RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 RPIAP49247 311 aa9.14□□□□□ -0.95
ITGB1-219ENST00000534049 RSPH6AQ9H0K4 717 aa9.14□□□□□ -0.95
ITGB1-219ENST00000534049 MOXD2PA6NHM9 499 aa9.13□□□□□ -0.95
ITGB1-219ENST00000534049 C6orf229H3BNL8 230 aa9.13□□□□□ -0.95
ITGB1-219ENST00000534049 PPEF1O14829 653 aaPredicted RBP9.13□□□□□ -0.95
ITGB1-219ENST00000534049 DXOO77932 396 aaKnown RBP9.13□□□□□ -0.95
ITGB1-219ENST00000534049 HLA-CQ95604 372 aa9.13□□□□□ -0.95
ITGB1-219ENST00000534049 FCF1Q9Y324 198 aaKnown RBP9.13□□□□□ -0.95
ITGB1-219ENST00000534049 GUCA2AQ02747 115 aa9.12□□□□□ -0.95
ITGB1-219ENST00000534049 SPRYD7Q5W111 196 aa9.12□□□□□ -0.95
ITGB1-219ENST00000534049 RSBN1LQ6PCB5 846 aaPredicted RBP9.12□□□□□ -0.95
ITGB1-219ENST00000534049 SPTLC1O15269 473 aa9.11□□□□□ -0.95
ITGB1-219ENST00000534049 ZBTB24O43167 697 aaPredicted RBP9.11□□□□□ -0.95
ITGB1-219ENST00000534049 JUNDP17535 347 aa9.11□□□□□ -0.95
ITGB1-219ENST00000534049 MTMR2Q13614 643 aa9.11□□□□□ -0.95
ITGB1-219ENST00000534049 ZNF598Q86UK7 904 aaKnown RBP9.11□□□□□ -0.95
ITGB1-219ENST00000534049 DDRGK1Q96HY6 314 aa9.11□□□□□ -0.95
ITGB1-219ENST00000534049 PRDM9Q9NQV7 894 aa9.11□□□□□ -0.95
ITGB1-219ENST00000534049 CD2BP2O95400 341 aaKnown RBP9.1□□□□□ -0.95
ITGB1-219ENST00000534049 TUSC1Q2TAM9 212 aa9.1□□□□□ -0.95
ITGB1-219ENST00000534049 PRPF38BQ5VTL8 546 aaKnown RBP9.1□□□□□ -0.95
ITGB1-219ENST00000534049 PCDHGC3Q9UN70 934 aa9.1□□□□□ -0.95
ITGB1-219ENST00000534049 NDUFV2P19404 249 aa9.09□□□□□ -0.95
ITGB1-219ENST00000534049 DESI1Q6ICB0 168 aa9.09□□□□□ -0.95
ITGB1-219ENST00000534049 LIAT1Q6ZQX7 453 aa9.09□□□□□ -0.95
ITGB1-219ENST00000534049 ZBTB3Q9H5J0 574 aa9.09□□□□□ -0.95
ITGB1-219ENST00000534049 NRG2O14511 850 aaPredicted RBP9.08□□□□□ -0.96
ITGB1-219ENST00000534049 RIC3Q7Z5B4 369 aa9.08□□□□□ -0.96
ITGB1-219ENST00000534049 KDM4CQ9H3R0 1056 aa9.08□□□□□ -0.96
ITGB1-219ENST00000534049 PLA2G2CQ5R387 149 aa9.07□□□□□ -0.96
ITGB1-219ENST00000534049 ZNF697Q5TEC3 545 aa9.07□□□□□ -0.96
ITGB1-219ENST00000534049 MYSM1Q5VVJ2 828 aa9.07□□□□□ -0.96
ITGB1-219ENST00000534049 PDZRN3Q9UPQ7 1066 aa9.07□□□□□ -0.96
ITGB1-219ENST00000534049 GFRA3O60609 400 aa9.06□□□□□ -0.96
ITGB1-219ENST00000534049 PRR20EP86478 221 aa9.06□□□□□ -0.96
ITGB1-219ENST00000534049 PRR20CP86479 221 aa9.06□□□□□ -0.96
ITGB1-219ENST00000534049 PRR20DP86480 221 aa9.06□□□□□ -0.96
ITGB1-219ENST00000534049 PRR20BP86481 221 aa9.06□□□□□ -0.96
ITGB1-219ENST00000534049 PRR20AP86496 221 aa9.06□□□□□ -0.96
ITGB1-219ENST00000534049 SYMPKQ92797 1274 aaKnown RBP9.06□□□□□ -0.96
ITGB1-219ENST00000534049 EMID1Q96A84 441 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-219ENST00000534049 PTPRNQ16849 979 aa9.05□□□□□ -0.96
ITGB1-219ENST00000534049 PRR7Q8TB68 274 aa9.05□□□□□ -0.96
ITGB1-219ENST00000534049 NUDT12Q9BQG2 462 aa9.04□□□□□ -0.96
ITGB1-219ENST00000534049 CLK2P49760 499 aaKnown RBP9.03□□□□□ -0.96
ITGB1-219ENST00000534049 CCDC24Q8N4L8 307 aa9.03□□□□□ -0.96
ITGB1-219ENST00000534049 GPBP1L1Q9HC44 474 aaPredicted RBP9.03□□□□□ -0.96
ITGB1-219ENST00000534049 CCNYL3P0C7X3 344 aa9.02□□□□□ -0.97
ITGB1-219ENST00000534049 HRCP23327 699 aa9.02□□□□□ -0.97
ITGB1-219ENST00000534049 TRIM32Q13049 653 aa9.02□□□□□ -0.97
ITGB1-219ENST00000534049 SH3D19Q5HYK7 790 aa9.02□□□□□ -0.97
ITGB1-219ENST00000534049 Q6ZNB5 142 aa9.02□□□□□ -0.97
ITGB1-219ENST00000534049 TPRNQ4KMQ1 711 aa9.01□□□□□ -0.97
ITGB1-219ENST00000534049 PCDHB15Q9Y5E8 787 aa9.01□□□□□ -0.97
ITGB1-219ENST00000534049 NUTM2BA6NNL0 878 aaPredicted RBP9□□□□□ -0.97
ITGB1-219ENST00000534049 NUTM2EB1AL46 878 aaPredicted RBP9□□□□□ -0.97
ITGB1-219ENST00000534049 WNT7BP56706 349 aa9□□□□□ -0.97
ITGB1-219ENST00000534049 SKIV2LQ15477 1246 aaKnown RBP9□□□□□ -0.97
ITGB1-219ENST00000534049 NUTM2DQ5VT03 806 aaPredicted RBP9□□□□□ -0.97
ITGB1-219ENST00000534049 NUTM2AQ8IVF1 878 aaPredicted RBP9□□□□□ -0.97
ITGB1-219ENST00000534049 LIMD1Q9UGP4 676 aa9□□□□□ -0.97
ITGB1-219ENST00000534049 GDF9O60383 454 aa8.99□□□□□ -0.97
ITGB1-219ENST00000534049 NEUROD2Q15784 382 aa8.99□□□□□ -0.97
ITGB1-219ENST00000534049 HELBQ8NG08 1087 aaPredicted RBP8.99□□□□□ -0.97
ITGB1-219ENST00000534049 LILRB3O75022 631 aa8.98□□□□□ -0.97
ITGB1-219ENST00000534049 CSPP1Q1MSJ5 1256 aa8.98□□□□□ -0.97
ITGB1-219ENST00000534049 TRIM67Q6ZTA4 783 aa8.98□□□□□ -0.97
ITGB1-219ENST00000534049 FAM117AQ9C073 453 aa8.98□□□□□ -0.97
ITGB1-219ENST00000534049 EVA1BQ9NVM1 165 aa8.98□□□□□ -0.97
ITGB1-219ENST00000534049 WNT7AO00755 349 aa8.97□□□□□ -0.97
ITGB1-219ENST00000534049 LYPD8Q6UX82 237 aa8.97□□□□□ -0.97
ITGB1-219ENST00000534049 GOPCQ9HD26 462 aa8.97□□□□□ -0.97
ITGB1-219ENST00000534049 CFAP99D6REC4 459 aa8.96□□□□□ -0.98
ITGB1-219ENST00000534049 DGAT1O75907 488 aa8.96□□□□□ -0.98
ITGB1-219ENST00000534049 KCNH2Q12809 1159 aa8.96□□□□□ -0.98
ITGB1-219ENST00000534049 CABLES1Q8TDN4 633 aa8.96□□□□□ -0.98
ITGB1-219ENST00000534049 POLR3EQ9NVU0 708 aa8.96□□□□□ -0.98
ITGB1-219ENST00000534049 PKD2L1Q9P0L9 805 aa8.96□□□□□ -0.98
ITGB1-219ENST00000534049 FOXC1Q12948 553 aa8.95□□□□□ -0.98
ITGB1-219ENST00000534049 QPCTQ16769 361 aa8.95□□□□□ -0.98
ITGB1-219ENST00000534049 PKDCCQ504Y2 493 aa8.95□□□□□ -0.98
ITGB1-219ENST00000534049 TNFRSF10AO00220 468 aa8.94□□□□□ -0.98
ITGB1-219ENST00000534049 CYP4X1Q8N118 509 aa8.94□□□□□ -0.98
ITGB1-219ENST00000534049 PLEKHG3A1L390 1219 aa8.93□□□□□ -0.98
ITGB1-219ENST00000534049 UNC93B1Q9H1C4 597 aa8.93□□□□□ -0.98
ITGB1-219ENST00000534049 ATP1B4Q9UN42 357 aaPredicted RBP8.93□□□□□ -0.98
ITGB1-219ENST00000534049 CTHP32929 405 aa8.92□□□□□ -0.98
ITGB1-219ENST00000534049 TRAF7Q6Q0C0 670 aa8.92□□□□□ -0.98
ITGB1-219ENST00000534049 TSC1Q92574 1164 aa8.92□□□□□ -0.98
ITGB1-219ENST00000534049 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.92□□□□□ -0.98
ITGB1-219ENST00000534049 BRPF1P55201 1214 aaPredicted RBP8.91□□□□□ -0.98
ITGB1-219ENST00000534049 PPP2R2DQ66LE6 453 aa8.91□□□□□ -0.98
ITGB1-219ENST00000534049 ARMC2Q8NEN0 867 aa8.91□□□□□ -0.98
ITGB1-219ENST00000534049 SNIP1Q8TAD8 396 aaKnown RBP8.91□□□□□ -0.98
ITGB1-219ENST00000534049 TOR4AQ9NXH8 423 aa8.91□□□□□ -0.98
ITGB1-219ENST00000534049 TTC24A2A3L6 582 aaPredicted RBP8.9□□□□□ -0.98
ITGB1-219ENST00000534049 FAM187AA6NFU0 413 aa8.9□□□□□ -0.98
ITGB1-219ENST00000534049 F12P00748 615 aaPredicted RBP8.9□□□□□ -0.98
ITGB1-219ENST00000534049 RC3H1Q5TC82 1133 aaKnown RBP8.9□□□□□ -0.98
ITGB1-219ENST00000534049 PTCRAQ6ISU1 281 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms