RNA–Protein interactions for RNA: ENST00000531280.1

PCNX3-205, Transcript of pecanex 3, humanhuman

TSL 5

Gene PCNX3, Length 472 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-205ENST00000531280 CFAP70Q5T0N1 1121 aa23.65■■□□□ 1.38
PCNX3-205ENST00000531280 IFT172Q9UG01 1749 aa23.64■■□□□ 1.38
PCNX3-205ENST00000531280 SHPRHQ149N8 1683 aa23.64■■□□□ 1.37
PCNX3-205ENST00000531280 SOS2Q07890 1332 aaPredicted RBP23.63■■□□□ 1.37
PCNX3-205ENST00000531280 NHSL1Q5SYE7 1610 aa23.62■■□□□ 1.37
PCNX3-205ENST00000531280 ZNF772Q68DY9 489 aaPredicted RBP23.62■■□□□ 1.37
PCNX3-205ENST00000531280 NRXN1Q9ULB1 1477 aa23.62■■□□□ 1.37
PCNX3-205ENST00000531280 YTHDC2Q9H6S0 1430 aaKnown RBP23.61■■□□□ 1.37
PCNX3-205ENST00000531280 ESCO1Q5FWF5 840 aa23.61■■□□□ 1.37
PCNX3-205ENST00000531280 PLEKHH1Q9ULM0 1364 aa23.61■■□□□ 1.37
PCNX3-205ENST00000531280 PNPLA6Q8IY17 1366 aa23.6■■□□□ 1.37
PCNX3-205ENST00000531280 DHX57Q6P158 1386 aaKnown RBP23.59■■□□□ 1.37
PCNX3-205ENST00000531280 MYOM2P54296 1465 aa23.57■■□□□ 1.36
PCNX3-205ENST00000531280 NUTM2FA1L443 756 aa23.56■■□□□ 1.36
PCNX3-205ENST00000531280 DCAF11Q8TEB1 546 aa23.56■■□□□ 1.36
PCNX3-205ENST00000531280 KDM2AQ9Y2K7 1162 aa23.56■■□□□ 1.36
PCNX3-205ENST00000531280 FOXO3O43524 673 aa23.55■■□□□ 1.36
PCNX3-205ENST00000531280 STAC3Q96MF2 364 aa23.55■■□□□ 1.36
PCNX3-205ENST00000531280 LAMC1P11047 1609 aa23.55■■□□□ 1.36
PCNX3-205ENST00000531280 CDC42BPGQ6DT37 1551 aa23.54■■□□□ 1.36
PCNX3-205ENST00000531280 NPHP3Q7Z494 1330 aa23.54■■□□□ 1.36
PCNX3-205ENST00000531280 AFF2P51816 1311 aa23.53■■□□□ 1.36
PCNX3-205ENST00000531280 PRAM1Q96QH2 718 aa23.51■■□□□ 1.35
PCNX3-205ENST00000531280 RXRBP28702 533 aa23.5■■□□□ 1.35
PCNX3-205ENST00000531280 C8orf37Q96NL8 207 aa23.5■■□□□ 1.35
PCNX3-205ENST00000531280 ADAMTS2O95450 1211 aa23.49■■□□□ 1.35
PCNX3-205ENST00000531280 KNDC1Q76NI1 1749 aa23.49■■□□□ 1.35
PCNX3-205ENST00000531280 XPCQ01831 940 aaPredicted RBP23.48■■□□□ 1.35
PCNX3-205ENST00000531280 SAFB2Q14151 953 aaKnown RBP eCLIP23.48■■□□□ 1.35
PCNX3-205ENST00000531280 NGLY1Q96IV0 654 aa23.48■■□□□ 1.35
PCNX3-205ENST00000531280 POGKQ9P215 609 aa23.48■■□□□ 1.35
PCNX3-205ENST00000531280 QTRT2Q9H974 415 aaKnown RBP23.47■■□□□ 1.35
PCNX3-205ENST00000531280 TRAK1Q9UPV9 953 aa23.46■■□□□ 1.35
PCNX3-205ENST00000531280 PXDNQ92626 1479 aa23.44■■□□□ 1.34
PCNX3-205ENST00000531280 KRT28Q7Z3Y7 464 aa23.43■■□□□ 1.34
PCNX3-205ENST00000531280 PHF8Q9UPP1 1060 aa23.43■■□□□ 1.34
PCNX3-205ENST00000531280 ADGRB1O14514 1584 aa23.43■■□□□ 1.34
PCNX3-205ENST00000531280 DLC1Q96QB1 1528 aa23.42■■□□□ 1.34
PCNX3-205ENST00000531280 FNBP4Q8N3X1 1017 aaPredicted RBP23.41■■□□□ 1.34
PCNX3-205ENST00000531280 SPATA31A3Q5VYP0 1347 aa23.4■■□□□ 1.34
PCNX3-205ENST00000531280 FMN2Q9NZ56 1722 aa23.4■■□□□ 1.34
PCNX3-205ENST00000531280 RBM6P78332 1123 aaKnown RBP23.4■■□□□ 1.34
PCNX3-205ENST00000531280 USP21Q9UK80 565 aa23.38■■□□□ 1.33
PCNX3-205ENST00000531280 PSME1Q06323 249 aa23.37■■□□□ 1.33
PCNX3-205ENST00000531280 HIRIP3Q9BW71 556 aaPredicted RBP23.37■■□□□ 1.33
PCNX3-205ENST00000531280 CDK12Q9NYV4 1490 aaPredicted RBP23.36■■□□□ 1.33
PCNX3-205ENST00000531280 COL22A1Q8NFW1 1626 aaPredicted RBP23.36■■□□□ 1.33
PCNX3-205ENST00000531280 MINK1Q8N4C8 1332 aaPredicted RBP23.35■■□□□ 1.33
PCNX3-205ENST00000531280 PMFBP1Q8TBY8 1022 aa23.34■■□□□ 1.33
PCNX3-205ENST00000531280 UPF1Q92900 1129 aaKnown RBP eCLIP23.34■■□□□ 1.33
PCNX3-205ENST00000531280 WASLO00401 505 aaPredicted RBP23.33■■□□□ 1.33
PCNX3-205ENST00000531280 TRPC5Q9UL62 973 aaPredicted RBP23.33■■□□□ 1.33
PCNX3-205ENST00000531280 ANKARQ7Z5J8 1434 aa23.32■■□□□ 1.32
PCNX3-205ENST00000531280 KIF1AQ12756 1690 aa23.3■■□□□ 1.32
PCNX3-205ENST00000531280 PRR36Q9H6K5 1346 aa23.3■■□□□ 1.32
PCNX3-205ENST00000531280 RGPD8O14715 1765 aaPredicted RBP23.29■■□□□ 1.32
PCNX3-205ENST00000531280 SBNO1A3KN83 1393 aa23.29■■□□□ 1.32
PCNX3-205ENST00000531280 NBPF1Q3BBV0 1214 aa23.28■■□□□ 1.32
PCNX3-205ENST00000531280 BCL9LQ86UU0 1499 aa23.28■■□□□ 1.32
PCNX3-205ENST00000531280 ADGRB2O60241 1585 aa23.27■■□□□ 1.32
PCNX3-205ENST00000531280 CABLES1Q8TDN4 633 aa23.27■■□□□ 1.32
PCNX3-205ENST00000531280 ATRNO75882 1429 aa23.26■■□□□ 1.31
PCNX3-205ENST00000531280 EIF3AQ14152 1382 aaKnown RBP23.26■■□□□ 1.31
PCNX3-205ENST00000531280 TNS3Q68CZ2 1445 aa23.25■■□□□ 1.31
PCNX3-205ENST00000531280 LMOD2Q6P5Q4 547 aa23.25■■□□□ 1.31
PCNX3-205ENST00000531280 USP32Q8NFA0 1604 aa23.25■■□□□ 1.31
PCNX3-205ENST00000531280 RGS12O14924 1447 aa23.25■■□□□ 1.31
PCNX3-205ENST00000531280 UNC5CLQ8IV45 518 aa23.23■■□□□ 1.31
PCNX3-205ENST00000531280 L3MBTL2Q969R5 705 aa23.23■■□□□ 1.31
PCNX3-205ENST00000531280 NUDT16Q96DE0 195 aaKnown RBP23.23■■□□□ 1.31
PCNX3-205ENST00000531280 CDK19Q9BWU1 502 aa23.23■■□□□ 1.31
PCNX3-205ENST00000531280 GJD4Q96KN9 370 aaPredicted RBP23.22■■□□□ 1.31
PCNX3-205ENST00000531280 SIN3AQ96ST3 1273 aa23.22■■□□□ 1.31
PCNX3-205ENST00000531280 ARHGEF10O15013 1369 aa23.22■■□□□ 1.31
PCNX3-205ENST00000531280 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
PCNX3-205ENST00000531280 HAP1P54257 671 aaPredicted RBP23.21■■□□□ 1.31
PCNX3-205ENST00000531280 NGDNQ8NEJ9 315 aaKnown RBP23.21■■□□□ 1.31
PCNX3-205ENST00000531280 GPRASP1Q5JY77 1395 aa23.21■■□□□ 1.31
PCNX3-205ENST00000531280 TULP4Q9NRJ4 1543 aa23.21■■□□□ 1.31
PCNX3-205ENST00000531280 SLIT2O94813 1529 aa23.18■■□□□ 1.3
PCNX3-205ENST00000531280 FAM83GA6ND36 823 aa23.18■■□□□ 1.3
PCNX3-205ENST00000531280 MARF1Q9Y4F3 1742 aaKnown RBP23.16■■□□□ 1.3
PCNX3-205ENST00000531280 NEUROD1Q13562 356 aa23.16■■□□□ 1.3
PCNX3-205ENST00000531280 ARHGEF28Q8N1W1 1705 aaKnown RBP23.16■■□□□ 1.3
PCNX3-205ENST00000531280 KIAA1210Q9ULL0 1709 aa23.16■■□□□ 1.3
PCNX3-205ENST00000531280 CCDC61Q9Y6R9 512 aa23.15■■□□□ 1.3
PCNX3-205ENST00000531280 PLEKHG3A1L390 1219 aa23.13■■□□□ 1.29
PCNX3-205ENST00000531280 PAK3O75914 559 aaPredicted RBP23.13■■□□□ 1.29
PCNX3-205ENST00000531280 VPS72Q15906 364 aa23.12■■□□□ 1.29
PCNX3-205ENST00000531280 NBPF8Q3BBV2 869 aa23.12■■□□□ 1.29
PCNX3-205ENST00000531280 ATP7BP35670 1465 aa23.11■■□□□ 1.29
PCNX3-205ENST00000531280 CENPJQ9HC77 1338 aaPredicted RBP23.11■■□□□ 1.29
PCNX3-205ENST00000531280 ATAD2Q6PL18 1390 aa23.11■■□□□ 1.29
PCNX3-205ENST00000531280 TRPM3Q9HCF6 1732 aaPredicted RBP23.1■■□□□ 1.29
PCNX3-205ENST00000531280 ACEP12821 1306 aa23.09■■□□□ 1.29
PCNX3-205ENST00000531280 ONECUT3O60422 494 aaPredicted RBP23.09■■□□□ 1.29
PCNX3-205ENST00000531280 RALGAPBQ86X10 1494 aa23.09■■□□□ 1.29
PCNX3-205ENST00000531280 POLR3AO14802 1390 aaPredicted RBP23.08■■□□□ 1.29
PCNX3-205ENST00000531280 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.06■■□□□ 1.28
PCNX3-205ENST00000531280 SRPK2P78362 688 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms