RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 SCAPERQ9BY12 1400 aa9.16□□□□□ -0.94
CTNND1-233ENST00000532787 SLC4A3P48751 1232 aa9.16□□□□□ -0.94
CTNND1-233ENST00000532787 TDRD9Q8NDG6 1382 aaKnown RBP9.16□□□□□ -0.94
CTNND1-233ENST00000532787 CCDC7Q96M83 1385 aa9.16□□□□□ -0.94
CTNND1-233ENST00000532787 PDCP20941 246 aa9.15□□□□□ -0.94
CTNND1-233ENST00000532787 RIPK4P57078 832 aa9.15□□□□□ -0.94
CTNND1-233ENST00000532787 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.15□□□□□ -0.94
CTNND1-233ENST00000532787 CTDP1Q9Y5B0 961 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-233ENST00000532787 VPS37CA5D8V6 355 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-233ENST00000532787 CAVIN1Q6NZI2 390 aaKnown RBP9.15□□□□□ -0.94
CTNND1-233ENST00000532787 NFXL1Q6ZNB6 911 aa9.15□□□□□ -0.94
CTNND1-233ENST00000532787 CCDC191Q8NCU4 936 aa9.15□□□□□ -0.94
CTNND1-233ENST00000532787 CADPSQ9ULU8 1353 aa9.15□□□□□ -0.94
CTNND1-233ENST00000532787 NFKBIBQ15653 356 aa9.14□□□□□ -0.95
CTNND1-233ENST00000532787 SMARCE1Q969G3 411 aa9.14□□□□□ -0.95
CTNND1-233ENST00000532787 CCDC9Q9Y3X0 531 aaKnown RBP9.14□□□□□ -0.95
CTNND1-233ENST00000532787 TRHP20396 242 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-233ENST00000532787 BCL2L13Q9BXK5 485 aa9.14□□□□□ -0.95
CTNND1-233ENST00000532787 CNTROBQ8N137 903 aa9.14□□□□□ -0.95
CTNND1-233ENST00000532787 TXLNBQ8N3L3 684 aa9.14□□□□□ -0.95
CTNND1-233ENST00000532787 LTV1Q96GA3 475 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-233ENST00000532787 CWC22Q9HCG8 908 aaKnown RBP9.14□□□□□ -0.95
CTNND1-233ENST00000532787 WASHC2AQ641Q2 1341 aa9.14□□□□□ -0.95
CTNND1-233ENST00000532787 RABEP1Q15276 862 aa9.14□□□□□ -0.95
CTNND1-233ENST00000532787 RALYLQ86SE5 291 aaKnown RBP9.14□□□□□ -0.95
CTNND1-233ENST00000532787 PDIA4P13667 645 aaKnown RBP9.13□□□□□ -0.95
CTNND1-233ENST00000532787 TSPY26PQ9H489 355 aa9.13□□□□□ -0.95
CTNND1-233ENST00000532787 FILIP1LQ4L180 1135 aa9.13□□□□□ -0.95
CTNND1-233ENST00000532787 FKBP5Q13451 457 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-233ENST00000532787 ZNF396Q96N95 335 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-233ENST00000532787 GNAI3P08754 354 aa9.12□□□□□ -0.95
CTNND1-233ENST00000532787 GCC1Q96CN9 775 aa9.12□□□□□ -0.95
CTNND1-233ENST00000532787 ELL2O00472 640 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-233ENST00000532787 CT47B1P0C2W7 299 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-233ENST00000532787 DHX16O60231 1041 aaKnown RBP9.12□□□□□ -0.95
CTNND1-233ENST00000532787 FOXD4L6Q3SYB3 417 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-233ENST00000532787 FOXD4L3Q6VB84 417 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-233ENST00000532787 CCDC43Q96MW1 224 aaKnown RBP9.12□□□□□ -0.95
CTNND1-233ENST00000532787 TRAK2O60296 914 aa9.11□□□□□ -0.95
CTNND1-233ENST00000532787 NAP1L1P55209 391 aaKnown RBP9.11□□□□□ -0.95
CTNND1-233ENST00000532787 CT47A1Q5JQC4 288 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-233ENST00000532787 ERC1Q8IUD2 1116 aa9.11□□□□□ -0.95
CTNND1-233ENST00000532787 ODF2Q5BJF6 829 aa9.11□□□□□ -0.95
CTNND1-233ENST00000532787 AEBP1Q8IUX7 1158 aa9.11□□□□□ -0.95
CTNND1-233ENST00000532787 PDE3AQ14432 1141 aa9.11□□□□□ -0.95
CTNND1-233ENST00000532787 SART3Q15020 963 aaKnown RBP9.11□□□□□ -0.95
CTNND1-233ENST00000532787 VPS37DQ86XT2 251 aa9.11□□□□□ -0.95
CTNND1-233ENST00000532787 STK11IPQ8N1F8 1099 aa9.11□□□□□ -0.95
CTNND1-233ENST00000532787 CAGE1Q8TC20 777 aa9.11□□□□□ -0.95
CTNND1-233ENST00000532787 DACH1Q9UI36 760 aa9.1□□□□□ -0.95
CTNND1-233ENST00000532787 R3HCC1Q9Y3T6 440 aaKnown RBP9.1□□□□□ -0.95
CTNND1-233ENST00000532787 EPS15P42566 896 aa9.1□□□□□ -0.95
CTNND1-233ENST00000532787 LEKR1Q6ZMV7 388 aa9.1□□□□□ -0.95
CTNND1-233ENST00000532787 JPH4Q96JJ6 628 aa9.1□□□□□ -0.95
CTNND1-233ENST00000532787 KINO60870 393 aaKnown RBP9.1□□□□□ -0.95
CTNND1-233ENST00000532787 TSPYL4Q9UJ04 414 aa9.1□□□□□ -0.95
CTNND1-233ENST00000532787 SDF4Q9BRK5 362 aa9.1□□□□□ -0.95
CTNND1-233ENST00000532787 OFD1O75665 1012 aa9.1□□□□□ -0.95
CTNND1-233ENST00000532787 UBTFL1P0CB47 393 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-233ENST00000532787 EIF2S2P20042 333 aaKnown RBP9.1□□□□□ -0.95
CTNND1-233ENST00000532787 JMYQ8N9B5 988 aa9.1□□□□□ -0.95
CTNND1-233ENST00000532787 LUC7LQ9NQ29 371 aaKnown RBP9.1□□□□□ -0.95
CTNND1-233ENST00000532787 H0YHG0 523 aa9.09□□□□□ -0.95
CTNND1-233ENST00000532787 ANKRD1Q15327 319 aa9.09□□□□□ -0.95
CTNND1-233ENST00000532787 FGD6Q6ZV73 1430 aa9.09□□□□□ -0.95
CTNND1-233ENST00000532787 RRBP1Q9P2E9 1410 aaKnown RBP9.09□□□□□ -0.95
CTNND1-233ENST00000532787 WIZO95785 1651 aa9.09□□□□□ -0.95
CTNND1-233ENST00000532787 ERLIN2O94905 339 aa9.09□□□□□ -0.95
CTNND1-233ENST00000532787 EVA1CP58658 441 aa9.09□□□□□ -0.95
CTNND1-233ENST00000532787 FYCO1Q9BQS8 1478 aa9.09□□□□□ -0.95
CTNND1-233ENST00000532787 TXLNAP40222 546 aa9.09□□□□□ -0.95
CTNND1-233ENST00000532787 TRIM5Q9C035 493 aa9.09□□□□□ -0.95
CTNND1-233ENST00000532787 LNPKQ9C0E8 428 aa9.09□□□□□ -0.96
CTNND1-233ENST00000532787 MAGEC2Q9UBF1 373 aaPredicted RBP9.09□□□□□ -0.96
CTNND1-233ENST00000532787 CIZ1Q9ULV3 898 aaPredicted RBP9.09□□□□□ -0.96
CTNND1-233ENST00000532787 ZRSR2Q15696 482 aaKnown RBP9.08□□□□□ -0.96
CTNND1-233ENST00000532787 PTPRGP23470 1445 aa9.08□□□□□ -0.96
CTNND1-233ENST00000532787 CCDC30Q5VVM6 783 aa9.08□□□□□ -0.96
CTNND1-233ENST00000532787 CBFA2T2O43439 604 aa9.07□□□□□ -0.96
CTNND1-233ENST00000532787 ERLIN1O75477 346 aa9.07□□□□□ -0.96
CTNND1-233ENST00000532787 HSP90AB2PQ58FF8 381 aa9.07□□□□□ -0.96
CTNND1-233ENST00000532787 CLASRPQ8N2M8 674 aaKnown RBP9.07□□□□□ -0.96
CTNND1-233ENST00000532787 PDILTQ8N807 584 aa9.07□□□□□ -0.96
CTNND1-233ENST00000532787 SLC3A2P08195 630 aaKnown RBP9.07□□□□□ -0.96
CTNND1-233ENST00000532787 CCDC192P0DO97 292 aa9.07□□□□□ -0.96
CTNND1-233ENST00000532787 GAS2L2Q8NHY3 880 aa9.07□□□□□ -0.96
CTNND1-233ENST00000532787 TBC1D2BQ9UPU7 963 aa9.07□□□□□ -0.96
CTNND1-233ENST00000532787 EIF3JO75822 258 aaKnown RBP9.07□□□□□ -0.96
CTNND1-233ENST00000532787 MINK1Q8N4C8 1332 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-233ENST00000532787 NUTM2DQ5VT03 806 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-233ENST00000532787 IQCEQ6IPM2 695 aa9.07□□□□□ -0.96
CTNND1-233ENST00000532787 ZNHIT6Q9NWK9 470 aaKnown RBP9.07□□□□□ -0.96
CTNND1-233ENST00000532787 WDR33Q9C0J8 1336 aaKnown RBP9.06□□□□□ -0.96
CTNND1-233ENST00000532787 GOLGA6L7A0A1B0GV03 622 aa9.06□□□□□ -0.96
CTNND1-233ENST00000532787 TAF3Q5VWG9 929 aa9.06□□□□□ -0.96
CTNND1-233ENST00000532787 USP8P40818 1118 aa9.06□□□□□ -0.96
CTNND1-233ENST00000532787 RIC3Q7Z5B4 369 aa9.06□□□□□ -0.96
CTNND1-233ENST00000532787 ANKRD18AQ8IVF6 992 aa9.06□□□□□ -0.96
CTNND1-233ENST00000532787 PDCL2Q8N4E4 241 aa9.06□□□□□ -0.96
CTNND1-233ENST00000532787 SRCIN1Q9C0H9 1055 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms