RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 SHPRHQ149N8 1683 aa22.59■■□□□ 1.21
CCDC90B-215ENST00000529745 BRINP3Q76B58 766 aa22.59■■□□□ 1.21
CCDC90B-215ENST00000529745 KIAA1210Q9ULL0 1709 aa22.59■■□□□ 1.21
CCDC90B-215ENST00000529745 C1orf167Q5SNV9 1468 aa22.58■■□□□ 1.2
CCDC90B-215ENST00000529745 CFAP70Q5T0N1 1121 aa22.57■■□□□ 1.2
CCDC90B-215ENST00000529745 TMEM132EQ6IEE7 984 aa22.57■■□□□ 1.2
CCDC90B-215ENST00000529745 FMN2Q9NZ56 1722 aa22.56■■□□□ 1.2
CCDC90B-215ENST00000529745 ZNF772Q68DY9 489 aaPredicted RBP22.55■■□□□ 1.2
CCDC90B-215ENST00000529745 DCAF11Q8TEB1 546 aa22.55■■□□□ 1.2
CCDC90B-215ENST00000529745 LRP6O75581 1613 aa22.54■■□□□ 1.2
CCDC90B-215ENST00000529745 STK26Q9P289 416 aa22.52■■□□□ 1.2
CCDC90B-215ENST00000529745 PLEKHH1Q9ULM0 1364 aa22.51■■□□□ 1.19
CCDC90B-215ENST00000529745 ADGRB2O60241 1585 aa22.51■■□□□ 1.19
CCDC90B-215ENST00000529745 TRIM26Q12899 539 aaPredicted RBP22.5■■□□□ 1.19
CCDC90B-215ENST00000529745 WAPLQ7Z5K2 1190 aa22.5■■□□□ 1.19
CCDC90B-215ENST00000529745 ARHGEF28Q8N1W1 1705 aaKnown RBP22.49■■□□□ 1.19
CCDC90B-215ENST00000529745 SPATA31A6Q5VVP1 1343 aa22.49■■□□□ 1.19
CCDC90B-215ENST00000529745 MEX3CQ5U5Q3 659 aaKnown RBP22.48■■□□□ 1.19
CCDC90B-215ENST00000529745 KDM2AQ9Y2K7 1162 aa22.48■■□□□ 1.19
CCDC90B-215ENST00000529745 CDK12Q9NYV4 1490 aaPredicted RBP22.47■■□□□ 1.19
CCDC90B-215ENST00000529745 RXRBP28702 533 aa22.47■■□□□ 1.19
CCDC90B-215ENST00000529745 KIF1AQ12756 1690 aa22.46■■□□□ 1.19
CCDC90B-215ENST00000529745 RGPD8O14715 1765 aaPredicted RBP22.45■■□□□ 1.18
CCDC90B-215ENST00000529745 ORAI2Q96SN7 254 aa22.42■■□□□ 1.18
CCDC90B-215ENST00000529745 SOS2Q07890 1332 aaPredicted RBP22.41■■□□□ 1.18
CCDC90B-215ENST00000529745 LRRC59Q96AG4 307 aaKnown RBP22.41■■□□□ 1.18
CCDC90B-215ENST00000529745 PRAM1Q96QH2 718 aa22.41■■□□□ 1.18
CCDC90B-215ENST00000529745 USP32Q8NFA0 1604 aa22.4■■□□□ 1.18
CCDC90B-215ENST00000529745 COL22A1Q8NFW1 1626 aaPredicted RBP22.39■■□□□ 1.18
CCDC90B-215ENST00000529745 PXDNQ92626 1479 aa22.38■■□□□ 1.17
CCDC90B-215ENST00000529745 ANKARQ7Z5J8 1434 aa22.38■■□□□ 1.17
CCDC90B-215ENST00000529745 TRPM1Q7Z4N2 1603 aa22.38■■□□□ 1.17
CCDC90B-215ENST00000529745 TRAK1Q9UPV9 953 aa22.37■■□□□ 1.17
CCDC90B-215ENST00000529745 PNPLA6Q8IY17 1366 aa22.37■■□□□ 1.17
CCDC90B-215ENST00000529745 NPHP3Q7Z494 1330 aa22.36■■□□□ 1.17
CCDC90B-215ENST00000529745 DDX17Q92841 729 aaKnown RBP22.36■■□□□ 1.17
CCDC90B-215ENST00000529745 POGKQ9P215 609 aa22.36■■□□□ 1.17
CCDC90B-215ENST00000529745 ESCO1Q5FWF5 840 aa22.35■■□□□ 1.17
CCDC90B-215ENST00000529745 L3MBTL2Q969R5 705 aa22.35■■□□□ 1.17
CCDC90B-215ENST00000529745 SIN3AQ96ST3 1273 aa22.35■■□□□ 1.17
CCDC90B-215ENST00000529745 TULP4Q9NRJ4 1543 aa22.33■■□□□ 1.17
CCDC90B-215ENST00000529745 EIF3AQ14152 1382 aaKnown RBP22.33■■□□□ 1.17
CCDC90B-215ENST00000529745 ITSN1Q15811 1721 aa22.32■■□□□ 1.16
CCDC90B-215ENST00000529745 RGS12O14924 1447 aa22.31■■□□□ 1.16
CCDC90B-215ENST00000529745 SAFB2Q14151 953 aaKnown RBP eCLIP22.3■■□□□ 1.16
CCDC90B-215ENST00000529745 AFF2P51816 1311 aa22.3■■□□□ 1.16
CCDC90B-215ENST00000529745 MARF1Q9Y4F3 1742 aaKnown RBP22.28■■□□□ 1.16
CCDC90B-215ENST00000529745 NUTM2FA1L443 756 aa22.28■■□□□ 1.16
CCDC90B-215ENST00000529745 NBPF1Q3BBV0 1214 aa22.28■■□□□ 1.16
CCDC90B-215ENST00000529745 FOXO3O43524 673 aa22.27■■□□□ 1.16
CCDC90B-215ENST00000529745 TOPAZ1Q8N9V7 1692 aa22.26■■□□□ 1.15
CCDC90B-215ENST00000529745 NUTM2BA6NNL0 878 aaPredicted RBP22.26■■□□□ 1.15
CCDC90B-215ENST00000529745 NUTM2EB1AL46 878 aaPredicted RBP22.26■■□□□ 1.15
CCDC90B-215ENST00000529745 WASLO00401 505 aaPredicted RBP22.26■■□□□ 1.15
CCDC90B-215ENST00000529745 NUTM2AQ8IVF1 878 aaPredicted RBP22.26■■□□□ 1.15
CCDC90B-215ENST00000529745 PHF8Q9UPP1 1060 aa22.26■■□□□ 1.15
CCDC90B-215ENST00000529745 QRICH2Q9H0J4 1663 aa22.26■■□□□ 1.15
CCDC90B-215ENST00000529745 MINK1Q8N4C8 1332 aaPredicted RBP22.26■■□□□ 1.15
CCDC90B-215ENST00000529745 NEUROD1Q13562 356 aa22.25■■□□□ 1.15
CCDC90B-215ENST00000529745 TRPM3Q9HCF6 1732 aaPredicted RBP22.25■■□□□ 1.15
CCDC90B-215ENST00000529745 ATP7BP35670 1465 aa22.24■■□□□ 1.15
CCDC90B-215ENST00000529745 ZRANB1Q9UGI0 708 aa22.24■■□□□ 1.15
CCDC90B-215ENST00000529745 RBM6P78332 1123 aaKnown RBP22.23■■□□□ 1.15
CCDC90B-215ENST00000529745 PRR36Q9H6K5 1346 aa22.23■■□□□ 1.15
CCDC90B-215ENST00000529745 HIRIP3Q9BW71 556 aaPredicted RBP22.22■■□□□ 1.15
CCDC90B-215ENST00000529745 SPATA31A3Q5VYP0 1347 aa22.22■■□□□ 1.15
CCDC90B-215ENST00000529745 GPRASP1Q5JY77 1395 aa22.22■■□□□ 1.15
CCDC90B-215ENST00000529745 EP400Q96L91 3159 aa22.22■■□□□ 1.15
CCDC90B-215ENST00000529745 QTRT2Q9H974 415 aaKnown RBP22.21■■□□□ 1.15
CCDC90B-215ENST00000529745 SBNO1A3KN83 1393 aa22.21■■□□□ 1.15
CCDC90B-215ENST00000529745 ALS2Q96Q42 1657 aa22.2■■□□□ 1.15
CCDC90B-215ENST00000529745 ABCA3Q99758 1704 aa22.2■■□□□ 1.14
CCDC90B-215ENST00000529745 TNS3Q68CZ2 1445 aa22.2■■□□□ 1.14
CCDC90B-215ENST00000529745 KRT28Q7Z3Y7 464 aa22.19■■□□□ 1.14
CCDC90B-215ENST00000529745 ATAD2Q6PL18 1390 aa22.18■■□□□ 1.14
CCDC90B-215ENST00000529745 CENPJQ9HC77 1338 aaPredicted RBP22.18■■□□□ 1.14
CCDC90B-215ENST00000529745 PSME1Q06323 249 aa22.18■■□□□ 1.14
CCDC90B-215ENST00000529745 TONSLQ96HA7 1378 aa22.17■■□□□ 1.14
CCDC90B-215ENST00000529745 XPCQ01831 940 aaPredicted RBP22.17■■□□□ 1.14
CCDC90B-215ENST00000529745 RALGAPBQ86X10 1494 aa22.16■■□□□ 1.14
CCDC90B-215ENST00000529745 ROCK2O75116 1388 aaKnown RBP22.16■■□□□ 1.14
CCDC90B-215ENST00000529745 NBPF8Q3BBV2 869 aa22.15■■□□□ 1.14
CCDC90B-215ENST00000529745 NUDT16Q96DE0 195 aaKnown RBP22.14■■□□□ 1.13
CCDC90B-215ENST00000529745 C8orf37Q96NL8 207 aa22.14■■□□□ 1.13
CCDC90B-215ENST00000529745 CDK19Q9BWU1 502 aa22.14■■□□□ 1.13
CCDC90B-215ENST00000529745 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.14■■□□□ 1.13
CCDC90B-215ENST00000529745 CRYBG1Q9Y4K1 1723 aa22.14■■□□□ 1.13
CCDC90B-215ENST00000529745 ARHGEF10O15013 1369 aa22.13■■□□□ 1.13
CCDC90B-215ENST00000529745 PMFBP1Q8TBY8 1022 aa22.13■■□□□ 1.13
CCDC90B-215ENST00000529745 POLR3AO14802 1390 aaPredicted RBP22.12■■□□□ 1.13
CCDC90B-215ENST00000529745 NGLY1Q96IV0 654 aa22.11■■□□□ 1.13
CCDC90B-215ENST00000529745 CLSPNQ9HAW4 1339 aa22.1■■□□□ 1.13
CCDC90B-215ENST00000529745 FNBP4Q8N3X1 1017 aaPredicted RBP22.1■■□□□ 1.13
CCDC90B-215ENST00000529745 CCDC61Q9Y6R9 512 aa22.1■■□□□ 1.13
CCDC90B-215ENST00000529745 SBNO2Q9Y2G9 1366 aa22.1■■□□□ 1.13
CCDC90B-215ENST00000529745 PLEKHG3A1L390 1219 aa22.08■■□□□ 1.13
CCDC90B-215ENST00000529745 ADAMTS2O95450 1211 aa22.08■■□□□ 1.13
CCDC90B-215ENST00000529745 NWD2Q9ULI1 1742 aa22.08■■□□□ 1.12
CCDC90B-215ENST00000529745 NGDNQ8NEJ9 315 aaKnown RBP22.06■■□□□ 1.12
CCDC90B-215ENST00000529745 SLIT2O94813 1529 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms