RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 ROBO1Q9Y6N7 1651 aa21.59■■□□□ 1.05
LTBP3-209ENST00000527792 ABCC11Q96J66 1382 aa21.59■■□□□ 1.05
LTBP3-209ENST00000527792 NKTRP30414 1462 aaKnown RBP21.58■■□□□ 1.05
LTBP3-209ENST00000527792 ST20-MTHFSA0A0A6YYL1 179 aa21.58■■□□□ 1.05
LTBP3-209ENST00000527792 SAFB2Q14151 953 aaKnown RBP eCLIP21.57■■□□□ 1.04
LTBP3-209ENST00000527792 CHD2O14647 1828 aaKnown RBP21.57■■□□□ 1.04
LTBP3-209ENST00000527792 KNDC1Q76NI1 1749 aa21.56■■□□□ 1.04
LTBP3-209ENST00000527792 C14orf37Q86TY3 774 aa21.56■■□□□ 1.04
LTBP3-209ENST00000527792 PRAM1Q96QH2 718 aa21.56■■□□□ 1.04
LTBP3-209ENST00000527792 CENPJQ9HC77 1338 aaPredicted RBP21.55■■□□□ 1.04
LTBP3-209ENST00000527792 ARHGEF28Q8N1W1 1705 aaKnown RBP21.55■■□□□ 1.04
LTBP3-209ENST00000527792 WAPLQ7Z5K2 1190 aa21.55■■□□□ 1.04
LTBP3-209ENST00000527792 DLC1Q96QB1 1528 aa21.55■■□□□ 1.04
LTBP3-209ENST00000527792 JCADQ9P266 1359 aa21.54■■□□□ 1.04
LTBP3-209ENST00000527792 NWD1Q149M9 1564 aa21.53■■□□□ 1.04
LTBP3-209ENST00000527792 XRN1Q8IZH2 1706 aaKnown RBP21.53■■□□□ 1.04
LTBP3-209ENST00000527792 SIRT1Q96EB6 747 aa21.53■■□□□ 1.04
LTBP3-209ENST00000527792 TECPR2O15040 1411 aa21.53■■□□□ 1.04
LTBP3-209ENST00000527792 ROBO2Q9HCK4 1378 aa21.52■■□□□ 1.04
LTBP3-209ENST00000527792 C19orf44Q9H6X5 657 aa21.51■■□□□ 1.03
LTBP3-209ENST00000527792 PLEKHH1Q9ULM0 1364 aa21.5■■□□□ 1.03
LTBP3-209ENST00000527792 QRICH2Q9H0J4 1663 aa21.5■■□□□ 1.03
LTBP3-209ENST00000527792 PTCH1Q13635 1447 aa21.49■■□□□ 1.03
LTBP3-209ENST00000527792 NCOA3Q9Y6Q9 1424 aa21.49■■□□□ 1.03
LTBP3-209ENST00000527792 ATF3P18847 181 aa21.49■■□□□ 1.03
LTBP3-209ENST00000527792 CADPS2Q86UW7 1296 aa21.49■■□□□ 1.03
LTBP3-209ENST00000527792 MINK1Q8N4C8 1332 aaPredicted RBP21.49■■□□□ 1.03
LTBP3-209ENST00000527792 PHLPP1O60346 1717 aa21.46■■□□□ 1.03
LTBP3-209ENST00000527792 ZNF316A6NFI3 1004 aaPredicted RBP21.45■■□□□ 1.02
LTBP3-209ENST00000527792 TMF1P82094 1093 aa21.45■■□□□ 1.02
LTBP3-209ENST00000527792 MEX3CQ5U5Q3 659 aaKnown RBP21.45■■□□□ 1.02
LTBP3-209ENST00000527792 SPATA31A6Q5VVP1 1343 aa21.45■■□□□ 1.02
LTBP3-209ENST00000527792 SLC24A1O60721 1099 aa21.44■■□□□ 1.02
LTBP3-209ENST00000527792 TESK2Q96S53 571 aa21.44■■□□□ 1.02
LTBP3-209ENST00000527792 POLR3GLQ9BT43 218 aa21.44■■□□□ 1.02
LTBP3-209ENST00000527792 EVC2Q86UK5 1308 aa21.41■■□□□ 1.02
LTBP3-209ENST00000527792 ZNF772Q68DY9 489 aaPredicted RBP21.41■■□□□ 1.02
LTBP3-209ENST00000527792 SBNO2Q9Y2G9 1366 aa21.4■■□□□ 1.02
LTBP3-209ENST00000527792 BRINP3Q76B58 766 aa21.4■■□□□ 1.02
LTBP3-209ENST00000527792 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.4■■□□□ 1.02
LTBP3-209ENST00000527792 NUTM2BA6NNL0 878 aaPredicted RBP21.38■■□□□ 1.01
LTBP3-209ENST00000527792 NUTM2EB1AL46 878 aaPredicted RBP21.38■■□□□ 1.01
LTBP3-209ENST00000527792 SRPK2P78362 688 aaKnown RBP21.38■■□□□ 1.01
LTBP3-209ENST00000527792 NUTM2AQ8IVF1 878 aaPredicted RBP21.38■■□□□ 1.01
LTBP3-209ENST00000527792 LRP6O75581 1613 aa21.37■■□□□ 1.01
LTBP3-209ENST00000527792 COL16A1Q07092 1604 aaPredicted RBP21.37■■□□□ 1.01
LTBP3-209ENST00000527792 C11orf95C9JLR9 678 aaPredicted RBP21.37■■□□□ 1.01
LTBP3-209ENST00000527792 CDCA8Q53HL2 280 aa21.37■■□□□ 1.01
LTBP3-209ENST00000527792 CDK19Q9BWU1 502 aa21.37■■□□□ 1.01
LTBP3-209ENST00000527792 WASLO00401 505 aaPredicted RBP21.36■■□□□ 1.01
LTBP3-209ENST00000527792 CABP2Q9NPB3 220 aa21.35■■□□□ 1.01
LTBP3-209ENST00000527792 ADGRL3Q9HAR2 1447 aa21.35■■□□□ 1.01
LTBP3-209ENST00000527792 NALCNQ8IZF0 1738 aa21.35■■□□□ 1.01
LTBP3-209ENST00000527792 TULP4Q9NRJ4 1543 aa21.34■■□□□ 1.01
LTBP3-209ENST00000527792 RXRBP28702 533 aa21.34■■□□□ 1.01
LTBP3-209ENST00000527792 UPF1Q92900 1129 aaKnown RBP eCLIP21.34■■□□□ 1.01
LTBP3-209ENST00000527792 KIF7Q2M1P5 1343 aa21.33■■□□□ 1.01
LTBP3-209ENST00000527792 NUTM2FA1L443 756 aa21.33■■□□□ 1.01
LTBP3-209ENST00000527792 ADGRB2O60241 1585 aa21.32■■□□□ 1
LTBP3-209ENST00000527792 CCDC7Q96M83 1385 aa21.32■■□□□ 1
LTBP3-209ENST00000527792 WASHC2AQ641Q2 1341 aa21.31■■□□□ 1
LTBP3-209ENST00000527792 AHDC1Q5TGY3 1603 aaPredicted RBP21.31■■□□□ 1
LTBP3-209ENST00000527792 LRRC59Q96AG4 307 aaKnown RBP21.29■■□□□ 1
LTBP3-209ENST00000527792 CDC42BPGQ6DT37 1551 aa21.28■■□□□ 1
LTBP3-209ENST00000527792 TMC1Q8TDI8 760 aa21.28■■□□□ 1
LTBP3-209ENST00000527792 DDX17Q92841 729 aaKnown RBP21.28■■□□□ 1
LTBP3-209ENST00000527792 NUDT16Q96DE0 195 aaKnown RBP21.27■■□□□ 1
LTBP3-209ENST00000527792 PUS7Q96PZ0 661 aaKnown RBP21.27■■□□□ 1
LTBP3-209ENST00000527792 DCCP43146 1447 aa21.27■■□□□ 1
LTBP3-209ENST00000527792 AFF2P51816 1311 aa21.27■□□□□ 0.99
LTBP3-209ENST00000527792 ATAD2Q6PL18 1390 aa21.26■□□□□ 0.99
LTBP3-209ENST00000527792 FMN2Q9NZ56 1722 aa21.25■□□□□ 0.99
LTBP3-209ENST00000527792 MST1RQ04912 1400 aa21.24■□□□□ 0.99
LTBP3-209ENST00000527792 SHPRHQ149N8 1683 aa21.23■□□□□ 0.99
LTBP3-209ENST00000527792 PRR36Q9H6K5 1346 aa21.23■□□□□ 0.99
LTBP3-209ENST00000527792 DDX10Q13206 875 aaKnown RBP21.22■□□□□ 0.99
LTBP3-209ENST00000527792 C8orf37Q96NL8 207 aa21.22■□□□□ 0.99
LTBP3-209ENST00000527792 QTRT2Q9H974 415 aaKnown RBP21.22■□□□□ 0.99
LTBP3-209ENST00000527792 CCDC61Q9Y6R9 512 aa21.22■□□□□ 0.99
LTBP3-209ENST00000527792 SLC12A5Q9H2X9 1139 aa21.21■□□□□ 0.99
LTBP3-209ENST00000527792 ANKARQ7Z5J8 1434 aa21.21■□□□□ 0.99
LTBP3-209ENST00000527792 ATP7BP35670 1465 aa21.2■□□□□ 0.98
LTBP3-209ENST00000527792 CABP1Q9NZU7 370 aa21.2■□□□□ 0.98
LTBP3-209ENST00000527792 PPIP5K1Q6PFW1 1433 aa21.2■□□□□ 0.98
LTBP3-209ENST00000527792 ESCO1Q5FWF5 840 aa21.19■□□□□ 0.98
LTBP3-209ENST00000527792 USP32Q8NFA0 1604 aa21.18■□□□□ 0.98
LTBP3-209ENST00000527792 RGPD8O14715 1765 aaPredicted RBP21.18■□□□□ 0.98
LTBP3-209ENST00000527792 RBM6P78332 1123 aaKnown RBP21.17■□□□□ 0.98
LTBP3-209ENST00000527792 PMFBP1Q8TBY8 1022 aa21.17■□□□□ 0.98
LTBP3-209ENST00000527792 NINLQ9Y2I6 1382 aa21.17■□□□□ 0.98
LTBP3-209ENST00000527792 ITSN1Q15811 1721 aa21.17■□□□□ 0.98
LTBP3-209ENST00000527792 MYOM1P52179 1685 aa21.16■□□□□ 0.98
LTBP3-209ENST00000527792 C1orf167Q5SNV9 1468 aa21.16■□□□□ 0.98
LTBP3-209ENST00000527792 PNPLA6Q8IY17 1366 aa21.16■□□□□ 0.98
LTBP3-209ENST00000527792 ADAMTS2O95450 1211 aa21.16■□□□□ 0.98
LTBP3-209ENST00000527792 NGLY1Q96IV0 654 aa21.16■□□□□ 0.98
LTBP3-209ENST00000527792 CDK12Q9NYV4 1490 aaPredicted RBP21.15■□□□□ 0.98
LTBP3-209ENST00000527792 HDGFL2Q7Z4V5 671 aaPredicted RBP21.15■□□□□ 0.98
LTBP3-209ENST00000527792 ORAI2Q96SN7 254 aa21.15■□□□□ 0.98
LTBP3-209ENST00000527792 PANK3Q9H999 370 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms