RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
USP35-207ENST00000530546 NPC1L1Q9UHC9 1359 aa15.21■□□□□ 0.03
USP35-207ENST00000530546 MORC1Q86VD1 984 aa15.2■□□□□ 0.02
USP35-207ENST00000530546 EVC2Q86UK5 1308 aa15.2■□□□□ 0.02
USP35-207ENST00000530546 MYO3AQ8NEV4 1616 aa15.19■□□□□ 0.02
USP35-207ENST00000530546 ZC3H13Q5T200 1668 aaKnown RBP15.19■□□□□ 0.02
USP35-207ENST00000530546 QRICH2Q9H0J4 1663 aa15.19■□□□□ 0.02
USP35-207ENST00000530546 ZMYM4Q5VZL5 1548 aa15.19■□□□□ 0.02
USP35-207ENST00000530546 USP35Q9P2H5 1018 aa15.19■□□□□ 0.02
USP35-207ENST00000530546 MINK1Q8N4C8 1332 aaPredicted RBP15.18■□□□□ 0.02
USP35-207ENST00000530546 PLIN1O60240 522 aa15.18■□□□□ 0.02
USP35-207ENST00000530546 SRPK2P78362 688 aaKnown RBP15.18■□□□□ 0.02
USP35-207ENST00000530546 POGKQ9P215 609 aa15.18■□□□□ 0.02
USP35-207ENST00000530546 PLEKHH1Q9ULM0 1364 aa15.17■□□□□ 0.02
USP35-207ENST00000530546 PREX1Q8TCU6 1659 aa15.17■□□□□ 0.02
USP35-207ENST00000530546 EXOC6Q8TAG9 804 aa15.17■□□□□ 0.02
USP35-207ENST00000530546 INSRP06213 1382 aa15.16■□□□□ 0.02
USP35-207ENST00000530546 PRAM1Q96QH2 718 aa15.16■□□□□ 0.02
USP35-207ENST00000530546 APAF1O14727 1248 aa15.16■□□□□ 0.02
USP35-207ENST00000530546 MYO5BQ9ULV0 1848 aa15.16■□□□□ 0.02
USP35-207ENST00000530546 ESF1Q9H501 851 aaKnown RBP15.15■□□□□ 0.02
USP35-207ENST00000530546 TMEM131LA2VDJ0 1609 aa15.14■□□□□ 0.01
USP35-207ENST00000530546 ZFYVE9O95405 1425 aa15.13■□□□□ 0.01
USP35-207ENST00000530546 TULP4Q9NRJ4 1543 aa15.12■□□□□ 0.01
USP35-207ENST00000530546 CGNL1Q0VF96 1302 aa15.12■□□□□ 0.01
USP35-207ENST00000530546 GOLGA2Q08379 1002 aa15.12■□□□□ 0.01
USP35-207ENST00000530546 CLTCQ00610 1675 aaKnown RBP15.11■□□□□ 0.01
USP35-207ENST00000530546 ARHGEF28Q8N1W1 1705 aaKnown RBP15.11■□□□□ 0.01
USP35-207ENST00000530546 MTHFSP49914 203 aa15.1■□□□□ 0.01
USP35-207ENST00000530546 PPP6R1Q9UPN7 881 aa15.1■□□□□ 0.01
USP35-207ENST00000530546 YTHDC2Q9H6S0 1430 aaKnown RBP15.1■□□□□ 0.01
USP35-207ENST00000530546 DUSP27Q5VZP5 1158 aa15.1■□□□□ 0.01
USP35-207ENST00000530546 RTN4Q9NQC3 1192 aaKnown RBP15.1■□□□□ 0.01
USP35-207ENST00000530546 NEUROD2Q15784 382 aa15.09■□□□□ 0.01
USP35-207ENST00000530546 AGLP35573 1532 aa15.09■□□□□ 0.01
USP35-207ENST00000530546 WAPLQ7Z5K2 1190 aa15.09■□□□□ 0.01
USP35-207ENST00000530546 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.09■□□□□ 0.01
USP35-207ENST00000530546 ANKRD36BQ8N2N9 1353 aa15.09■□□□□ 0.01
USP35-207ENST00000530546 ZNF521Q96K83 1311 aa15.08■□□□□ 0
USP35-207ENST00000530546 SPINK5Q9NQ38 1064 aaPredicted RBP15.08■□□□□ 0
USP35-207ENST00000530546 GGNBP2Q9H3C7 697 aa15.08■□□□□ 0
USP35-207ENST00000530546 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0
USP35-207ENST00000530546 PLPPR3Q6T4P5 718 aa15.07■□□□□ 0
USP35-207ENST00000530546 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
USP35-207ENST00000530546 PUS7Q96PZ0 661 aaKnown RBP15.07■□□□□ 0
USP35-207ENST00000530546 CRBNQ96SW2 442 aa15.07■□□□□ 0
USP35-207ENST00000530546 CDK19Q9BWU1 502 aa15.07■□□□□ 0
USP35-207ENST00000530546 RIMS2Q9UQ26 1411 aa15.07■□□□□ 0
USP35-207ENST00000530546 SLFN5Q08AF3 891 aa15.06■□□□□ 0
USP35-207ENST00000530546 PTPRMP28827 1452 aa15.06■□□□□ 0
USP35-207ENST00000530546 C20orf194Q5TEA3 1177 aa15.06■□□□□ 0
USP35-207ENST00000530546 DMRT2Q9Y5R5 561 aa15.06■□□□□ 0
USP35-207ENST00000530546 A2ML1A8K2U0 1454 aa15.06■□□□□ 0
USP35-207ENST00000530546 A0A1W2PP64 1363 aa15.06■□□□□ 0
USP35-207ENST00000530546 CFAP53Q96M91 514 aa15.06■□□□□ 0
USP35-207ENST00000530546 ALKQ9UM73 1620 aa15.05■□□□□ 0
USP35-207ENST00000530546 REREQ9P2R6 1566 aa15.05■□□□□ 0
USP35-207ENST00000530546 ZMYM3Q14202 1370 aa15.05■□□□□ 0
USP35-207ENST00000530546 PPM1GO15355 546 aaPredicted RBP15.04■□□□□ -0
USP35-207ENST00000530546 CABP1Q9NZU7 370 aa15.04■□□□□ -0
USP35-207ENST00000530546 KIF13AQ9H1H9 1805 aa15.04■□□□□ -0
USP35-207ENST00000530546 TERF2IPQ9NYB0 399 aa15.03■□□□□ -0
USP35-207ENST00000530546 NEFMP07197 916 aa15.03■□□□□ -0
USP35-207ENST00000530546 ARHGEF40Q8TER5 1519 aa15.03■□□□□ -0
USP35-207ENST00000530546 ATAD2Q6PL18 1390 aa15.02■□□□□ -0
USP35-207ENST00000530546 U2AF1L5P0DN76 240 aaPredicted RBP15.02■□□□□ -0
USP35-207ENST00000530546 U2AF1Q01081 240 aaKnown RBP eCLIP15.02■□□□□ -0
USP35-207ENST00000530546 SPATA31D1Q6ZQQ2 1576 aa15.02□□□□□ -0.01
USP35-207ENST00000530546 HDGFL2Q7Z4V5 671 aaPredicted RBP15.01□□□□□ -0.01
USP35-207ENST00000530546 TXNDC2Q86VQ3 553 aa15.01□□□□□ -0.01
USP35-207ENST00000530546 TCP11L2Q8N4U5 519 aa15.01□□□□□ -0.01
USP35-207ENST00000530546 RUNDC1Q96C34 613 aa15.01□□□□□ -0.01
USP35-207ENST00000530546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15□□□□□ -0.01
USP35-207ENST00000530546 E9PSI1 815 aa15□□□□□ -0.01
USP35-207ENST00000530546 U2SURPO15042 1029 aaKnown RBP15□□□□□ -0.01
USP35-207ENST00000530546 FYB1O15117 783 aa15□□□□□ -0.01
USP35-207ENST00000530546 WWC1Q8IX03 1113 aa15□□□□□ -0.01
USP35-207ENST00000530546 CEBPAP49715 358 aaPredicted RBP14.99□□□□□ -0.01
USP35-207ENST00000530546 ABCC11Q96J66 1382 aa14.99□□□□□ -0.01
USP35-207ENST00000530546 NSD2O96028 1365 aa14.99□□□□□ -0.01
USP35-207ENST00000530546 BCAR3O75815 825 aa14.98□□□□□ -0.01
USP35-207ENST00000530546 TRMT2AQ8IZ69 625 aaKnown RBP14.98□□□□□ -0.01
USP35-207ENST00000530546 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.98□□□□□ -0.01
USP35-207ENST00000530546 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
USP35-207ENST00000530546 METP08581 1390 aa14.98□□□□□ -0.01
USP35-207ENST00000530546 TNRQ92752 1358 aa14.98□□□□□ -0.01
USP35-207ENST00000530546 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.97□□□□□ -0.01
USP35-207ENST00000530546 FBLN1P23142 703 aa14.97□□□□□ -0.01
USP35-207ENST00000530546 USP32Q8NFA0 1604 aa14.96□□□□□ -0.01
USP35-207ENST00000530546 SKAP1Q86WV1 359 aa14.96□□□□□ -0.01
USP35-207ENST00000530546 NKTRP30414 1462 aaKnown RBP14.96□□□□□ -0.01
USP35-207ENST00000530546 SHPRHQ149N8 1683 aa14.95□□□□□ -0.02
USP35-207ENST00000530546 CD163L1Q9NR16 1453 aa14.95□□□□□ -0.02
USP35-207ENST00000530546 NGEFQ8N5V2 710 aa14.95□□□□□ -0.02
USP35-207ENST00000530546 NCKAP5LQ9HCH0 1330 aa14.95□□□□□ -0.02
USP35-207ENST00000530546 TCERG1O14776 1098 aaKnown RBP14.94□□□□□ -0.02
USP35-207ENST00000530546 HDGFP51858 240 aaKnown RBP14.94□□□□□ -0.02
USP35-207ENST00000530546 RSPH6AQ9H0K4 717 aa14.94□□□□□ -0.02
USP35-207ENST00000530546 GSE1Q14687 1217 aa14.94□□□□□ -0.02
USP35-207ENST00000530546 WASLO00401 505 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms