RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 ZNF598Q86UK7 904 aaKnown RBP13.73□□□□□ -0.21
CHKA-205ENST00000530730 NESP48681 1621 aa13.72□□□□□ -0.21
CHKA-205ENST00000530730 BAZ1AQ9NRL2 1556 aaPredicted RBP13.72□□□□□ -0.21
CHKA-205ENST00000530730 LIAT1Q6ZQX7 453 aa13.72□□□□□ -0.21
CHKA-205ENST00000530730 FAM160A2Q8N612 972 aaPredicted RBP13.72□□□□□ -0.21
CHKA-205ENST00000530730 PDZRN3Q9UPQ7 1066 aa13.71□□□□□ -0.21
CHKA-205ENST00000530730 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.21
CHKA-205ENST00000530730 PRR20EP86478 221 aa13.69□□□□□ -0.22
CHKA-205ENST00000530730 PRR20CP86479 221 aa13.69□□□□□ -0.22
CHKA-205ENST00000530730 PRR20DP86480 221 aa13.69□□□□□ -0.22
CHKA-205ENST00000530730 PRR20BP86481 221 aa13.69□□□□□ -0.22
CHKA-205ENST00000530730 PRR20AP86496 221 aa13.69□□□□□ -0.22
CHKA-205ENST00000530730 AMHR2Q16671 573 aa13.69□□□□□ -0.22
CHKA-205ENST00000530730 PLA2G2CQ5R387 149 aa13.69□□□□□ -0.22
CHKA-205ENST00000530730 KRI1Q8N9T8 703 aaKnown RBP13.69□□□□□ -0.22
CHKA-205ENST00000530730 RNF19BQ6ZMZ0 732 aa13.68□□□□□ -0.22
CHKA-205ENST00000530730 TRIM67Q6ZTA4 783 aa13.68□□□□□ -0.22
CHKA-205ENST00000530730 HOXA2O43364 376 aa13.66□□□□□ -0.22
CHKA-205ENST00000530730 RPIAP49247 311 aa13.66□□□□□ -0.22
CHKA-205ENST00000530730 MROH2BQ7Z745 1585 aa13.66□□□□□ -0.22
CHKA-205ENST00000530730 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
CHKA-205ENST00000530730 ZNF697Q5TEC3 545 aa13.64□□□□□ -0.23
CHKA-205ENST00000530730 TRAF7Q6Q0C0 670 aa13.64□□□□□ -0.23
CHKA-205ENST00000530730 REPIN1Q9BWE0 567 aaKnown RBP13.64□□□□□ -0.23
CHKA-205ENST00000530730 FCF1Q9Y324 198 aaKnown RBP13.64□□□□□ -0.23
CHKA-205ENST00000530730 LCE2BO14633 110 aa13.63□□□□□ -0.23
CHKA-205ENST00000530730 MMP16P51512 607 aa13.63□□□□□ -0.23
CHKA-205ENST00000530730 USB1Q9BQ65 265 aaKnown RBP13.62□□□□□ -0.23
CHKA-205ENST00000530730 PRDM9Q9NQV7 894 aa13.62□□□□□ -0.23
CHKA-205ENST00000530730 GDF9O60383 454 aa13.6□□□□□ -0.23
CHKA-205ENST00000530730 SSTR3P32745 418 aaPredicted RBP13.6□□□□□ -0.23
CHKA-205ENST00000530730 NUTM1Q86Y26 1132 aa13.59□□□□□ -0.23
CHKA-205ENST00000530730 DXOO77932 396 aaKnown RBP13.57□□□□□ -0.24
CHKA-205ENST00000530730 TTLL12Q14166 644 aaPredicted RBP13.57□□□□□ -0.24
CHKA-205ENST00000530730 HLA-CQ95604 372 aa13.57□□□□□ -0.24
CHKA-205ENST00000530730 CD2BP2O95400 341 aaKnown RBP13.56□□□□□ -0.24
CHKA-205ENST00000530730 LAMC3Q9Y6N6 1575 aa13.56□□□□□ -0.24
CHKA-205ENST00000530730 GIGYF2Q6Y7W6 1299 aaKnown RBP13.55□□□□□ -0.24
CHKA-205ENST00000530730 PDS5BQ9NTI5 1447 aa13.55□□□□□ -0.24
CHKA-205ENST00000530730 DGAT1O75907 488 aa13.54□□□□□ -0.24
CHKA-205ENST00000530730 AK7Q96M32 723 aa13.54□□□□□ -0.24
CHKA-205ENST00000530730 TRIM66O15016 1216 aa13.53□□□□□ -0.24
CHKA-205ENST00000530730 PKD2L1Q9P0L9 805 aa13.53□□□□□ -0.24
CHKA-205ENST00000530730 SPIRE2Q8WWL2 714 aa13.52□□□□□ -0.25
CHKA-205ENST00000530730 CADPSQ9ULU8 1353 aa13.52□□□□□ -0.25
CHKA-205ENST00000530730 THOC2Q8NI27 1593 aaKnown RBP13.52□□□□□ -0.25
CHKA-205ENST00000530730 ZBTB24O43167 697 aaPredicted RBP13.51□□□□□ -0.25
CHKA-205ENST00000530730 GUCA2AQ02747 115 aa13.51□□□□□ -0.25
CHKA-205ENST00000530730 RETREG3Q86VR2 466 aa13.51□□□□□ -0.25
CHKA-205ENST00000530730 PARP9Q8IXQ6 854 aa13.51□□□□□ -0.25
CHKA-205ENST00000530730 FDX1P10109 184 aa13.5□□□□□ -0.25
CHKA-205ENST00000530730 TNFRSF10AO00220 468 aa13.49□□□□□ -0.25
CHKA-205ENST00000530730 GJA5P36382 358 aa13.48□□□□□ -0.25
CHKA-205ENST00000530730 DIXDC1Q155Q3 683 aa13.48□□□□□ -0.25
CHKA-205ENST00000530730 PKDCCQ504Y2 493 aa13.48□□□□□ -0.25
CHKA-205ENST00000530730 PCDHGC3Q9UN70 934 aa13.48□□□□□ -0.25
CHKA-205ENST00000530730 JUNDP17535 347 aa13.47□□□□□ -0.25
CHKA-205ENST00000530730 BEGAINQ9BUH8 593 aa13.46□□□□□ -0.25
CHKA-205ENST00000530730 KIF21AQ7Z4S6 1674 aa13.45□□□□□ -0.26
CHKA-205ENST00000530730 TRIM32Q13049 653 aa13.45□□□□□ -0.26
CHKA-205ENST00000530730 WIZO95785 1651 aa13.44□□□□□ -0.26
CHKA-205ENST00000530730 MOXD2PA6NHM9 499 aa13.44□□□□□ -0.26
CHKA-205ENST00000530730 SYMPKQ92797 1274 aaKnown RBP13.44□□□□□ -0.26
CHKA-205ENST00000530730 TOR4AQ9NXH8 423 aa13.44□□□□□ -0.26
CHKA-205ENST00000530730 MYT1Q01538 1121 aa13.43□□□□□ -0.26
CHKA-205ENST00000530730 FOXC1Q12948 553 aa13.43□□□□□ -0.26
CHKA-205ENST00000530730 FAM187AA6NFU0 413 aa13.42□□□□□ -0.26
CHKA-205ENST00000530730 SPDYE5A6NIY4 337 aa13.42□□□□□ -0.26
CHKA-205ENST00000530730 WNT7AO00755 349 aa13.42□□□□□ -0.26
CHKA-205ENST00000530730 MS4A1P11836 297 aa13.41□□□□□ -0.26
CHKA-205ENST00000530730 C6orf229H3BNL8 230 aa13.4□□□□□ -0.26
CHKA-205ENST00000530730 NDUFV2P19404 249 aa13.4□□□□□ -0.26
CHKA-205ENST00000530730 MRC2Q9UBG0 1479 aa13.4□□□□□ -0.26
CHKA-205ENST00000530730 PDE4DQ08499 809 aa13.39□□□□□ -0.27
CHKA-205ENST00000530730 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
CHKA-205ENST00000530730 DESI1Q6ICB0 168 aa13.38□□□□□ -0.27
CHKA-205ENST00000530730 RSF1Q96T23 1441 aaPredicted RBP13.38□□□□□ -0.27
CHKA-205ENST00000530730 AVPP01185 164 aa13.37□□□□□ -0.27
CHKA-205ENST00000530730 WNT7BP56706 349 aa13.37□□□□□ -0.27
CHKA-205ENST00000530730 MTMR2Q13614 643 aa13.37□□□□□ -0.27
CHKA-205ENST00000530730 RSBN1LQ6PCB5 846 aaPredicted RBP13.37□□□□□ -0.27
CHKA-205ENST00000530730 CYP4X1Q8N118 509 aa13.37□□□□□ -0.27
CHKA-205ENST00000530730 CRIPAKQ8N1N5 446 aa13.37□□□□□ -0.27
CHKA-205ENST00000530730 CCDC24Q8N4L8 307 aa13.37□□□□□ -0.27
CHKA-205ENST00000530730 NUDT12Q9BQG2 462 aa13.37□□□□□ -0.27
CHKA-205ENST00000530730 SLC24A3Q9HC58 644 aa13.36□□□□□ -0.27
CHKA-205ENST00000530730 SPTLC1O15269 473 aa13.35□□□□□ -0.27
CHKA-205ENST00000530730 PTPRNQ16849 979 aa13.35□□□□□ -0.27
CHKA-205ENST00000530730 WDR62O43379 1518 aa13.34□□□□□ -0.27
CHKA-205ENST00000530730 CCNYL3P0C7X3 344 aa13.33□□□□□ -0.28
CHKA-205ENST00000530730 CFTRP13569 1480 aa13.33□□□□□ -0.28
CHKA-205ENST00000530730 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
CHKA-205ENST00000530730 CEP164Q9UPV0 1460 aa13.33□□□□□ -0.28
CHKA-205ENST00000530730 SNIP1Q8TAD8 396 aaKnown RBP13.32□□□□□ -0.28
CHKA-205ENST00000530730 PRR7Q8TB68 274 aa13.32□□□□□ -0.28
CHKA-205ENST00000530730 BCANQ96GW7 911 aa13.32□□□□□ -0.28
CHKA-205ENST00000530730 PRPF38BQ5VTL8 546 aaKnown RBP13.31□□□□□ -0.28
CHKA-205ENST00000530730 ZNF787Q6DD87 383 aa13.31□□□□□ -0.28
CHKA-205ENST00000530730 MRGPRX2Q96LB1 330 aa13.31□□□□□ -0.28
CHKA-205ENST00000530730 AAASQ9NRG9 546 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms