RNA–Protein interactions for RNA: ENST00000532909.5

CHID1-220, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-220ENST00000532909 SETD1AO15047 1707 aaKnown RBP28.16■■■□□ 2.1
CHID1-220ENST00000532909 PRAG1Q86YV5 1406 aa28.15■■■□□ 2.1
CHID1-220ENST00000532909 LRRC59Q96AG4 307 aaKnown RBP28.13■■■□□ 2.09
CHID1-220ENST00000532909 IFT172Q9UG01 1749 aa28.12■■■□□ 2.09
CHID1-220ENST00000532909 NHSL1Q5SYE7 1610 aa28.12■■■□□ 2.09
CHID1-220ENST00000532909 ZNF772Q68DY9 489 aaPredicted RBP28.12■■■□□ 2.09
CHID1-220ENST00000532909 ADGRF5Q8IZF2 1346 aa28.12■■■□□ 2.09
CHID1-220ENST00000532909 C1orf167Q5SNV9 1468 aa28.11■■■□□ 2.09
CHID1-220ENST00000532909 RALGAPBQ86X10 1494 aa28.11■■■□□ 2.09
CHID1-220ENST00000532909 KDM2AQ9Y2K7 1162 aa28.11■■■□□ 2.09
CHID1-220ENST00000532909 NRXN1Q9ULB1 1477 aa28.08■■■□□ 2.09
CHID1-220ENST00000532909 STK26Q9P289 416 aa28.08■■■□□ 2.09
CHID1-220ENST00000532909 ORAI2Q96SN7 254 aa28.07■■■□□ 2.08
CHID1-220ENST00000532909 KIAA1210Q9ULL0 1709 aa28.06■■■□□ 2.08
CHID1-220ENST00000532909 PNPLA6Q8IY17 1366 aa28.04■■■□□ 2.08
CHID1-220ENST00000532909 NBPF8Q3BBV2 869 aa28.03■■■□□ 2.08
CHID1-220ENST00000532909 AFF2P51816 1311 aa28.02■■■□□ 2.08
CHID1-220ENST00000532909 LAMC1P11047 1609 aa28.02■■■□□ 2.08
CHID1-220ENST00000532909 GPRASP1Q5JY77 1395 aa28.01■■■□□ 2.07
CHID1-220ENST00000532909 ROCK2O75116 1388 aaKnown RBP28■■■□□ 2.07
CHID1-220ENST00000532909 TRPM1Q7Z4N2 1603 aa28■■■□□ 2.07
CHID1-220ENST00000532909 TMEM132EQ6IEE7 984 aa28■■■□□ 2.07
CHID1-220ENST00000532909 C8orf37Q96NL8 207 aa28■■■□□ 2.07
CHID1-220ENST00000532909 PIK3C2GO75747 1445 aa28■■■□□ 2.07
CHID1-220ENST00000532909 WAPLQ7Z5K2 1190 aa27.99■■■□□ 2.07
CHID1-220ENST00000532909 RXRBP28702 533 aa27.98■■■□□ 2.07
CHID1-220ENST00000532909 EIF4G2P78344 907 aaKnown RBP eCLIP27.98■■■□□ 2.07
CHID1-220ENST00000532909 LRPPRCP42704 1394 aaKnown RBP27.98■■■□□ 2.07
CHID1-220ENST00000532909 ESCO1Q5FWF5 840 aa27.97■■■□□ 2.07
CHID1-220ENST00000532909 ADAMTS2O95450 1211 aa27.96■■■□□ 2.07
CHID1-220ENST00000532909 SOS2Q07890 1332 aaPredicted RBP27.95■■■□□ 2.07
CHID1-220ENST00000532909 NUTM2FA1L443 756 aa27.95■■■□□ 2.06
CHID1-220ENST00000532909 CDC42BPGQ6DT37 1551 aa27.94■■■□□ 2.06
CHID1-220ENST00000532909 CARD11Q9BXL7 1154 aa27.94■■■□□ 2.06
CHID1-220ENST00000532909 TECPR2O15040 1411 aa27.93■■■□□ 2.06
CHID1-220ENST00000532909 ABCC11Q96J66 1382 aa27.93■■■□□ 2.06
CHID1-220ENST00000532909 ZNF316A6NFI3 1004 aaPredicted RBP27.92■■■□□ 2.06
CHID1-220ENST00000532909 SLC24A1O60721 1099 aa27.92■■■□□ 2.06
CHID1-220ENST00000532909 NGLY1Q96IV0 654 aa27.92■■■□□ 2.06
CHID1-220ENST00000532909 C14orf93Q9H972 538 aaKnown RBP27.92■■■□□ 2.06
CHID1-220ENST00000532909 PLEKHH1Q9ULM0 1364 aa27.91■■■□□ 2.06
CHID1-220ENST00000532909 NPHP3Q7Z494 1330 aa27.91■■■□□ 2.06
CHID1-220ENST00000532909 YTHDC2Q9H6S0 1430 aaKnown RBP27.9■■■□□ 2.06
CHID1-220ENST00000532909 EIF3AQ14152 1382 aaKnown RBP27.89■■■□□ 2.06
CHID1-220ENST00000532909 XPCQ01831 940 aaPredicted RBP27.89■■■□□ 2.06
CHID1-220ENST00000532909 FOXO3O43524 673 aa27.88■■■□□ 2.05
CHID1-220ENST00000532909 QTRT2Q9H974 415 aaKnown RBP27.88■■■□□ 2.05
CHID1-220ENST00000532909 CFAP70Q5T0N1 1121 aa27.86■■■□□ 2.05
CHID1-220ENST00000532909 KNDC1Q76NI1 1749 aa27.86■■■□□ 2.05
CHID1-220ENST00000532909 USP47Q96K76 1375 aa27.86■■■□□ 2.05
CHID1-220ENST00000532909 CDK12Q9NYV4 1490 aaPredicted RBP27.83■■■□□ 2.04
CHID1-220ENST00000532909 RBM6P78332 1123 aaKnown RBP27.82■■■□□ 2.04
CHID1-220ENST00000532909 UPF1Q92900 1129 aaKnown RBP eCLIP27.82■■■□□ 2.042e-15■■■■■ 66.8
CHID1-220ENST00000532909 SAFB2Q14151 953 aaKnown RBP eCLIP27.81■■■□□ 2.04
CHID1-220ENST00000532909 PXDNQ92626 1479 aa27.81■■■□□ 2.04
CHID1-220ENST00000532909 USP21Q9UK80 565 aa27.8■■■□□ 2.04
CHID1-220ENST00000532909 SIRT1Q96EB6 747 aa27.79■■■□□ 2.04
CHID1-220ENST00000532909 NBPF1Q3BBV0 1214 aa27.78■■■□□ 2.04
CHID1-220ENST00000532909 HSPA5P11021 654 aaKnown RBP27.77■■■□□ 2.04
CHID1-220ENST00000532909 PRAM1Q96QH2 718 aa27.77■■■□□ 2.04
CHID1-220ENST00000532909 FMN2Q9NZ56 1722 aa27.77■■■□□ 2.04
CHID1-220ENST00000532909 COL22A1Q8NFW1 1626 aaPredicted RBP27.77■■■□□ 2.04
CHID1-220ENST00000532909 ADGRB1O14514 1584 aa27.77■■■□□ 2.04
CHID1-220ENST00000532909 RGS12O14924 1447 aa27.75■■■□□ 2.03
CHID1-220ENST00000532909 POGKQ9P215 609 aa27.75■■■□□ 2.03
CHID1-220ENST00000532909 TRPC5Q9UL62 973 aaPredicted RBP27.73■■■□□ 2.03
CHID1-220ENST00000532909 KRT28Q7Z3Y7 464 aa27.72■■■□□ 2.03
CHID1-220ENST00000532909 FNBP4Q8N3X1 1017 aaPredicted RBP27.72■■■□□ 2.03
CHID1-220ENST00000532909 PHF8Q9UPP1 1060 aa27.71■■■□□ 2.03
CHID1-220ENST00000532909 KIF1AQ12756 1690 aa27.71■■■□□ 2.03
CHID1-220ENST00000532909 TRAK1Q9UPV9 953 aa27.69■■■□□ 2.02
CHID1-220ENST00000532909 SBNO2Q9Y2G9 1366 aa27.69■■■□□ 2.02
CHID1-220ENST00000532909 SPATA31A3Q5VYP0 1347 aa27.68■■■□□ 2.02
CHID1-220ENST00000532909 PLEKHG5O94827 1062 aa27.67■■■□□ 2.02
CHID1-220ENST00000532909 CDCA8Q53HL2 280 aa27.67■■■□□ 2.02
CHID1-220ENST00000532909 DLC1Q96QB1 1528 aa27.67■■■□□ 2.02
CHID1-220ENST00000532909 ST20-MTHFSA0A0A6YYL1 179 aa27.65■■■□□ 2.02
CHID1-220ENST00000532909 HAP1P54257 671 aaPredicted RBP27.65■■■□□ 2.02
CHID1-220ENST00000532909 PSME1Q06323 249 aa27.65■■■□□ 2.02
CHID1-220ENST00000532909 RGPD8O14715 1765 aaPredicted RBP27.65■■■□□ 2.02
CHID1-220ENST00000532909 ATRNO75882 1429 aa27.65■■■□□ 2.02
CHID1-220ENST00000532909 LMOD2Q6P5Q4 547 aa27.64■■■□□ 2.02
CHID1-220ENST00000532909 HIRIP3Q9BW71 556 aaPredicted RBP27.64■■■□□ 2.02
CHID1-220ENST00000532909 MINK1Q8N4C8 1332 aaPredicted RBP27.63■■■□□ 2.01
CHID1-220ENST00000532909 TMF1P82094 1093 aa27.62■■■□□ 2.01
CHID1-220ENST00000532909 PMFBP1Q8TBY8 1022 aa27.62■■■□□ 2.01
CHID1-220ENST00000532909 CENPJQ9HC77 1338 aaPredicted RBP27.62■■■□□ 2.01
CHID1-220ENST00000532909 BCL9LQ86UU0 1499 aa27.61■■■□□ 2.01
CHID1-220ENST00000532909 MARF1Q9Y4F3 1742 aaKnown RBP27.61■■■□□ 2.01
CHID1-220ENST00000532909 TNS3Q68CZ2 1445 aa27.6■■■□□ 2.01
CHID1-220ENST00000532909 CABLES1Q8TDN4 633 aa27.59■■■□□ 2.01
CHID1-220ENST00000532909 ATAD2Q6PL18 1390 aa27.59■■■□□ 2.01
CHID1-220ENST00000532909 ANKARQ7Z5J8 1434 aa27.58■■■□□ 2.01
CHID1-220ENST00000532909 GJD4Q96KN9 370 aaPredicted RBP27.56■■■□□ 2
CHID1-220ENST00000532909 ADGRB2O60241 1585 aa27.56■■■□□ 2
CHID1-220ENST00000532909 SBNO1A3KN83 1393 aa27.55■■■□□ 2
CHID1-220ENST00000532909 ARHGEF28Q8N1W1 1705 aaKnown RBP27.55■■■□□ 2
CHID1-220ENST00000532909 UNC5CLQ8IV45 518 aa27.54■■■□□ 2
CHID1-220ENST00000532909 PUS7Q96PZ0 661 aaKnown RBP27.54■■■□□ 2
CHID1-220ENST00000532909 TESK2Q96S53 571 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms