RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 POGKQ9P215 609 aa31.95■■■□□ 2.71
VPS37C-202ENST00000535818 TONSLQ96HA7 1378 aa31.94■■■□□ 2.7
VPS37C-202ENST00000535818 PRAM1Q96QH2 718 aa31.94■■■□□ 2.7
VPS37C-202ENST00000535818 SAFB2Q14151 953 aaKnown RBP eCLIP31.93■■■□□ 2.7
VPS37C-202ENST00000535818 PHLPP1O60346 1717 aa31.92■■■□□ 2.7
VPS37C-202ENST00000535818 BRINP3Q76B58 766 aa31.91■■■□□ 2.7
VPS37C-202ENST00000535818 C1orf167Q5SNV9 1468 aa31.9■■■□□ 2.7
VPS37C-202ENST00000535818 NBPF1Q3BBV0 1214 aa31.86■■■□□ 2.69
VPS37C-202ENST00000535818 ARHGEF28Q8N1W1 1705 aaKnown RBP31.86■■■□□ 2.69
VPS37C-202ENST00000535818 AHDC1Q5TGY3 1603 aaPredicted RBP31.86■■■□□ 2.69
VPS37C-202ENST00000535818 TRPM1Q7Z4N2 1603 aa31.83■■■□□ 2.69
VPS37C-202ENST00000535818 FMN2Q9NZ56 1722 aa31.82■■■□□ 2.68
VPS37C-202ENST00000535818 NUTM2FA1L443 756 aa31.81■■■□□ 2.68
VPS37C-202ENST00000535818 COL16A1Q07092 1604 aaPredicted RBP31.8■■■□□ 2.68
VPS37C-202ENST00000535818 ORAI2Q96SN7 254 aa31.79■■■□□ 2.68
VPS37C-202ENST00000535818 NHSL1Q5SYE7 1610 aa31.78■■■□□ 2.68
VPS37C-202ENST00000535818 MINK1Q8N4C8 1332 aaPredicted RBP31.78■■■□□ 2.68
VPS37C-202ENST00000535818 ADGRB2O60241 1585 aa31.78■■■□□ 2.68
VPS37C-202ENST00000535818 ESCO1Q5FWF5 840 aa31.77■■■□□ 2.68
VPS37C-202ENST00000535818 HIRIP3Q9BW71 556 aaPredicted RBP31.77■■■□□ 2.68
VPS37C-202ENST00000535818 ROCK2O75116 1388 aaKnown RBP31.77■■■□□ 2.68
VPS37C-202ENST00000535818 CLSPNQ9HAW4 1339 aa31.76■■■□□ 2.68
VPS37C-202ENST00000535818 NBPF8Q3BBV2 869 aa31.74■■■□□ 2.67
VPS37C-202ENST00000535818 JCADQ9P266 1359 aa31.73■■■□□ 2.67
VPS37C-202ENST00000535818 DDX17Q92841 729 aaKnown RBP31.73■■■□□ 2.67
VPS37C-202ENST00000535818 MED1Q15648 1581 aaPredicted RBP31.73■■■□□ 2.67
VPS37C-202ENST00000535818 CCER1Q8TC90 406 aaPredicted RBP31.72■■■□□ 2.67
VPS37C-202ENST00000535818 DISP3Q9P2K9 1392 aa31.7■■■□□ 2.67
VPS37C-202ENST00000535818 EIF3AQ14152 1382 aaKnown RBP31.69■■■□□ 2.66
VPS37C-202ENST00000535818 CENPJQ9HC77 1338 aaPredicted RBP31.67■■■□□ 2.66
VPS37C-202ENST00000535818 KIF1AQ12756 1690 aa31.67■■■□□ 2.66
VPS37C-202ENST00000535818 ANKARQ7Z5J8 1434 aa31.66■■■□□ 2.66
VPS37C-202ENST00000535818 WASLO00401 505 aaPredicted RBP31.66■■■□□ 2.66
VPS37C-202ENST00000535818 NPHP3Q7Z494 1330 aa31.66■■■□□ 2.66
VPS37C-202ENST00000535818 RGPD8O14715 1765 aaPredicted RBP31.66■■■□□ 2.66
VPS37C-202ENST00000535818 RALGAPBQ86X10 1494 aa31.65■■■□□ 2.66
VPS37C-202ENST00000535818 TULP4Q9NRJ4 1543 aa31.65■■■□□ 2.66
VPS37C-202ENST00000535818 LRRC59Q96AG4 307 aaKnown RBP31.64■■■□□ 2.66
VPS37C-202ENST00000535818 SHPRHQ149N8 1683 aa31.64■■■□□ 2.65
VPS37C-202ENST00000535818 GPRASP1Q5JY77 1395 aa31.63■■■□□ 2.65
VPS37C-202ENST00000535818 USP32Q8NFA0 1604 aa31.63■■■□□ 2.65
VPS37C-202ENST00000535818 QRICH2Q9H0J4 1663 aa31.63■■■□□ 2.65
VPS37C-202ENST00000535818 FOXO3O43524 673 aa31.62■■■□□ 2.65
VPS37C-202ENST00000535818 CARD11Q9BXL7 1154 aa31.61■■■□□ 2.65
VPS37C-202ENST00000535818 PHF8Q9UPP1 1060 aa31.61■■■□□ 2.65
VPS37C-202ENST00000535818 SOS2Q07890 1332 aaPredicted RBP31.6■■■□□ 2.65
VPS37C-202ENST00000535818 PHF23Q9BUL5 403 aaPredicted RBP31.58■■■□□ 2.65
VPS37C-202ENST00000535818 SPATA31A6Q5VVP1 1343 aa31.57■■■□□ 2.64
VPS37C-202ENST00000535818 XPCQ01831 940 aaPredicted RBP31.57■■■□□ 2.64
VPS37C-202ENST00000535818 TIMELESSQ9UNS1 1208 aa31.57■■■□□ 2.64
VPS37C-202ENST00000535818 PRR36Q9H6K5 1346 aa31.56■■■□□ 2.64
VPS37C-202ENST00000535818 CDK19Q9BWU1 502 aa31.56■■■□□ 2.64
VPS37C-202ENST00000535818 PXDNQ92626 1479 aa31.56■■■□□ 2.64
VPS37C-202ENST00000535818 PMFBP1Q8TBY8 1022 aa31.54■■■□□ 2.64
VPS37C-202ENST00000535818 PNPLA6Q8IY17 1366 aa31.54■■■□□ 2.64
VPS37C-202ENST00000535818 ITSN1Q15811 1721 aa31.53■■■□□ 2.64
VPS37C-202ENST00000535818 ATP7BP35670 1465 aa31.52■■■□□ 2.64
VPS37C-202ENST00000535818 NUDT16Q96DE0 195 aaKnown RBP31.52■■■□□ 2.64
VPS37C-202ENST00000535818 SRPK2P78362 688 aaKnown RBP31.5■■■□□ 2.63
VPS37C-202ENST00000535818 KRT28Q7Z3Y7 464 aa31.5■■■□□ 2.63
VPS37C-202ENST00000535818 NUTM2BA6NNL0 878 aaPredicted RBP31.49■■■□□ 2.63
VPS37C-202ENST00000535818 NUTM2EB1AL46 878 aaPredicted RBP31.49■■■□□ 2.63
VPS37C-202ENST00000535818 NUTM2AQ8IVF1 878 aaPredicted RBP31.49■■■□□ 2.63
VPS37C-202ENST00000535818 PSME1Q06323 249 aa31.48■■■□□ 2.63
VPS37C-202ENST00000535818 MEX3CQ5U5Q3 659 aaKnown RBP31.48■■■□□ 2.63
VPS37C-202ENST00000535818 LRP6O75581 1613 aa31.48■■■□□ 2.63
VPS37C-202ENST00000535818 EVC2Q86UK5 1308 aa31.46■■■□□ 2.63
VPS37C-202ENST00000535818 NGDNQ8NEJ9 315 aaKnown RBP31.45■■■□□ 2.63
VPS37C-202ENST00000535818 TOPAZ1Q8N9V7 1692 aa31.44■■■□□ 2.62
VPS37C-202ENST00000535818 CABP2Q9NPB3 220 aa31.44■■■□□ 2.62
VPS37C-202ENST00000535818 CCDC61Q9Y6R9 512 aa31.43■■■□□ 2.62
VPS37C-202ENST00000535818 SPATA31A3Q5VYP0 1347 aa31.41■■■□□ 2.62
VPS37C-202ENST00000535818 COL22A1Q8NFW1 1626 aaPredicted RBP31.41■■■□□ 2.62
VPS37C-202ENST00000535818 TNS3Q68CZ2 1445 aa31.41■■■□□ 2.62
VPS37C-202ENST00000535818 SBNO1A3KN83 1393 aa31.39■■■□□ 2.62
VPS37C-202ENST00000535818 SBNO2Q9Y2G9 1366 aa31.39■■■□□ 2.62
VPS37C-202ENST00000535818 LMOD2Q6P5Q4 547 aa31.37■■■□□ 2.61
VPS37C-202ENST00000535818 PPIP5K1Q6PFW1 1433 aa31.37■■■□□ 2.61
VPS37C-202ENST00000535818 ACEP12821 1306 aa31.34■■■□□ 2.61
VPS37C-202ENST00000535818 TRPM3Q9HCF6 1732 aaPredicted RBP31.34■■■□□ 2.61
VPS37C-202ENST00000535818 ARHGEF10O15013 1369 aa31.33■■■□□ 2.61
VPS37C-202ENST00000535818 PLEKHG3A1L390 1219 aa31.33■■■□□ 2.61
VPS37C-202ENST00000535818 ADAMTS2O95450 1211 aa31.33■■■□□ 2.61
VPS37C-202ENST00000535818 POLR3AO14802 1390 aaPredicted RBP31.32■■■□□ 2.6
VPS37C-202ENST00000535818 USP47Q96K76 1375 aa31.31■■■□□ 2.6
VPS37C-202ENST00000535818 ST20-MTHFSA0A0A6YYL1 179 aa31.31■■■□□ 2.6
VPS37C-202ENST00000535818 PAK3O75914 559 aaPredicted RBP31.31■■■□□ 2.6
VPS37C-202ENST00000535818 RGS17Q9UGC6 210 aaPredicted RBP31.3■■■□□ 2.6
VPS37C-202ENST00000535818 C8orf37Q96NL8 207 aa31.29■■■□□ 2.6
VPS37C-202ENST00000535818 ATAD2Q6PL18 1390 aa31.29■■■□□ 2.6
VPS37C-202ENST00000535818 PLEKHG5O94827 1062 aa31.28■■■□□ 2.6
VPS37C-202ENST00000535818 HAP1P54257 671 aaPredicted RBP31.28■■■□□ 2.6
VPS37C-202ENST00000535818 ILDR2Q71H61 639 aa31.28■■■□□ 2.6
VPS37C-202ENST00000535818 CABP1Q9NZU7 370 aa31.28■■■□□ 2.6
VPS37C-202ENST00000535818 ALS2Q96Q42 1657 aa31.26■■■□□ 2.6
VPS37C-202ENST00000535818 AFF2P51816 1311 aa31.24■■■□□ 2.59
VPS37C-202ENST00000535818 SLC24A1O60721 1099 aa31.23■■■□□ 2.59
VPS37C-202ENST00000535818 ZNF772Q68DY9 489 aaPredicted RBP31.23■■■□□ 2.59
VPS37C-202ENST00000535818 NGLY1Q96IV0 654 aa31.22■■■□□ 2.59
VPS37C-202ENST00000535818 TESK2Q96S53 571 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms