1 330 aa12.09□□□□□ -0.47
VBP1-203ENST00000535916 NUDT12Q9BQG2 462 aa12.09□□□□□ -0.47
VBP1-203ENST00000535916 AVPP01185 164 aa12.07□□□□□ -0.48
VBP1-203ENST00000535916 SKOR1P84550 965 aa12.07□□□□□ -0.48
VBP1-203ENST00000535916 TBC1D2Q9BYX2 928 aa12.07□□□□□ -0.48
VBP1-203ENST00000535916 PTCRAQ6ISU1 281 aaPredicted RBP12.06□□□□□ -0.48
VBP1-203ENST00000535916 SNIP1Q8TAD8 396 aaKnown RBP12.06□□□□□ -0.48
VBP1-203ENST00000535916 CRIPAKQ8N1N5 446 aa12.05□□□□□ -0.48
VBP1-203ENST00000535916 SMPD1P17405 629 aa12.04□□□□□ -0.48
VBP1-203ENST00000535916 MTMR2Q13614 643 aa12.04□□□□□ -0.48
VBP1-203ENST00000535916 RC3H1Q5TC82 1133 aaKnown RBP12.04□□□□□ -0.48
VBP1-203ENST00000535916 PRR7Q8TB68 274 aa12.04□□□□□ -0.48
VBP1-203ENST00000535916 WNT7BP56706 349 aa12.03□□□□□ -0.48
VBP1-203ENST00000535916 RSBN1LQ6PCB5 846 aaPredicted RBP12.03□□□□□ -0.48
VBP1-203ENST00000535916 DACH1Q9UI36 760 aa12.03□□□□□ -0.48
VBP1-203ENST00000535916 J3QL48 77 aa12.02□□□□□ -0.49
VBP1-203ENST00000535916 CCNYL3P0C7X3 344 aa12.02□□□□□ -0.49
VBP1-203ENST00000535916 PDE4DQ08499 809 aa12.02□□□□□ -0.49
VBP1-203ENST00000535916 TREML4Q6UXN2 200 aa12.02□□□□□ -0.49
VBP1-203ENST00000535916 SLC24A3Q9HC58 644 aa12.02□□□□□ -0.49
VBP1-203ENST00000535916 AXIN1O15169 862 aa12.01□□□□□ -0.49
VBP1-203ENST00000535916 PTPRNQ16849 979 aa12.01□□□□□ -0.49
VBP1-203ENST00000535916 PCDHB15Q9Y5E8 787 aa12.01□□□□□ -0.49
VBP1-203ENST00000535916 GJA5P36382 358 aa12□□□□□ -0.49
VBP1-203ENST00000535916 DIXDC1Q155Q3 683 aa12□□□□□ -0.49
VBP1-203ENST00000535916 CTC1Q2NKJ3 1217 aa12□□□□□ -0.49
VBP1-203ENST00000535916 SPDYE5A6NIY4 337 aa11.99□□□□□ -0.49
VBP1-203ENST00000535916 SPTLC1O15269 473 aa11.99□□□□□ -0.49
VBP1-203ENST00000535916 SMCPP49901 116 aaPredicted RBP11.98□□□□□ -0.49
VBP1-203ENST00000535916 EVA1BQ9NVM1 165 aa11.97□□□□□ -0.49
VBP1-203ENST00000535916 DESI1Q6ICB0 168 aa11.96□□□□□ -0.49
VBP1-203ENST00000535916 RIC3Q7Z5B4 369 aa11.96□□□□□ -0.49
VBP1-203ENST00000535916 UNC93B1Q9H1C4 597 aa11.96□□□□□ -0.49
VBP1-203ENST00000535916 CFAP99D6REC4 459 aa11.95□□□□□ -0.5
VBP1-203ENST00000535916 HRCP23327 699 aa11.95□□□□□ -0.5
VBP1-203ENST00000535916 HPS1Q92902 700 aa11.95□□□□□ -0.5
VBP1-203ENST00000535916 STK17AQ9UEE5 414 aa11.95□□□□□ -0.5
VBP1-203ENST00000535916 SH3BP2P78314 561 aa11.94□□□□□ -0.5
VBP1-203ENST00000535916 KCNH2Q12809 1159 aa11.94□□□□□ -0.5
VBP1-203ENST00000535916 LINC01559Q495D7 138 aa11.94□□□□□ -0.5
VBP1-203ENST00000535916 EHBP1Q8NDI1 1231 aa11.94□□□□□ -0.5
VBP1-203ENST00000535916 CABLES1Q8TDN4 633 aa11.94□□□□□ -0.5
VBP1-203ENST00000535916 GMPR2Q9P2T1 348 aaKnown RBP11.94□□□□□ -0.5
VBP1-203ENST00000535916 CSPP1Q1MSJ5 1256 aa11.93□□□□□ -0.5
VBP1-203ENST00000535916 LCE2AQ5TA79 106 aaPredicted RBP11.93□□□□□ -0.5
VBP1-203ENST00000535916 ZBTB3Q9H5J0 574 aa11.93□□□□□ -0.5
VBP1-203ENST00000535916 LOC100996750A0A140TA64 210 aa11.92□□□□□ -0.5
VBP1-203ENST00000535916 SIAH2O43255 324 aa11.92□□□□□ -0.5
VBP1-203ENST00000535916 ALDH1A1P00352 501 aa11.92□□□□□ -0.5
VBP1-203ENST00000535916 MYSM1Q5VVJ2 828 aa11.92□□□□□ -0.5
VBP1-203ENST00000535916 BAP1Q92560 729 aa11.92□□□□□ -0.5
VBP1-203ENST00000535916 KRTAP4-6Q9BYQ5 205 aa11.92□□□□□ -0.5
VBP1-203ENST00000535916 LIMD1Q9UGP4 676 aa11.92□□□□□ -0.5
VBP1-203ENST00000535916 LYPD8Q6UX82 237 aa11.91□□□□□ -0.5
VBP1-203ENST00000535916 PRPF38BQ5VTL8 546 aaKnown RBP11.9□□□□□ -0.5
VBP1-203ENST00000535916 C11orf95C9JLR9 678 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms