RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-215ENST00000531558 TRAK1Q9UPV9 953 aa37.14■■■■□ 3.54
PICALM-215ENST00000531558 TONSLQ96HA7 1378 aa37.14■■■■□ 3.54
PICALM-215ENST00000531558 NBPF1Q3BBV0 1214 aa37.09■■■■□ 3.53
PICALM-215ENST00000531558 POGKQ9P215 609 aa37.09■■■■□ 3.53
PICALM-215ENST00000531558 C1orf167Q5SNV9 1468 aa37.08■■■■□ 3.53
PICALM-215ENST00000531558 BRINP3Q76B58 766 aa37.08■■■■□ 3.53
PICALM-215ENST00000531558 SAFB2Q14151 953 aaKnown RBP eCLIP37.06■■■■□ 3.52
PICALM-215ENST00000531558 CLSPNQ9HAW4 1339 aa37.05■■■■□ 3.52
PICALM-215ENST00000531558 TRPM1Q7Z4N2 1603 aa37.03■■■■□ 3.52
PICALM-215ENST00000531558 ARHGEF28Q8N1W1 1705 aaKnown RBP37.02■■■■□ 3.52
PICALM-215ENST00000531558 AHDC1Q5TGY3 1603 aaPredicted RBP37.02■■■■□ 3.52
PICALM-215ENST00000531558 PHLPP1O60346 1717 aa36.99■■■■□ 3.51
PICALM-215ENST00000531558 NBPF8Q3BBV2 869 aa36.98■■■■□ 3.51
PICALM-215ENST00000531558 ADGRB2O60241 1585 aa36.98■■■■□ 3.51
PICALM-215ENST00000531558 FMN2Q9NZ56 1722 aa36.96■■■■□ 3.51
PICALM-215ENST00000531558 COL16A1Q07092 1604 aaPredicted RBP36.95■■■■□ 3.51
PICALM-215ENST00000531558 ROCK2O75116 1388 aaKnown RBP36.94■■■■□ 3.5
PICALM-215ENST00000531558 ORAI2Q96SN7 254 aa36.94■■■■□ 3.5
PICALM-215ENST00000531558 NHSL1Q5SYE7 1610 aa36.92■■■■□ 3.5
PICALM-215ENST00000531558 MINK1Q8N4C8 1332 aaPredicted RBP36.92■■■■□ 3.5
PICALM-215ENST00000531558 NUTM2FA1L443 756 aa36.91■■■■□ 3.5
PICALM-215ENST00000531558 CCER1Q8TC90 406 aaPredicted RBP36.9■■■■□ 3.5
PICALM-215ENST00000531558 HIRIP3Q9BW71 556 aaPredicted RBP36.9■■■■□ 3.5
PICALM-215ENST00000531558 GPRASP1Q5JY77 1395 aa36.89■■■■□ 3.5
PICALM-215ENST00000531558 ESCO1Q5FWF5 840 aa36.88■■■■□ 3.49
PICALM-215ENST00000531558 RALGAPBQ86X10 1494 aa36.87■■■■□ 3.49
PICALM-215ENST00000531558 DDX17Q92841 729 aaKnown RBP36.84■■■■□ 3.49
PICALM-215ENST00000531558 ANKARQ7Z5J8 1434 aa36.84■■■■□ 3.49
PICALM-215ENST00000531558 JCADQ9P266 1359 aa36.83■■■■□ 3.49
PICALM-215ENST00000531558 CENPJQ9HC77 1338 aaPredicted RBP36.83■■■■□ 3.49
PICALM-215ENST00000531558 EIF3AQ14152 1382 aaKnown RBP36.82■■■■□ 3.49
PICALM-215ENST00000531558 WASLO00401 505 aaPredicted RBP36.82■■■■□ 3.48
PICALM-215ENST00000531558 TIMELESSQ9UNS1 1208 aa36.81■■■■□ 3.48
PICALM-215ENST00000531558 TULP4Q9NRJ4 1543 aa36.79■■■■□ 3.48
PICALM-215ENST00000531558 MED1Q15648 1581 aaPredicted RBP36.78■■■■□ 3.48
PICALM-215ENST00000531558 USP32Q8NFA0 1604 aa36.78■■■■□ 3.48
PICALM-215ENST00000531558 NPHP3Q7Z494 1330 aa36.77■■■■□ 3.48
PICALM-215ENST00000531558 KIF1AQ12756 1690 aa36.77■■■■□ 3.48
PICALM-215ENST00000531558 CARD11Q9BXL7 1154 aa36.76■■■■□ 3.48
PICALM-215ENST00000531558 SOS2Q07890 1332 aaPredicted RBP36.76■■■■□ 3.47
PICALM-215ENST00000531558 QRICH2Q9H0J4 1663 aa36.74■■■■□ 3.47
PICALM-215ENST00000531558 LRRC59Q96AG4 307 aaKnown RBP36.73■■■■□ 3.47
PICALM-215ENST00000531558 PRR36Q9H6K5 1346 aa36.73■■■■□ 3.47
PICALM-215ENST00000531558 RGPD8O14715 1765 aaPredicted RBP36.73■■■■□ 3.47
PICALM-215ENST00000531558 FOXO3O43524 673 aa36.72■■■■□ 3.47
PICALM-215ENST00000531558 PHF8Q9UPP1 1060 aa36.72■■■■□ 3.47
PICALM-215ENST00000531558 SHPRHQ149N8 1683 aa36.71■■■■□ 3.47
PICALM-215ENST00000531558 PXDNQ92626 1479 aa36.71■■■■□ 3.47
PICALM-215ENST00000531558 CDK19Q9BWU1 502 aa36.7■■■■□ 3.47
PICALM-215ENST00000531558 ATP7BP35670 1465 aa36.69■■■■□ 3.46
PICALM-215ENST00000531558 DISP3Q9P2K9 1392 aa36.69■■■■□ 3.46
PICALM-215ENST00000531558 SPATA31A6Q5VVP1 1343 aa36.65■■■■□ 3.46
PICALM-215ENST00000531558 PNPLA6Q8IY17 1366 aa36.65■■■■□ 3.46
PICALM-215ENST00000531558 XPCQ01831 940 aaPredicted RBP36.64■■■■□ 3.46
PICALM-215ENST00000531558 NUDT16Q96DE0 195 aaKnown RBP36.64■■■■□ 3.46
PICALM-215ENST00000531558 PMFBP1Q8TBY8 1022 aa36.62■■■■□ 3.45
PICALM-215ENST00000531558 ITSN1Q15811 1721 aa36.59■■■■□ 3.45
PICALM-215ENST00000531558 SBNO2Q9Y2G9 1366 aa36.58■■■■□ 3.45
PICALM-215ENST00000531558 SRPK2P78362 688 aaKnown RBP36.58■■■■□ 3.45
PICALM-215ENST00000531558 LRP6O75581 1613 aa36.58■■■■□ 3.45
PICALM-215ENST00000531558 KRT28Q7Z3Y7 464 aa36.57■■■■□ 3.44
PICALM-215ENST00000531558 TOPAZ1Q8N9V7 1692 aa36.57■■■■□ 3.44
PICALM-215ENST00000531558 EVC2Q86UK5 1308 aa36.56■■■■□ 3.44
PICALM-215ENST00000531558 CABP2Q9NPB3 220 aa36.55■■■■□ 3.44
PICALM-215ENST00000531558 CCDC61Q9Y6R9 512 aa36.55■■■■□ 3.44
PICALM-215ENST00000531558 PSME1Q06323 249 aa36.53■■■■□ 3.44
PICALM-215ENST00000531558 PHF23Q9BUL5 403 aaPredicted RBP36.52■■■■□ 3.44
PICALM-215ENST00000531558 NGDNQ8NEJ9 315 aaKnown RBP36.51■■■■□ 3.44
PICALM-215ENST00000531558 SPATA31A3Q5VYP0 1347 aa36.51■■■■□ 3.43
PICALM-215ENST00000531558 COL22A1Q8NFW1 1626 aaPredicted RBP36.5■■■■□ 3.43
PICALM-215ENST00000531558 SBNO1A3KN83 1393 aa36.5■■■■□ 3.43
PICALM-215ENST00000531558 TNS3Q68CZ2 1445 aa36.5■■■■□ 3.43
PICALM-215ENST00000531558 NUTM2BA6NNL0 878 aaPredicted RBP36.49■■■■□ 3.43
PICALM-215ENST00000531558 NUTM2EB1AL46 878 aaPredicted RBP36.49■■■■□ 3.43
PICALM-215ENST00000531558 NUTM2AQ8IVF1 878 aaPredicted RBP36.49■■■■□ 3.43
PICALM-215ENST00000531558 PLEKHG3A1L390 1219 aa36.47■■■■□ 3.43
PICALM-215ENST00000531558 PPIP5K1Q6PFW1 1433 aa36.46■■■■□ 3.43
PICALM-215ENST00000531558 POLR3AO14802 1390 aaPredicted RBP36.46■■■■□ 3.43
PICALM-215ENST00000531558 USP47Q96K76 1375 aa36.46■■■■□ 3.43
PICALM-215ENST00000531558 MEX3CQ5U5Q3 659 aaKnown RBP36.44■■■■□ 3.42
PICALM-215ENST00000531558 TRPM3Q9HCF6 1732 aaPredicted RBP36.43■■■■□ 3.42
PICALM-215ENST00000531558 ACEP12821 1306 aa36.43■■■■□ 3.42
PICALM-215ENST00000531558 ST20-MTHFSA0A0A6YYL1 179 aa36.43■■■■□ 3.42
PICALM-215ENST00000531558 TESK2Q96S53 571 aa36.4■■■■□ 3.42
PICALM-215ENST00000531558 ARHGEF10O15013 1369 aa36.4■■■■□ 3.42
PICALM-215ENST00000531558 ATAD2Q6PL18 1390 aa36.39■■■■□ 3.42
PICALM-215ENST00000531558 RGS17Q9UGC6 210 aaPredicted RBP36.38■■■■□ 3.41
PICALM-215ENST00000531558 CABP1Q9NZU7 370 aa36.37■■■■□ 3.41
PICALM-215ENST00000531558 LMOD2Q6P5Q4 547 aa36.35■■■■□ 3.41
PICALM-215ENST00000531558 ALS2Q96Q42 1657 aa36.34■■■■□ 3.41
PICALM-215ENST00000531558 ADAMTS2O95450 1211 aa36.33■■■■□ 3.41
PICALM-215ENST00000531558 SLC24A1O60721 1099 aa36.31■■■■□ 3.4
PICALM-215ENST00000531558 PAK3O75914 559 aaPredicted RBP36.31■■■■□ 3.4
PICALM-215ENST00000531558 C8orf37Q96NL8 207 aa36.28■■■■□ 3.4
PICALM-215ENST00000531558 PUS7Q96PZ0 661 aaKnown RBP36.28■■■■□ 3.4
PICALM-215ENST00000531558 ILDR2Q71H61 639 aa36.27■■■■□ 3.4
PICALM-215ENST00000531558 USP6P35125 1406 aa36.25■■■■□ 3.39
PICALM-215ENST00000531558 CABLES1Q8TDN4 633 aa36.25■■■■□ 3.39
PICALM-215ENST00000531558 BRD4O60885 1362 aaPredicted RBP36.25■■■■□ 3.39
PICALM-215ENST00000531558 AFF2P51816 1311 aa36.23■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms