RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 DYDC1Q8WWB3 177 aa8.5□□□□□ -1.05
TGFBR3-210ENST00000533089 TOMM22Q9NS69 142 aa8.49□□□□□ -1.05
TGFBR3-210ENST00000533089 AMPHP49418 695 aa8.49□□□□□ -1.05
TGFBR3-210ENST00000533089 MFAP1P55081 439 aaKnown RBP8.49□□□□□ -1.05
TGFBR3-210ENST00000533089 CCDC191Q8NCU4 936 aa8.49□□□□□ -1.05
TGFBR3-210ENST00000533089 SLC4A10Q6U841 1118 aa8.49□□□□□ -1.05
TGFBR3-210ENST00000533089 GPATCH3Q96I76 525 aa8.49□□□□□ -1.05
TGFBR3-210ENST00000533089 ROCK2O75116 1388 aaKnown RBP8.49□□□□□ -1.05
TGFBR3-210ENST00000533089 SKIDA1Q1XH10 827 aa8.49□□□□□ -1.05
TGFBR3-210ENST00000533089 KTN1Q86UP2 1357 aaKnown RBP8.49□□□□□ -1.05
TGFBR3-210ENST00000533089 RRP12Q5JTH9 1297 aaKnown RBP8.48□□□□□ -1.05
TGFBR3-210ENST00000533089 PDCL2Q8N4E4 241 aa8.48□□□□□ -1.05
TGFBR3-210ENST00000533089 C9orf84Q5VXU9 1444 aa8.48□□□□□ -1.05
TGFBR3-210ENST00000533089 TRIM6-TRIM34B2RNG4 842 aa8.48□□□□□ -1.05
TGFBR3-210ENST00000533089 CCDC173Q0VFZ6 552 aa8.48□□□□□ -1.05
TGFBR3-210ENST00000533089 TIAM1Q13009 1591 aa8.48□□□□□ -1.05
TGFBR3-210ENST00000533089 AK7Q96M32 723 aa8.48□□□□□ -1.05
TGFBR3-210ENST00000533089 CDK13Q14004 1512 aaKnown RBP8.48□□□□□ -1.05
TGFBR3-210ENST00000533089 RAD21O60216 631 aa8.48□□□□□ -1.05
TGFBR3-210ENST00000533089 EVA1CP58658 441 aa8.48□□□□□ -1.05
TGFBR3-210ENST00000533089 TRIM34Q9BYJ4 488 aa8.48□□□□□ -1.05
TGFBR3-210ENST00000533089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.48□□□□□ -1.052e-8■■□□□ 11.6
TGFBR3-210ENST00000533089 TTLL5Q6EMB2 1281 aa8.47□□□□□ -1.05
TGFBR3-210ENST00000533089 PAIP2Q9BPZ3 127 aaKnown RBP8.47□□□□□ -1.05
TGFBR3-210ENST00000533089 MARCH6O60337 910 aa8.47□□□□□ -1.05
TGFBR3-210ENST00000533089 RAPGEF3O95398 923 aa8.47□□□□□ -1.05
TGFBR3-210ENST00000533089 TEX14Q8IWB6 1497 aa8.47□□□□□ -1.05
TGFBR3-210ENST00000533089 PSMD1Q99460 953 aa8.47□□□□□ -1.05
TGFBR3-210ENST00000533089 IBSPP21815 317 aaPredicted RBP8.47□□□□□ -1.05
TGFBR3-210ENST00000533089 WDR70Q9NW82 654 aa8.47□□□□□ -1.05
TGFBR3-210ENST00000533089 SAMD1Q6SPF0 538 aaPredicted RBP8.46□□□□□ -1.05
TGFBR3-210ENST00000533089 BANK1Q8NDB2 785 aa8.46□□□□□ -1.05
TGFBR3-210ENST00000533089 HSPA5P11021 654 aaKnown RBP8.46□□□□□ -1.05
TGFBR3-210ENST00000533089 ADGRL1O94910 1474 aa8.46□□□□□ -1.06
TGFBR3-210ENST00000533089 CT47A1Q5JQC4 288 aaPredicted RBP8.46□□□□□ -1.06
TGFBR3-210ENST00000533089 PPP4R3BQ5MIZ7 849 aa8.46□□□□□ -1.06
TGFBR3-210ENST00000533089 IFT57Q9NWB7 429 aa8.46□□□□□ -1.06
TGFBR3-210ENST00000533089 UGGT2Q9NYU1 1516 aa8.46□□□□□ -1.06
TGFBR3-210ENST00000533089 MPHOSPH10O00566 681 aaKnown RBP8.46□□□□□ -1.06
TGFBR3-210ENST00000533089 HSP90B2PQ58FF3 399 aa8.46□□□□□ -1.06
TGFBR3-210ENST00000533089 MAP3K1Q13233 1512 aa8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 FOXD4L5Q5VV16 416 aaPredicted RBP8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 FOXD4L4Q8WXT5 416 aaPredicted RBP8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 RRBP1Q9P2E9 1410 aaKnown RBP8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 FAM161AQ3B820 660 aa8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 SMAP1Q8IYB5 467 aaPredicted RBP8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 L3MBTL2Q969R5 705 aa8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 TERF2IPQ9NYB0 399 aa8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 SPDYE4A6NLX3 237 aa8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 NOL8Q76FK4 1167 aaKnown RBP8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 TICAM2Q86XR7 235 aa8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 KIF14Q15058 1648 aa8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 DENND4BO75064 1496 aaPredicted RBP8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 CERS3Q8IU89 383 aa8.45□□□□□ -1.06
TGFBR3-210ENST00000533089 CCDC141Q6ZP82 1450 aa8.44□□□□□ -1.06
TGFBR3-210ENST00000533089 ARHGEF11O15085 1522 aa8.44□□□□□ -1.06
TGFBR3-210ENST00000533089 GTPBP4Q9BZE4 634 aaKnown RBP8.44□□□□□ -1.06
TGFBR3-210ENST00000533089 SMC4Q9NTJ3 1288 aa8.44□□□□□ -1.06
TGFBR3-210ENST00000533089 GOLIM4O00461 696 aa8.44□□□□□ -1.06
TGFBR3-210ENST00000533089 SARNPP82979 210 aaKnown RBP8.44□□□□□ -1.06
TGFBR3-210ENST00000533089 CDR1P51861 262 aa8.44□□□□□ -1.06
TGFBR3-210ENST00000533089 ASXL2Q76L83 1435 aa8.44□□□□□ -1.06
TGFBR3-210ENST00000533089 TRAK2O60296 914 aa8.44□□□□□ -1.06
TGFBR3-210ENST00000533089 ARID4AP29374 1257 aaPredicted RBP8.44□□□□□ -1.06
TGFBR3-210ENST00000533089 MNS1Q8NEH6 495 aa8.44□□□□□ -1.06
TGFBR3-210ENST00000533089 ZFP91Q96JP5 570 aaPredicted RBP8.44□□□□□ -1.06
TGFBR3-210ENST00000533089 AKNAQ7Z591 1439 aa8.43□□□□□ -1.06
TGFBR3-210ENST00000533089 TPM4P67936 248 aa8.43□□□□□ -1.06
TGFBR3-210ENST00000533089 GRPEL1Q9HAV7 217 aa8.43□□□□□ -1.06
TGFBR3-210ENST00000533089 ZBTB12Q9Y330 459 aaPredicted RBP8.43□□□□□ -1.06
TGFBR3-210ENST00000533089 RWDD1Q9H446 243 aaPredicted RBP8.43□□□□□ -1.06
TGFBR3-210ENST00000533089 BCCIPQ9P287 314 aaKnown RBP eCLIP8.43□□□□□ -1.06
TGFBR3-210ENST00000533089 CCDC146Q8IYE0 955 aa8.43□□□□□ -1.06
TGFBR3-210ENST00000533089 PCF11O94913 1555 aaKnown RBP8.43□□□□□ -1.06
TGFBR3-210ENST00000533089 KIF16BQ96L93 1317 aa8.43□□□□□ -1.06
TGFBR3-210ENST00000533089 THEMISQ8N1K5 641 aaPredicted RBP8.43□□□□□ -1.06
TGFBR3-210ENST00000533089 ACBD3Q9H3P7 528 aa8.43□□□□□ -1.06
TGFBR3-210ENST00000533089 THOC2Q8NI27 1593 aaKnown RBP8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 FBXW7Q969H0 707 aa8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 RCAN3Q9UKA8 241 aa8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 DAPK1P53355 1430 aa8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 CENPHQ9H3R5 247 aa8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 SLC52A1Q9NWF4 448 aa8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 PPP6R1Q9UPN7 881 aa8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 SUPT6HQ7KZ85 1726 aaKnown RBP8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 HMMRO75330 724 aa8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 HFM1A2PYH4 1435 aa8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 HOMER1Q86YM7 354 aa8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 CCDC34Q96HJ3 373 aa8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 CHMP5Q9NZZ3 219 aa8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 CTDP1Q9Y5B0 961 aaPredicted RBP8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 WDR7Q9Y4E6 1490 aa8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 NGEFQ8N5V2 710 aa8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 SYTL4Q96C24 671 aaPredicted RBP8.42□□□□□ -1.06
TGFBR3-210ENST00000533089 ABCA5Q8WWZ7 1642 aa8.41□□□□□ -1.06
TGFBR3-210ENST00000533089 C1orf141Q5JVX7 400 aa8.41□□□□□ -1.06
TGFBR3-210ENST00000533089 CEP89Q96ST8 783 aa8.41□□□□□ -1.06
TGFBR3-210ENST00000533089 ROCK1Q13464 1354 aa8.41□□□□□ -1.06
TGFBR3-210ENST00000533089 SASS6Q6UVJ0 657 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms