RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, human

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1-208	ENST00000533361	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.06	■■■□□ 2.72
SIPA1-208	ENST00000533361	PRAM1	Q96QH2	718 aa		32.06	■■■□□ 2.72
SIPA1-208	ENST00000533361	MST1R	Q04912	1400 aa		32.06	■■■□□ 2.72
SIPA1-208	ENST00000533361	ADGRB1	O14514	1584 aa		32.05	■■■□□ 2.72
SIPA1-208	ENST00000533361	PHF23	Q9BUL5	403 aa	Predicted RBP	32.04	■■■□□ 2.72
SIPA1-208	ENST00000533361	BRINP3	Q76B58	766 aa		32.03	■■■□□ 2.72
SIPA1-208	ENST00000533361	DLC1	Q96QB1	1528 aa		31.98	■■■□□ 2.71
SIPA1-208	ENST00000533361	PHLPP1	O60346	1717 aa		31.97	■■■□□ 2.71
SIPA1-208	ENST00000533361	C1orf167	Q5SNV9	1468 aa		31.97	■■■□□ 2.71
SIPA1-208	ENST00000533361	TONSL	Q96HA7	1378 aa		31.97	■■■□□ 2.71
SIPA1-208	ENST00000533361	NUTM2F	A1L443	756 aa		31.97	■■■□□ 2.71
SIPA1-208	ENST00000533361	NBPF1	Q3BBV0	1214 aa		31.97	■■■□□ 2.71
SIPA1-208	ENST00000533361	CDC42BPG	Q6DT37	1551 aa		31.95	■■■□□ 2.71
SIPA1-208	ENST00000533361	KIAA1210	Q9ULL0	1709 aa		31.95	■■■□□ 2.7
SIPA1-208	ENST00000533361	ORAI2	Q96SN7	254 aa		31.94	■■■□□ 2.7
SIPA1-208	ENST00000533361	ESCO1	Q5FWF5	840 aa		31.92	■■■□□ 2.7
SIPA1-208	ENST00000533361	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.91	■■■□□ 2.7
SIPA1-208	ENST00000533361	DDX17	Q92841	729 aa	Known RBP	31.89	■■■□□ 2.7
SIPA1-208	ENST00000533361	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.89	■■■□□ 2.7
SIPA1-208	ENST00000533361	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.88	■■■□□ 2.69
SIPA1-208	ENST00000533361	COL16A1	Q07092	1604 aa	Predicted RBP	31.84	■■■□□ 2.69
SIPA1-208	ENST00000533361	JCAD	Q9P266	1359 aa		31.83	■■■□□ 2.69
SIPA1-208	ENST00000533361	NBPF8	Q3BBV2	869 aa		31.83	■■■□□ 2.69
SIPA1-208	ENST00000533361	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.83	■■■□□ 2.69
SIPA1-208	ENST00000533361	FMN2	Q9NZ56	1722 aa		31.83	■■■□□ 2.69
SIPA1-208	ENST00000533361	ROCK2	O75116	1388 aa	Known RBP	31.81	■■■□□ 2.68
SIPA1-208	ENST00000533361	NHSL1	Q5SYE7	1610 aa		31.8	■■■□□ 2.68
SIPA1-208	ENST00000533361	TRPM1	Q7Z4N2	1603 aa		31.79	■■■□□ 2.68
SIPA1-208	ENST00000533361	CCER1	Q8TC90	406 aa	Predicted RBP	31.79	■■■□□ 2.68
SIPA1-208	ENST00000533361	LRRC59	Q96AG4	307 aa	Known RBP	31.79	■■■□□ 2.68
SIPA1-208	ENST00000533361	RGS17	Q9UGC6	210 aa	Predicted RBP	31.79	■■■□□ 2.68
SIPA1-208	ENST00000533361	WASL	O00401	505 aa	Predicted RBP	31.77	■■■□□ 2.68
SIPA1-208	ENST00000533361	FOXO3	O43524	673 aa		31.77	■■■□□ 2.68
SIPA1-208	ENST00000533361	NPHP3	Q7Z494	1330 aa		31.75	■■■□□ 2.67
SIPA1-208	ENST00000533361	ADGRB2	O60241	1585 aa		31.75	■■■□□ 2.67
SIPA1-208	ENST00000533361	CLSPN	Q9HAW4	1339 aa		31.75	■■■□□ 2.67
SIPA1-208	ENST00000533361	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.75	■■■□□ 2.67
SIPA1-208	ENST00000533361	EIF3A	Q14152	1382 aa	Known RBP	31.73	■■■□□ 2.67
SIPA1-208	ENST00000533361	PHF8	Q9UPP1	1060 aa		31.73	■■■□□ 2.67
SIPA1-208	ENST00000533361	XPC	Q01831	940 aa	Predicted RBP	31.72	■■■□□ 2.67
SIPA1-208	ENST00000533361	SOS2	Q07890	1332 aa	Predicted RBP	31.71	■■■□□ 2.67
SIPA1-208	ENST00000533361	RGPD8	O14715	1765 aa	Predicted RBP	31.71	■■■□□ 2.67
SIPA1-208	ENST00000533361	ANKAR	Q7Z5J8	1434 aa		31.69	■■■□□ 2.66
SIPA1-208	ENST00000533361	CDK19	Q9BWU1	502 aa		31.69	■■■□□ 2.66
SIPA1-208	ENST00000533361	CARD11	Q9BXL7	1154 aa		31.69	■■■□□ 2.66
SIPA1-208	ENST00000533361	SPATA31A6	Q5VVP1	1343 aa		31.69	■■■□□ 2.66
SIPA1-208	ENST00000533361	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.68	■■■□□ 2.66
SIPA1-208	ENST00000533361	NUTM2E	B1AL46	878 aa	Predicted RBP	31.68	■■■□□ 2.66
SIPA1-208	ENST00000533361	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.68	■■■□□ 2.66
SIPA1-208	ENST00000533361	PMFBP1	Q8TBY8	1022 aa		31.68	■■■□□ 2.66
SIPA1-208	ENST00000533361	KIF1A	Q12756	1690 aa		31.66	■■■□□ 2.66
SIPA1-208	ENST00000533361	SHPRH	Q149N8	1683 aa		31.66	■■■□□ 2.66
SIPA1-208	ENST00000533361	TULP4	Q9NRJ4	1543 aa		31.65	■■■□□ 2.66
SIPA1-208	ENST00000533361	MEX3C	Q5U5Q3	659 aa	Known RBP	31.65	■■■□□ 2.66
SIPA1-208	ENST00000533361	KRT28	Q7Z3Y7	464 aa		31.65	■■■□□ 2.66
SIPA1-208	ENST00000533361	PRR36	Q9H6K5	1346 aa		31.65	■■■□□ 2.66
SIPA1-208	ENST00000533361	NUDT16	Q96DE0	195 aa	Known RBP	31.64	■■■□□ 2.66
SIPA1-208	ENST00000533361	USP32	Q8NFA0	1604 aa		31.64	■■■□□ 2.65
SIPA1-208	ENST00000533361	PSME1	Q06323	249 aa		31.63	■■■□□ 2.65
SIPA1-208	ENST00000533361	GPRASP1	Q5JY77	1395 aa		31.63	■■■□□ 2.65
SIPA1-208	ENST00000533361	SRPK2	P78362	688 aa	Known RBP	31.62	■■■□□ 2.65
SIPA1-208	ENST00000533361	RALGAPB	Q86X10	1494 aa		31.62	■■■□□ 2.65
SIPA1-208	ENST00000533361	PNPLA6	Q8IY17	1366 aa		31.62	■■■□□ 2.65
SIPA1-208	ENST00000533361	TIMELESS	Q9UNS1	1208 aa		31.62	■■■□□ 2.65
SIPA1-208	ENST00000533361	PXDN	Q92626	1479 aa		31.61	■■■□□ 2.65
SIPA1-208	ENST00000533361	QRICH2	Q9H0J4	1663 aa		31.6	■■■□□ 2.65
SIPA1-208	ENST00000533361	POTEA	Q6S8J7	498 aa		31.58	■■■□□ 2.65
SIPA1-208	ENST00000533361	NGDN	Q8NEJ9	315 aa	Known RBP	31.58	■■■□□ 2.65
SIPA1-208	ENST00000533361	CABP2	Q9NPB3	220 aa		31.56	■■■□□ 2.64
SIPA1-208	ENST00000533361	LRP6	O75581	1613 aa		31.55	■■■□□ 2.64
SIPA1-208	ENST00000533361	EVC2	Q86UK5	1308 aa		31.54	■■■□□ 2.64
SIPA1-208	ENST00000533361	CCDC61	Q9Y6R9	512 aa		31.54	■■■□□ 2.64
SIPA1-208	ENST00000533361	ATP7B	P35670	1465 aa		31.53	■■■□□ 2.64
SIPA1-208	ENST00000533361	LMOD2	Q6P5Q4	547 aa		31.53	■■■□□ 2.64
SIPA1-208	ENST00000533361	SPATA31A3	Q5VYP0	1347 aa		31.52	■■■□□ 2.64
SIPA1-208	ENST00000533361	ITSN1	Q15811	1721 aa		31.5	■■■□□ 2.63
SIPA1-208	ENST00000533361	ADAMTS2	O95450	1211 aa		31.49	■■■□□ 2.63
SIPA1-208	ENST00000533361	PLEKHG5	O94827	1062 aa		31.48	■■■□□ 2.63
SIPA1-208	ENST00000533361	SBNO1	A3KN83	1393 aa		31.46	■■■□□ 2.63
SIPA1-208	ENST00000533361	PAK3	O75914	559 aa	Predicted RBP	31.46	■■■□□ 2.63
SIPA1-208	ENST00000533361	TNS3	Q68CZ2	1445 aa		31.45	■■■□□ 2.63
SIPA1-208	ENST00000533361	ACE	P12821	1306 aa		31.45	■■■□□ 2.62
SIPA1-208	ENST00000533361	PLEKHG3	A1L390	1219 aa		31.44	■■■□□ 2.62
SIPA1-208	ENST00000533361	C8orf37	Q96NL8	207 aa		31.44	■■■□□ 2.62
SIPA1-208	ENST00000533361	PPIP5K1	Q6PFW1	1433 aa		31.43	■■■□□ 2.62
SIPA1-208	ENST00000533361	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.42	■■■□□ 2.62
SIPA1-208	ENST00000533361	HAP1	P54257	671 aa	Predicted RBP	31.42	■■■□□ 2.62
SIPA1-208	ENST00000533361	CABP1	Q9NZU7	370 aa		31.41	■■■□□ 2.62
SIPA1-208	ENST00000533361	TOPAZ1	Q8N9V7	1692 aa		31.41	■■■□□ 2.62
SIPA1-208	ENST00000533361	ST20-MTHFS	A0A0A6YYL1	179 aa		31.4	■■■□□ 2.62
SIPA1-208	ENST00000533361	NGLY1	Q96IV0	654 aa		31.4	■■■□□ 2.62
SIPA1-208	ENST00000533361	ARHGEF10	O15013	1369 aa		31.4	■■■□□ 2.62
SIPA1-208	ENST00000533361	SBNO2	Q9Y2G9	1366 aa		31.39	■■■□□ 2.62
SIPA1-208	ENST00000533361	ZNF772	Q68DY9	489 aa	Predicted RBP	31.38	■■■□□ 2.61
SIPA1-208	ENST00000533361	CABLES1	Q8TDN4	633 aa		31.37	■■■□□ 2.61
SIPA1-208	ENST00000533361	AFF2	P51816	1311 aa		31.37	■■■□□ 2.61
SIPA1-208	ENST00000533361	POLR3A	O14802	1390 aa	Predicted RBP	31.37	■■■□□ 2.61
SIPA1-208	ENST00000533361	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.35	■■■□□ 2.61
SIPA1-208	ENST00000533361	USP47	Q96K76	1375 aa		31.34	■■■□□ 2.61
SIPA1-208	ENST00000533361	ATAD2	Q6PL18	1390 aa		31.32	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms