RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	ZEB1	P37275	1124 aa	Predicted RBP	30.12	■■■□□ 2.41
PABPC4-225	ENST00000531243	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	30.12	■■■□□ 2.41
PABPC4-225	ENST00000531243	DCC	P43146	1447 aa		30.1	■■■□□ 2.41
PABPC4-225	ENST00000531243	ATF3	P18847	181 aa		30.09	■■■□□ 2.41
PABPC4-225	ENST00000531243	CENPJ	Q9HC77	1338 aa	Predicted RBP	30.09	■■■□□ 2.41
PABPC4-225	ENST00000531243	PLEKHH1	Q9ULM0	1364 aa		30.09	■■■□□ 2.41
PABPC4-225	ENST00000531243	TOM1	O60784	492 aa		30.08	■■■□□ 2.41
PABPC4-225	ENST00000531243	SAFB2	Q14151	953 aa	Known RBP eCLIP	30.08	■■■□□ 2.41
PABPC4-225	ENST00000531243	CADPS2	Q86UW7	1296 aa		30.08	■■■□□ 2.41
PABPC4-225	ENST00000531243	QRICH2	Q9H0J4	1663 aa		30.07	■■■□□ 2.41
PABPC4-225	ENST00000531243	CDC42BPG	Q6DT37	1551 aa		30.04	■■■□□ 2.4
PABPC4-225	ENST00000531243	ADGRB2	O60241	1585 aa		30.03	■■■□□ 2.4
PABPC4-225	ENST00000531243	SLC24A1	O60721	1099 aa		30.02	■■■□□ 2.4
PABPC4-225	ENST00000531243	UBAP1L	F5GYI3	381 aa		30.01	■■■□□ 2.39
PABPC4-225	ENST00000531243	USP47	Q96K76	1375 aa		30.01	■■■□□ 2.39
PABPC4-225	ENST00000531243	MINK1	Q8N4C8	1332 aa	Predicted RBP	30	■■■□□ 2.39
PABPC4-225	ENST00000531243	FMN2	Q9NZ56	1722 aa		29.96	■■■□□ 2.39
PABPC4-225	ENST00000531243	EIF4G2	P78344	907 aa	Known RBP eCLIP	29.95	■■■□□ 2.39
PABPC4-225	ENST00000531243	HIRIP3	Q9BW71	556 aa	Predicted RBP	29.95	■■■□□ 2.39
PABPC4-225	ENST00000531243	SBNO2	Q9Y2G9	1366 aa		29.94	■■■□□ 2.38
PABPC4-225	ENST00000531243	SLAIN2	Q9P270	581 aa		29.94	■■■□□ 2.38
PABPC4-225	ENST00000531243	ST20-MTHFS	A0A0A6YYL1	179 aa		29.93	■■■□□ 2.38
PABPC4-225	ENST00000531243	WASL	O00401	505 aa	Predicted RBP	29.93	■■■□□ 2.38
PABPC4-225	ENST00000531243	EVC2	Q86UK5	1308 aa		29.92	■■■□□ 2.38
PABPC4-225	ENST00000531243	MST1R	Q04912	1400 aa		29.9	■■■□□ 2.38
PABPC4-225	ENST00000531243	SCAF1	Q9H7N4	1312 aa	Known RBP	29.89	■■■□□ 2.38
PABPC4-225	ENST00000531243	PIP4K2B	P78356	416 aa		29.87	■■■□□ 2.37
PABPC4-225	ENST00000531243	FBXO41	Q8TF61	875 aa		29.87	■■■□□ 2.37
PABPC4-225	ENST00000531243	CDK19	Q9BWU1	502 aa		29.87	■■■□□ 2.37
PABPC4-225	ENST00000531243	ANKAR	Q7Z5J8	1434 aa		29.87	■■■□□ 2.37
PABPC4-225	ENST00000531243	TULP4	Q9NRJ4	1543 aa		29.86	■■■□□ 2.37
PABPC4-225	ENST00000531243	ITSN1	Q15811	1721 aa		29.86	■■■□□ 2.37
PABPC4-225	ENST00000531243	C1orf167	Q5SNV9	1468 aa		29.86	■■■□□ 2.37
PABPC4-225	ENST00000531243	RGPD8	O14715	1765 aa	Predicted RBP	29.85	■■■□□ 2.37
PABPC4-225	ENST00000531243	SRPK2	P78362	688 aa	Known RBP	29.85	■■■□□ 2.37
PABPC4-225	ENST00000531243	ROBO1	Q9Y6N7	1651 aa		29.84	■■■□□ 2.37
PABPC4-225	ENST00000531243	NUTM2F	A1L443	756 aa		29.83	■■■□□ 2.37
PABPC4-225	ENST00000531243	HSPA5	P11021	654 aa	Known RBP	29.82	■■■□□ 2.36
PABPC4-225	ENST00000531243	TMF1	P82094	1093 aa		29.82	■■■□□ 2.36
PABPC4-225	ENST00000531243	KIF1A	Q12756	1690 aa		29.8	■■■□□ 2.36
PABPC4-225	ENST00000531243	ESCO1	Q5FWF5	840 aa		29.8	■■■□□ 2.36
PABPC4-225	ENST00000531243	TESK2	Q96S53	571 aa		29.8	■■■□□ 2.36
PABPC4-225	ENST00000531243	CDCA8	Q53HL2	280 aa		29.79	■■■□□ 2.36
PABPC4-225	ENST00000531243	USP32	Q8NFA0	1604 aa		29.78	■■■□□ 2.36
PABPC4-225	ENST00000531243	NUDT16	Q96DE0	195 aa	Known RBP	29.77	■■■□□ 2.36
PABPC4-225	ENST00000531243	PUS7	Q96PZ0	661 aa	Known RBP	29.77	■■■□□ 2.36
PABPC4-225	ENST00000531243	BRINP3	Q76B58	766 aa		29.76	■■■□□ 2.35
PABPC4-225	ENST00000531243	CABP2	Q9NPB3	220 aa		29.76	■■■□□ 2.35
PABPC4-225	ENST00000531243	ATAD2	Q6PL18	1390 aa		29.76	■■■□□ 2.35
PABPC4-225	ENST00000531243	ATP7B	P35670	1465 aa		29.75	■■■□□ 2.35
PABPC4-225	ENST00000531243	CCDC61	Q9Y6R9	512 aa		29.75	■■■□□ 2.35
PABPC4-225	ENST00000531243	ORAI2	Q96SN7	254 aa		29.74	■■■□□ 2.35
PABPC4-225	ENST00000531243	TOPAZ1	Q8N9V7	1692 aa		29.73	■■■□□ 2.35
PABPC4-225	ENST00000531243	PHF8	Q9UPP1	1060 aa		29.72	■■■□□ 2.35
PABPC4-225	ENST00000531243	PRR36	Q9H6K5	1346 aa		29.71	■■■□□ 2.35
PABPC4-225	ENST00000531243	NHSL1	Q5SYE7	1610 aa		29.7	■■■□□ 2.34
PABPC4-225	ENST00000531243	PHLPP1	O60346	1717 aa		29.68	■■■□□ 2.34
PABPC4-225	ENST00000531243	PPIP5K1	Q6PFW1	1433 aa		29.68	■■■□□ 2.34
PABPC4-225	ENST00000531243	NPHP3	Q7Z494	1330 aa		29.68	■■■□□ 2.34
PABPC4-225	ENST00000531243	AHDC1	Q5TGY3	1603 aa	Predicted RBP	29.67	■■■□□ 2.34
PABPC4-225	ENST00000531243	DISP3	Q9P2K9	1392 aa		29.66	■■■□□ 2.34
PABPC4-225	ENST00000531243	NGDN	Q8NEJ9	315 aa	Known RBP	29.65	■■■□□ 2.34
PABPC4-225	ENST00000531243	PMFBP1	Q8TBY8	1022 aa		29.65	■■■□□ 2.34
PABPC4-225	ENST00000531243	PLEKHG3	A1L390	1219 aa		29.64	■■■□□ 2.34
PABPC4-225	ENST00000531243	NINL	Q9Y2I6	1382 aa		29.64	■■■□□ 2.33
PABPC4-225	ENST00000531243	FOXO3	O43524	673 aa		29.62	■■■□□ 2.33
PABPC4-225	ENST00000531243	PSME1	Q06323	249 aa		29.61	■■■□□ 2.33
PABPC4-225	ENST00000531243	TMC1	Q8TDI8	760 aa		29.61	■■■□□ 2.33
PABPC4-225	ENST00000531243	CABP1	Q9NZU7	370 aa		29.61	■■■□□ 2.33
PABPC4-225	ENST00000531243	POLR3A	O14802	1390 aa	Predicted RBP	29.58	■■■□□ 2.33
PABPC4-225	ENST00000531243	ACE	P12821	1306 aa		29.57	■■■□□ 2.32
PABPC4-225	ENST00000531243	POLR3GL	Q9BT43	218 aa		29.57	■■■□□ 2.32
PABPC4-225	ENST00000531243	ZNF692	Q9BU19	519 aa	Predicted RBP	29.57	■■■□□ 2.32
PABPC4-225	ENST00000531243	HSPA1L	P34931	641 aa		29.56	■■■□□ 2.32
PABPC4-225	ENST00000531243	AKAP12	Q02952	1782 aa		29.56	■■■□□ 2.32
PABPC4-225	ENST00000531243	SOS2	Q07890	1332 aa	Predicted RBP	29.55	■■■□□ 2.32
PABPC4-225	ENST00000531243	KRT28	Q7Z3Y7	464 aa		29.55	■■■□□ 2.32
PABPC4-225	ENST00000531243	LRRC59	Q96AG4	307 aa	Known RBP	29.55	■■■□□ 2.32
PABPC4-225	ENST00000531243	TERF2IP	Q9NYB0	399 aa		29.55	■■■□□ 2.32
PABPC4-225	ENST00000531243	COL16A1	Q07092	1604 aa	Predicted RBP	29.55	■■■□□ 2.32
PABPC4-225	ENST00000531243	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	29.54	■■■□□ 2.32
PABPC4-225	ENST00000531243	DDX17	Q92841	729 aa	Known RBP	29.54	■■■□□ 2.32
PABPC4-225	ENST00000531243	BRD4	O60885	1362 aa	Predicted RBP	29.52	■■■□□ 2.32
PABPC4-225	ENST00000531243	PXDN	Q92626	1479 aa		29.52	■■■□□ 2.32
PABPC4-225	ENST00000531243	SLC12A5	Q9H2X9	1139 aa		29.51	■■■□□ 2.31
PABPC4-225	ENST00000531243	ILDR1	Q86SU0	546 aa	Predicted RBP	29.5	■■■□□ 2.31
PABPC4-225	ENST00000531243	MYOM1	P52179	1685 aa		29.5	■■■□□ 2.31
PABPC4-225	ENST00000531243	XPC	Q01831	940 aa	Predicted RBP	29.49	■■■□□ 2.31
PABPC4-225	ENST00000531243	SBNO1	A3KN83	1393 aa		29.49	■■■□□ 2.31
PABPC4-225	ENST00000531243	MON2	Q7Z3U7	1717 aa		29.48	■■■□□ 2.31
PABPC4-225	ENST00000531243	CPSF1	Q10570	1443 aa	Known RBP	29.47	■■■□□ 2.31
PABPC4-225	ENST00000531243	TRPM3	Q9HCF6	1732 aa	Predicted RBP	29.47	■■■□□ 2.31
PABPC4-225	ENST00000531243	KTN1	Q86UP2	1357 aa	Known RBP	29.47	■■■□□ 2.31
PABPC4-225	ENST00000531243	C11orf95	C9JLR9	678 aa	Predicted RBP	29.46	■■■□□ 2.31
PABPC4-225	ENST00000531243	KIF7	Q2M1P5	1343 aa		29.45	■■■□□ 2.31
PABPC4-225	ENST00000531243	USP6	P35125	1406 aa		29.45	■■■□□ 2.31
PABPC4-225	ENST00000531243	ANKRD36B	Q8N2N9	1353 aa		29.45	■■■□□ 2.31
PABPC4-225	ENST00000531243	JCAD	Q9P266	1359 aa		29.45	■■■□□ 2.31
PABPC4-225	ENST00000531243	PAK3	O75914	559 aa	Predicted RBP	29.45	■■■□□ 2.31
PABPC4-225	ENST00000531243	SHPRH	Q149N8	1683 aa		29.44	■■■□□ 2.3

Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms