RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 TRIM67Q6ZTA4 783 aa14.05□□□□□ -0.16
LMO3-212ENST00000535535 PDZRN3Q9UPQ7 1066 aa14.05□□□□□ -0.16
LMO3-212ENST00000535535 WDR62O43379 1518 aa14.04□□□□□ -0.16
LMO3-212ENST00000535535 GPCPD1Q9NPB8 672 aa14.04□□□□□ -0.16
LMO3-212ENST00000535535 MROH2BQ7Z745 1585 aa14.04□□□□□ -0.16
LMO3-212ENST00000535535 BRICD5Q6PL45 260 aa14.03□□□□□ -0.16
LMO3-212ENST00000535535 FAM160A2Q8N612 972 aaPredicted RBP14.03□□□□□ -0.16
LMO3-212ENST00000535535 CLCN1P35523 988 aa14.02□□□□□ -0.16
LMO3-212ENST00000535535 GRIPAP1Q4V328 841 aa14.02□□□□□ -0.16
LMO3-212ENST00000535535 RNF19BQ6ZMZ0 732 aa14.02□□□□□ -0.16
LMO3-212ENST00000535535 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.17
LMO3-212ENST00000535535 KDM4AO75164 1064 aa14.01□□□□□ -0.17
LMO3-212ENST00000535535 ZMYND10O75800 440 aa14.01□□□□□ -0.17
LMO3-212ENST00000535535 BARGINQ6ZT62 677 aa14.01□□□□□ -0.17
LMO3-212ENST00000535535 PRDM9Q9NQV7 894 aa14.01□□□□□ -0.17
LMO3-212ENST00000535535 FAM217BQ9NTX9 383 aaPredicted RBP14.01□□□□□ -0.17
LMO3-212ENST00000535535 ZNF598Q86UK7 904 aaKnown RBP14□□□□□ -0.17
LMO3-212ENST00000535535 ZC3H15Q8WU90 426 aaKnown RBP13.99□□□□□ -0.17
LMO3-212ENST00000535535 MSS51Q4VC12 460 aa13.99□□□□□ -0.17
LMO3-212ENST00000535535 MYT1Q01538 1121 aa13.98□□□□□ -0.17
LMO3-212ENST00000535535 CADPSQ9ULU8 1353 aa13.97□□□□□ -0.17
LMO3-212ENST00000535535 USP46P62068 366 aa13.97□□□□□ -0.17
LMO3-212ENST00000535535 ZNF697Q5TEC3 545 aa13.97□□□□□ -0.17
LMO3-212ENST00000535535 REPIN1Q9BWE0 567 aaKnown RBP13.97□□□□□ -0.17
LMO3-212ENST00000535535 FCF1Q9Y324 198 aaKnown RBP13.97□□□□□ -0.17
LMO3-212ENST00000535535 Q3C1V9 767 aa13.96□□□□□ -0.17
LMO3-212ENST00000535535 HLA-CQ95604 372 aa13.96□□□□□ -0.17
LMO3-212ENST00000535535 HOXA2O43364 376 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 PRR20EP86478 221 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 PRR20CP86479 221 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 PRR20DP86480 221 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 PRR20BP86481 221 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 PRR20AP86496 221 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 TRAF7Q6Q0C0 670 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 KRI1Q8N9T8 703 aaKnown RBP13.94□□□□□ -0.18
LMO3-212ENST00000535535 GDF9O60383 454 aa13.92□□□□□ -0.18
LMO3-212ENST00000535535 AMHR2Q16671 573 aa13.92□□□□□ -0.18
LMO3-212ENST00000535535 RPIAP49247 311 aa13.9□□□□□ -0.18
LMO3-212ENST00000535535 CEP164Q9UPV0 1460 aa13.9□□□□□ -0.18
LMO3-212ENST00000535535 WIZO95785 1651 aa13.9□□□□□ -0.18
LMO3-212ENST00000535535 MMP16P51512 607 aa13.89□□□□□ -0.19
LMO3-212ENST00000535535 GUCA2AQ02747 115 aa13.88□□□□□ -0.19
LMO3-212ENST00000535535 USB1Q9BQ65 265 aaKnown RBP13.88□□□□□ -0.19
LMO3-212ENST00000535535 TNFRSF10AO00220 468 aa13.87□□□□□ -0.19
LMO3-212ENST00000535535 PKD2L1Q9P0L9 805 aa13.87□□□□□ -0.19
LMO3-212ENST00000535535 DXOO77932 396 aaKnown RBP13.86□□□□□ -0.19
LMO3-212ENST00000535535 TTLL12Q14166 644 aaPredicted RBP13.86□□□□□ -0.19
LMO3-212ENST00000535535 SSTR3P32745 418 aaPredicted RBP13.85□□□□□ -0.19
LMO3-212ENST00000535535 FANCD2Q9BXW9 1451 aa13.85□□□□□ -0.19
LMO3-212ENST00000535535 NUTM1Q86Y26 1132 aa13.84□□□□□ -0.19
LMO3-212ENST00000535535 GIGYF2Q6Y7W6 1299 aaKnown RBP13.83□□□□□ -0.2
LMO3-212ENST00000535535 DGAT1O75907 488 aa13.8□□□□□ -0.2
LMO3-212ENST00000535535 CD2BP2O95400 341 aaKnown RBP13.8□□□□□ -0.2
LMO3-212ENST00000535535 PKDCCQ504Y2 493 aa13.8□□□□□ -0.2
LMO3-212ENST00000535535 SPIRE2Q8WWL2 714 aa13.8□□□□□ -0.2
LMO3-212ENST00000535535 SYMPKQ92797 1274 aaKnown RBP13.8□□□□□ -0.2
LMO3-212ENST00000535535 RIMBP3CA6NJZ7 1639 aa13.8□□□□□ -0.2
LMO3-212ENST00000535535 RIMBP3BA6NNM3 1639 aa13.8□□□□□ -0.2
LMO3-212ENST00000535535 RIMBP3Q9UFD9 1639 aa13.8□□□□□ -0.2
LMO3-212ENST00000535535 FOXC1Q12948 553 aa13.79□□□□□ -0.2
LMO3-212ENST00000535535 PARP9Q8IXQ6 854 aa13.79□□□□□ -0.2
LMO3-212ENST00000535535 PCDHGC3Q9UN70 934 aa13.79□□□□□ -0.2
LMO3-212ENST00000535535 CFTRP13569 1480 aa13.79□□□□□ -0.2
LMO3-212ENST00000535535 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
LMO3-212ENST00000535535 TTBK1Q5TCY1 1321 aaPredicted RBP13.77□□□□□ -0.2
LMO3-212ENST00000535535 FAM187AA6NFU0 413 aa13.77□□□□□ -0.21
LMO3-212ENST00000535535 TRIM66O15016 1216 aa13.77□□□□□ -0.21
LMO3-212ENST00000535535 FDX1P10109 184 aa13.77□□□□□ -0.21
LMO3-212ENST00000535535 URB2Q14146 1524 aaKnown RBP13.77□□□□□ -0.21
LMO3-212ENST00000535535 JUNDP17535 347 aa13.76□□□□□ -0.21
LMO3-212ENST00000535535 RETREG3Q86VR2 466 aa13.76□□□□□ -0.21
LMO3-212ENST00000535535 ZBTB24O43167 697 aaPredicted RBP13.75□□□□□ -0.21
LMO3-212ENST00000535535 TRIM32Q13049 653 aa13.75□□□□□ -0.21
LMO3-212ENST00000535535 AK7Q96M32 723 aa13.75□□□□□ -0.21
LMO3-212ENST00000535535 MOXD2PA6NHM9 499 aa13.74□□□□□ -0.21
LMO3-212ENST00000535535 TOR4AQ9NXH8 423 aa13.74□□□□□ -0.21
LMO3-212ENST00000535535 BEGAINQ9BUH8 593 aa13.73□□□□□ -0.21
LMO3-212ENST00000535535 NDUFV2P19404 249 aa13.72□□□□□ -0.21
LMO3-212ENST00000535535 MS4A1P11836 297 aa13.71□□□□□ -0.21
LMO3-212ENST00000535535 C6orf229H3BNL8 230 aa13.69□□□□□ -0.22
LMO3-212ENST00000535535 WNT7AO00755 349 aa13.69□□□□□ -0.22
LMO3-212ENST00000535535 CCDC24Q8N4L8 307 aa13.69□□□□□ -0.22
LMO3-212ENST00000535535 ARHGEF11O15085 1522 aa13.69□□□□□ -0.22
LMO3-212ENST00000535535 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
LMO3-212ENST00000535535 TBC1D2Q9BYX2 928 aa13.67□□□□□ -0.22
LMO3-212ENST00000535535 CYP4X1Q8N118 509 aa13.67□□□□□ -0.22
LMO3-212ENST00000535535 NUDT12Q9BQG2 462 aa13.66□□□□□ -0.22
LMO3-212ENST00000535535 ST8SIA5O15466 376 aa13.64□□□□□ -0.23
LMO3-212ENST00000535535 GJA5P36382 358 aa13.64□□□□□ -0.23
LMO3-212ENST00000535535 ZNF787Q6DD87 383 aa13.64□□□□□ -0.23
LMO3-212ENST00000535535 RSBN1LQ6PCB5 846 aaPredicted RBP13.64□□□□□ -0.23
LMO3-212ENST00000535535 ZNF608Q9ULD9 1512 aaPredicted RBP13.64□□□□□ -0.23
LMO3-212ENST00000535535 AVPP01185 164 aa13.63□□□□□ -0.23
LMO3-212ENST00000535535 SKOR1P84550 965 aa13.63□□□□□ -0.23
LMO3-212ENST00000535535 PDE4DQ08499 809 aa13.63□□□□□ -0.23
LMO3-212ENST00000535535 SLC24A3Q9HC58 644 aa13.63□□□□□ -0.23
LMO3-212ENST00000535535 AAASQ9NRG9 546 aa13.63□□□□□ -0.23
LMO3-212ENST00000535535 MTMR2Q13614 643 aa13.62□□□□□ -0.23
LMO3-212ENST00000535535 DIXDC1Q155Q3 683 aa13.62□□□□□ -0.23
LMO3-212ENST00000535535 CRIPAKQ8N1N5 446 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms