RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 IPO9Q96P70 1041 aaKnown RBP24.57■■□□□ 1.52
COPS7A-204ENST00000534947 CGNL1Q0VF96 1302 aa24.57■■□□□ 1.52
COPS7A-204ENST00000534947 ANKRD36BQ8N2N9 1353 aa24.57■■□□□ 1.52
COPS7A-204ENST00000534947 TMEM132EQ6IEE7 984 aa24.56■■□□□ 1.52
COPS7A-204ENST00000534947 CCDC146Q8IYE0 955 aa24.56■■□□□ 1.52
COPS7A-204ENST00000534947 TMEM131LA2VDJ0 1609 aa24.56■■□□□ 1.52
COPS7A-204ENST00000534947 SLC12A5Q9H2X9 1139 aa24.55■■□□□ 1.52
COPS7A-204ENST00000534947 YEATS2Q9ULM3 1422 aa24.55■■□□□ 1.52
COPS7A-204ENST00000534947 NCBP3Q53F19 620 aaKnown RBP24.54■■□□□ 1.52
COPS7A-204ENST00000534947 KDM2BQ8NHM5 1336 aa24.54■■□□□ 1.52
COPS7A-204ENST00000534947 REREQ9P2R6 1566 aa24.53■■□□□ 1.52
COPS7A-204ENST00000534947 IDI1Q13907 227 aa24.52■■□□□ 1.52
COPS7A-204ENST00000534947 CENPQQ7L2Z9 268 aaPredicted RBP24.52■■□□□ 1.52
COPS7A-204ENST00000534947 MYO5BQ9ULV0 1848 aa24.52■■□□□ 1.52
COPS7A-204ENST00000534947 C20orf194Q5TEA3 1177 aa24.52■■□□□ 1.52
COPS7A-204ENST00000534947 BACH2Q9BYV9 841 aa24.52■■□□□ 1.52
COPS7A-204ENST00000534947 PDE4AP27815 886 aa24.51■■□□□ 1.51
COPS7A-204ENST00000534947 IQSEC2Q5JU85 1478 aa24.51■■□□□ 1.51
COPS7A-204ENST00000534947 CLTCQ00610 1675 aaKnown RBP24.5■■□□□ 1.51
COPS7A-204ENST00000534947 RUNDC1Q96C34 613 aa24.49■■□□□ 1.51
COPS7A-204ENST00000534947 CFAP53Q96M91 514 aa24.49■■□□□ 1.51
COPS7A-204ENST00000534947 WWC1Q8IX03 1113 aa24.47■■□□□ 1.51
COPS7A-204ENST00000534947 SPINK5Q9NQ38 1064 aaPredicted RBP24.47■■□□□ 1.51
COPS7A-204ENST00000534947 PPP6R1Q9UPN7 881 aa24.47■■□□□ 1.51
COPS7A-204ENST00000534947 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
COPS7A-204ENST00000534947 AGLP35573 1532 aa24.46■■□□□ 1.51
COPS7A-204ENST00000534947 PTPRMP28827 1452 aa24.45■■□□□ 1.5
COPS7A-204ENST00000534947 CCDC27Q2M243 656 aa24.44■■□□□ 1.5
COPS7A-204ENST00000534947 ATAD2Q6PL18 1390 aa24.44■■□□□ 1.5
COPS7A-204ENST00000534947 ABCC11Q96J66 1382 aa24.44■■□□□ 1.5
COPS7A-204ENST00000534947 ANKRD26Q9UPS8 1709 aa24.43■■□□□ 1.5
COPS7A-204ENST00000534947 MED14O60244 1454 aa24.43■■□□□ 1.5
COPS7A-204ENST00000534947 PDE3AQ14432 1141 aa24.43■■□□□ 1.5
COPS7A-204ENST00000534947 ZBTB47Q9UFB7 747 aaPredicted RBP24.43■■□□□ 1.5
COPS7A-204ENST00000534947 DIP2BQ9P265 1576 aa24.42■■□□□ 1.5
COPS7A-204ENST00000534947 WDR63Q8IWG1 891 aa24.42■■□□□ 1.5
COPS7A-204ENST00000534947 MTHFSP49914 203 aa24.41■■□□□ 1.5
COPS7A-204ENST00000534947 ADGRB2O60241 1585 aa24.4■■□□□ 1.5
COPS7A-204ENST00000534947 YTHDC2Q9H6S0 1430 aaKnown RBP24.39■■□□□ 1.5
COPS7A-204ENST00000534947 PAK3O75914 559 aaPredicted RBP24.39■■□□□ 1.49
COPS7A-204ENST00000534947 NUTM2DQ5VT03 806 aaPredicted RBP24.38■■□□□ 1.49
COPS7A-204ENST00000534947 DMRT2Q9Y5R5 561 aa24.38■■□□□ 1.49
COPS7A-204ENST00000534947 ALKQ9UM73 1620 aa24.37■■□□□ 1.49
COPS7A-204ENST00000534947 AAMPQ13685 434 aa24.37■■□□□ 1.49
COPS7A-204ENST00000534947 TCP11L2Q8N4U5 519 aa24.37■■□□□ 1.49
COPS7A-204ENST00000534947 A0A1W2PP64 1363 aa24.37■■□□□ 1.49
COPS7A-204ENST00000534947 CABP2Q9NPB3 220 aa24.36■■□□□ 1.49
COPS7A-204ENST00000534947 DLC1Q96QB1 1528 aa24.35■■□□□ 1.49
COPS7A-204ENST00000534947 BCAR3O75815 825 aa24.35■■□□□ 1.49
COPS7A-204ENST00000534947 TNNT2P45379 298 aaPredicted RBP24.35■■□□□ 1.49
COPS7A-204ENST00000534947 TERF2IPQ9NYB0 399 aa24.34■■□□□ 1.49
COPS7A-204ENST00000534947 SPATA31D1Q6ZQQ2 1576 aa24.33■■□□□ 1.49
COPS7A-204ENST00000534947 RIMBP3CA6NJZ7 1639 aa24.32■■□□□ 1.48
COPS7A-204ENST00000534947 RIMBP3BA6NNM3 1639 aa24.32■■□□□ 1.48
COPS7A-204ENST00000534947 RIMBP3Q9UFD9 1639 aa24.32■■□□□ 1.48
COPS7A-204ENST00000534947 SRPK2P78362 688 aaKnown RBP24.31■■□□□ 1.48
COPS7A-204ENST00000534947 COL3A1P02461 1466 aaPredicted RBP24.31■■□□□ 1.48
COPS7A-204ENST00000534947 CD163L1Q9NR16 1453 aa24.31■■□□□ 1.48
COPS7A-204ENST00000534947 ARHGEF40Q8TER5 1519 aa24.3■■□□□ 1.48
COPS7A-204ENST00000534947 NLRP1Q9C000 1473 aa24.3■■□□□ 1.48
COPS7A-204ENST00000534947 CYB5RLQ6IPT4 315 aa24.29■■□□□ 1.48
COPS7A-204ENST00000534947 DDRGK1Q96HY6 314 aa24.29■■□□□ 1.48
COPS7A-204ENST00000534947 MYH16Q9H6N6 1097 aa24.28■■□□□ 1.48
COPS7A-204ENST00000534947 STK26Q9P289 416 aa24.28■■□□□ 1.48
COPS7A-204ENST00000534947 FAM69CQ0P6D2 419 aa24.28■■□□□ 1.48
COPS7A-204ENST00000534947 PRAM1Q96QH2 718 aa24.28■■□□□ 1.48
COPS7A-204ENST00000534947 POGKQ9P215 609 aa24.28■■□□□ 1.48
COPS7A-204ENST00000534947 KIF20BQ96Q89 1820 aa24.28■■□□□ 1.48
COPS7A-204ENST00000534947 CT47B1P0C2W7 299 aaPredicted RBP24.27■■□□□ 1.48
COPS7A-204ENST00000534947 SETD1AO15047 1707 aaKnown RBP24.27■■□□□ 1.48
COPS7A-204ENST00000534947 RARSP54136 660 aaKnown RBP24.27■■□□□ 1.48
COPS7A-204ENST00000534947 FAM161AQ3B820 660 aa24.27■■□□□ 1.48
COPS7A-204ENST00000534947 A2ML1A8K2U0 1454 aa24.26■■□□□ 1.47
COPS7A-204ENST00000534947 FBXO31Q5XUX0 539 aaPredicted RBP24.26■■□□□ 1.47
COPS7A-204ENST00000534947 SAFB2Q14151 953 aaKnown RBP eCLIP24.25■■□□□ 1.47
COPS7A-204ENST00000534947 NPM2Q86SE8 214 aaKnown RBP24.25■■□□□ 1.47
COPS7A-204ENST00000534947 U2AF1L5P0DN76 240 aaPredicted RBP24.25■■□□□ 1.47
COPS7A-204ENST00000534947 U2AF1Q01081 240 aaKnown RBP eCLIP24.25■■□□□ 1.47
COPS7A-204ENST00000534947 CLUAP1Q96AJ1 413 aa24.25■■□□□ 1.47
COPS7A-204ENST00000534947 CANXP27824 592 aaKnown RBP24.24■■□□□ 1.47
COPS7A-204ENST00000534947 HDGFL2Q7Z4V5 671 aaPredicted RBP24.24■■□□□ 1.47
COPS7A-204ENST00000534947 RRP7AQ9Y3A4 280 aaKnown RBP24.23■■□□□ 1.47
COPS7A-204ENST00000534947 TSPOAP1O95153 1857 aa24.23■■□□□ 1.47
COPS7A-204ENST00000534947 ATP7BP35670 1465 aa24.23■■□□□ 1.47
COPS7A-204ENST00000534947 MINK1Q8N4C8 1332 aaPredicted RBP24.23■■□□□ 1.47
COPS7A-204ENST00000534947 NEUROD2Q15784 382 aa24.23■■□□□ 1.47
COPS7A-204ENST00000534947 VIRMAQ69YN4 1812 aaKnown RBP24.22■■□□□ 1.47
COPS7A-204ENST00000534947 FYB1O15117 783 aa24.22■■□□□ 1.47
COPS7A-204ENST00000534947 STAG3Q9UJ98 1225 aa24.22■■□□□ 1.47
COPS7A-204ENST00000534947 CDC42BPGQ6DT37 1551 aa24.22■■□□□ 1.47
COPS7A-204ENST00000534947 PNPLA6Q8IY17 1366 aa24.22■■□□□ 1.47
COPS7A-204ENST00000534947 SKAP1Q86WV1 359 aa24.2■■□□□ 1.47
COPS7A-204ENST00000534947 PLEKHF1Q96S99 279 aa24.2■■□□□ 1.47
COPS7A-204ENST00000534947 PNNQ9H307 717 aaKnown RBP24.2■■□□□ 1.47
COPS7A-204ENST00000534947 RIMS2Q9UQ26 1411 aa24.2■■□□□ 1.46
COPS7A-204ENST00000534947 C8orf34Q49A92 452 aa24.2■■□□□ 1.46
COPS7A-204ENST00000534947 CDK19Q9BWU1 502 aa24.2■■□□□ 1.46
COPS7A-204ENST00000534947 IL16Q14005 1332 aa24.19■■□□□ 1.46
COPS7A-204ENST00000534947 GGNBP2Q9H3C7 697 aa24.18■■□□□ 1.46
COPS7A-204ENST00000534947 ZMYM3Q14202 1370 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms