RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 WWC1Q8IX03 1113 aa19.02■□□□□ 0.64
USP35-203ENST00000529308 GSE1Q14687 1217 aa19.01■□□□□ 0.63
USP35-203ENST00000529308 C22orf23Q9BZE7 217 aa19.01■□□□□ 0.63
USP35-203ENST00000529308 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
USP35-203ENST00000529308 MSNP26038 577 aaKnown RBP19.01■□□□□ 0.63
USP35-203ENST00000529308 ANO2Q9NQ90 1003 aa19.01■□□□□ 0.63
USP35-203ENST00000529308 TWISTNBQ3B726 338 aaPredicted RBP19.01■□□□□ 0.63
USP35-203ENST00000529308 RBM33Q96EV2 1170 aaKnown RBP19.01■□□□□ 0.63
USP35-203ENST00000529308 CHMP4AQ9BY43 222 aa19.01■□□□□ 0.63
USP35-203ENST00000529308 ARID3AQ99856 593 aa19■□□□□ 0.63
USP35-203ENST00000529308 DDX49Q9Y6V7 483 aaKnown RBP19■□□□□ 0.63
USP35-203ENST00000529308 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
USP35-203ENST00000529308 NLRP2Q9NX02 1062 aa19■□□□□ 0.63
USP35-203ENST00000529308 BACH2Q9BYV9 841 aa18.99■□□□□ 0.63
USP35-203ENST00000529308 NFKBIBQ15653 356 aa18.99■□□□□ 0.63
USP35-203ENST00000529308 GPATCH3Q96I76 525 aa18.99■□□□□ 0.63
USP35-203ENST00000529308 CUL7Q14999 1698 aa18.99■□□□□ 0.63
USP35-203ENST00000529308 DRC7Q8IY82 874 aa18.98■□□□□ 0.63
USP35-203ENST00000529308 USP35Q9P2H5 1018 aa18.98■□□□□ 0.63
USP35-203ENST00000529308 GPATCH8Q9UKJ3 1502 aaKnown RBP18.98■□□□□ 0.63
USP35-203ENST00000529308 DCTN1Q14203 1278 aa18.98■□□□□ 0.63
USP35-203ENST00000529308 ESCO1Q5FWF5 840 aa18.98■□□□□ 0.63
USP35-203ENST00000529308 NSD3Q9BZ95 1437 aa18.98■□□□□ 0.63
USP35-203ENST00000529308 HSP90B1P14625 803 aaKnown RBP18.98■□□□□ 0.63
USP35-203ENST00000529308 SLFN5Q08AF3 891 aa18.98■□□□□ 0.63
USP35-203ENST00000529308 PDE3AQ14432 1141 aa18.97■□□□□ 0.63
USP35-203ENST00000529308 SYTL4Q96C24 671 aaPredicted RBP18.97■□□□□ 0.63
USP35-203ENST00000529308 ISY1Q9ULR0 285 aaKnown RBP18.97■□□□□ 0.63
USP35-203ENST00000529308 XPCQ01831 940 aaPredicted RBP18.96■□□□□ 0.63
USP35-203ENST00000529308 GNL2Q13823 731 aaKnown RBP18.96■□□□□ 0.63
USP35-203ENST00000529308 MIS18AQ9NYP9 233 aa18.96■□□□□ 0.63
USP35-203ENST00000529308 DISP3Q9P2K9 1392 aa18.96■□□□□ 0.63
USP35-203ENST00000529308 EVA1CP58658 441 aa18.95■□□□□ 0.62
USP35-203ENST00000529308 TTC5Q8N0Z6 440 aa18.95■□□□□ 0.62
USP35-203ENST00000529308 SLC4A2P04920 1241 aa18.95■□□□□ 0.62
USP35-203ENST00000529308 HDAC5Q9UQL6 1122 aa18.94■□□□□ 0.62
USP35-203ENST00000529308 FRAT2O75474 233 aaPredicted RBP18.94■□□□□ 0.62
USP35-203ENST00000529308 TOMM22Q9NS69 142 aa18.94■□□□□ 0.62
USP35-203ENST00000529308 TMPOP42166 694 aaKnown RBP18.93■□□□□ 0.62
USP35-203ENST00000529308 CEBPAP49715 358 aaPredicted RBP18.93■□□□□ 0.62
USP35-203ENST00000529308 ATF7IPQ6VMQ6 1270 aa18.93■□□□□ 0.62
USP35-203ENST00000529308 DIAPH3Q9NSV4 1193 aa18.93■□□□□ 0.62
USP35-203ENST00000529308 NEXNQ0ZGT2 675 aa18.92■□□□□ 0.62
USP35-203ENST00000529308 RAPGEF4Q8WZA2 1011 aa18.92■□□□□ 0.62
USP35-203ENST00000529308 GTF2E1P29083 439 aaPredicted RBP18.91■□□□□ 0.62
USP35-203ENST00000529308 CD109Q6YHK3 1445 aa18.91■□□□□ 0.62
USP35-203ENST00000529308 REC8O95072 547 aa18.9■□□□□ 0.62
USP35-203ENST00000529308 NME9Q86XW9 330 aa18.9■□□□□ 0.62
USP35-203ENST00000529308 EMILIN1Q9Y6C2 1016 aa18.9■□□□□ 0.62
USP35-203ENST00000529308 CCDC61Q9Y6R9 512 aa18.9■□□□□ 0.62
USP35-203ENST00000529308 ATP10BO94823 1461 aa18.9■□□□□ 0.62
USP35-203ENST00000529308 NUDT16Q96DE0 195 aaKnown RBP18.9■□□□□ 0.62
USP35-203ENST00000529308 NUP153P49790 1475 aaKnown RBP18.9■□□□□ 0.62
USP35-203ENST00000529308 RTEL1-TNFRSF6BF6WH68 1400 aa18.89■□□□□ 0.61
USP35-203ENST00000529308 IFIT2P09913 472 aaKnown RBP18.89■□□□□ 0.61
USP35-203ENST00000529308 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.89■□□□□ 0.61
USP35-203ENST00000529308 SURF6O75683 361 aaKnown RBP18.89■□□□□ 0.61
USP35-203ENST00000529308 WDR63Q8IWG1 891 aa18.89■□□□□ 0.61
USP35-203ENST00000529308 CHMP5Q9NZZ3 219 aa18.88■□□□□ 0.61
USP35-203ENST00000529308 UBTFL1P0CB47 393 aaPredicted RBP18.88■□□□□ 0.61
USP35-203ENST00000529308 SSH1Q8WYL5 1049 aa18.88■□□□□ 0.61
USP35-203ENST00000529308 MVPQ14764 893 aaKnown RBP18.88■□□□□ 0.61
USP35-203ENST00000529308 DUSP27Q5VZP5 1158 aa18.87■□□□□ 0.61
USP35-203ENST00000529308 MCM10Q7L590 875 aa18.87■□□□□ 0.61
USP35-203ENST00000529308 TMEM57Q8N5G2 664 aa18.87■□□□□ 0.61
USP35-203ENST00000529308 ADGRL1O94910 1474 aa18.87■□□□□ 0.61
USP35-203ENST00000529308 RIC3Q7Z5B4 369 aa18.86■□□□□ 0.61
USP35-203ENST00000529308 ATF3P18847 181 aa18.85■□□□□ 0.61
USP35-203ENST00000529308 RARSP54136 660 aaKnown RBP18.85■□□□□ 0.61
USP35-203ENST00000529308 PROSER2Q86WR7 435 aaPredicted RBP18.85■□□□□ 0.61
USP35-203ENST00000529308 DDX11L8A8MPP1 907 aa18.85■□□□□ 0.61
USP35-203ENST00000529308 G3BP1Q13283 466 aaKnown RBP eCLIP18.84■□□□□ 0.61
USP35-203ENST00000529308 HDGFL1Q5TGJ6 251 aa18.84■□□□□ 0.61
USP35-203ENST00000529308 RPGRIP1LQ68CZ1 1315 aa18.84■□□□□ 0.61
USP35-203ENST00000529308 CDK11BP21127 795 aaKnown RBP18.84■□□□□ 0.61
USP35-203ENST00000529308 INTS3Q68E01 1043 aaKnown RBP18.84■□□□□ 0.61
USP35-203ENST00000529308 SYAP1Q96A49 352 aaPredicted RBP18.83■□□□□ 0.6
USP35-203ENST00000529308 NOS1P29475 1434 aa18.83■□□□□ 0.6
USP35-203ENST00000529308 THEMISQ8N1K5 641 aaPredicted RBP18.82■□□□□ 0.6
USP35-203ENST00000529308 ZNF692Q9BU19 519 aaPredicted RBP18.82■□□□□ 0.6
USP35-203ENST00000529308 FCHSD2O94868 740 aa18.82■□□□□ 0.6
USP35-203ENST00000529308 NEUROD6Q96NK8 337 aa18.82■□□□□ 0.6
USP35-203ENST00000529308 UGGT2Q9NYU1 1516 aa18.82■□□□□ 0.6
USP35-203ENST00000529308 KIF14Q15058 1648 aa18.81■□□□□ 0.6
USP35-203ENST00000529308 DDX58O95786 925 aaKnown RBP18.81■□□□□ 0.6
USP35-203ENST00000529308 GAS2L2Q8NHY3 880 aa18.81■□□□□ 0.6
USP35-203ENST00000529308 CDC45O75419 566 aa18.81■□□□□ 0.6
USP35-203ENST00000529308 ZC3H6P61129 1189 aaKnown RBP18.81■□□□□ 0.6
USP35-203ENST00000529308 MCTP1Q6DN14 999 aa18.8■□□□□ 0.6
USP35-203ENST00000529308 ZKSCAN1P17029 563 aaPredicted RBP18.8■□□□□ 0.6
USP35-203ENST00000529308 NEK4P51957 841 aa18.8■□□□□ 0.6
USP35-203ENST00000529308 KIAA2012Q0VF49 1180 aa18.8■□□□□ 0.6
USP35-203ENST00000529308 CCDC30Q5VVM6 783 aa18.8■□□□□ 0.6
USP35-203ENST00000529308 TESK2Q96S53 571 aa18.8■□□□□ 0.6
USP35-203ENST00000529308 FOSBP53539 338 aa18.79■□□□□ 0.6
USP35-203ENST00000529308 ATAD2Q6PL18 1390 aa18.79■□□□□ 0.6
USP35-203ENST00000529308 VPS37CA5D8V6 355 aaPredicted RBP18.79■□□□□ 0.6
USP35-203ENST00000529308 USHBP1Q8N6Y0 703 aa18.79■□□□□ 0.6
USP35-203ENST00000529308 NFE2L2Q16236 605 aa18.79■□□□□ 0.6
USP35-203ENST00000529308 PTMSP20962 102 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms