RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 ADGRL3Q9HAR2 1447 aa23.28■■□□□ 1.32
CAPN1-205ENST00000526954 ST20-MTHFSA0A0A6YYL1 179 aa23.28■■□□□ 1.32
CAPN1-205ENST00000526954 RBM33Q96EV2 1170 aaKnown RBP23.27■■□□□ 1.32
CAPN1-205ENST00000526954 ADGRB2O60241 1585 aa23.27■■□□□ 1.32
CAPN1-205ENST00000526954 HSPA5P11021 654 aaKnown RBP23.26■■□□□ 1.31
CAPN1-205ENST00000526954 SAFB2Q14151 953 aaKnown RBP eCLIP23.26■■□□□ 1.31
CAPN1-205ENST00000526954 TESK2Q96S53 571 aa23.24■■□□□ 1.31
CAPN1-205ENST00000526954 C19orf44Q9H6X5 657 aa23.24■■□□□ 1.31
CAPN1-205ENST00000526954 IQSEC2Q5JU85 1478 aa23.24■■□□□ 1.31
CAPN1-205ENST00000526954 SLC24A1O60721 1099 aa23.23■■□□□ 1.31
CAPN1-205ENST00000526954 MINK1Q8N4C8 1332 aaPredicted RBP23.23■■□□□ 1.31
CAPN1-205ENST00000526954 C14orf37Q86TY3 774 aa23.22■■□□□ 1.31
CAPN1-205ENST00000526954 DCCP43146 1447 aa23.22■■□□□ 1.31
CAPN1-205ENST00000526954 CDC42BPGQ6DT37 1551 aa23.22■■□□□ 1.31
CAPN1-205ENST00000526954 MSH6P52701 1360 aa23.21■■□□□ 1.31
CAPN1-205ENST00000526954 HIRIP3Q9BW71 556 aaPredicted RBP23.19■■□□□ 1.3
CAPN1-205ENST00000526954 CERKQ8TCT0 537 aa23.18■■□□□ 1.3
CAPN1-205ENST00000526954 TULP4Q9NRJ4 1543 aa23.18■■□□□ 1.3
CAPN1-205ENST00000526954 FMN2Q9NZ56 1722 aa23.17■■□□□ 1.3
CAPN1-205ENST00000526954 WASLO00401 505 aaPredicted RBP23.17■■□□□ 1.3
CAPN1-205ENST00000526954 EVC2Q86UK5 1308 aa23.16■■□□□ 1.3
CAPN1-205ENST00000526954 CADPS2Q86UW7 1296 aa23.15■■□□□ 1.3
CAPN1-205ENST00000526954 ATF3P18847 181 aa23.14■■□□□ 1.29
CAPN1-205ENST00000526954 TMF1P82094 1093 aa23.14■■□□□ 1.29
CAPN1-205ENST00000526954 CDK19Q9BWU1 502 aa23.14■■□□□ 1.29
CAPN1-205ENST00000526954 PUS7Q96PZ0 661 aaKnown RBP23.12■■□□□ 1.29
CAPN1-205ENST00000526954 DISP3Q9P2K9 1392 aa23.11■■□□□ 1.29
CAPN1-205ENST00000526954 MST1RQ04912 1400 aa23.1■■□□□ 1.29
CAPN1-205ENST00000526954 ANKARQ7Z5J8 1434 aa23.1■■□□□ 1.29
CAPN1-205ENST00000526954 USP32Q8NFA0 1604 aa23.1■■□□□ 1.29
CAPN1-205ENST00000526954 RGPD8O14715 1765 aaPredicted RBP23.09■■□□□ 1.29
CAPN1-205ENST00000526954 SRPK2P78362 688 aaKnown RBP23.08■■□□□ 1.29
CAPN1-205ENST00000526954 CDCA8Q53HL2 280 aa23.08■■□□□ 1.29
CAPN1-205ENST00000526954 CABP2Q9NPB3 220 aa23.07■■□□□ 1.28
CAPN1-205ENST00000526954 ATP7BP35670 1465 aa23.06■■□□□ 1.28
CAPN1-205ENST00000526954 C1orf167Q5SNV9 1468 aa23.06■■□□□ 1.28
CAPN1-205ENST00000526954 ITSN1Q15811 1721 aa23.06■■□□□ 1.28
CAPN1-205ENST00000526954 SLAIN2Q9P270 581 aa23.06■■□□□ 1.28
CAPN1-205ENST00000526954 PRR36Q9H6K5 1346 aa23.06■■□□□ 1.28
CAPN1-205ENST00000526954 ATAD2Q6PL18 1390 aa23.05■■□□□ 1.28
CAPN1-205ENST00000526954 C11orf95C9JLR9 678 aaPredicted RBP23.05■■□□□ 1.28
CAPN1-205ENST00000526954 TOM1O60784 492 aa23.05■■□□□ 1.28
CAPN1-205ENST00000526954 NUDT16Q96DE0 195 aaKnown RBP23.05■■□□□ 1.28
CAPN1-205ENST00000526954 TOPAZ1Q8N9V7 1692 aa23.05■■□□□ 1.28
CAPN1-205ENST00000526954 NUTM2FA1L443 756 aa23.03■■□□□ 1.28
CAPN1-205ENST00000526954 CCDC61Q9Y6R9 512 aa23.03■■□□□ 1.28
CAPN1-205ENST00000526954 KIF7Q2M1P5 1343 aa23■■□□□ 1.27
CAPN1-205ENST00000526954 UBAP1LF5GYI3 381 aa22.99■■□□□ 1.27
CAPN1-205ENST00000526954 KIF1AQ12756 1690 aa22.98■■□□□ 1.27
CAPN1-205ENST00000526954 PLEKHG3A1L390 1219 aa22.98■■□□□ 1.27
CAPN1-205ENST00000526954 CCDC7Q96M83 1385 aa22.98■■□□□ 1.27
CAPN1-205ENST00000526954 NINLQ9Y2I6 1382 aa22.98■■□□□ 1.27
CAPN1-205ENST00000526954 PPIP5K1Q6PFW1 1433 aa22.98■■□□□ 1.27
CAPN1-205ENST00000526954 ESCO1Q5FWF5 840 aa22.97■■□□□ 1.27
CAPN1-205ENST00000526954 ORAI2Q96SN7 254 aa22.97■■□□□ 1.27
CAPN1-205ENST00000526954 WASHC2AQ641Q2 1341 aa22.97■■□□□ 1.27
CAPN1-205ENST00000526954 MYOM1P52179 1685 aa22.97■■□□□ 1.27
CAPN1-205ENST00000526954 BRINP3Q76B58 766 aa22.96■■□□□ 1.27
CAPN1-205ENST00000526954 PHF8Q9UPP1 1060 aa22.96■■□□□ 1.27
CAPN1-205ENST00000526954 CABP1Q9NZU7 370 aa22.95■■□□□ 1.26
CAPN1-205ENST00000526954 ROBO1Q9Y6N7 1651 aa22.95■■□□□ 1.26
CAPN1-205ENST00000526954 POLR3AO14802 1390 aaPredicted RBP22.93■■□□□ 1.26
CAPN1-205ENST00000526954 ZNF316A6NFI3 1004 aaPredicted RBP22.93■■□□□ 1.26
CAPN1-205ENST00000526954 SLC12A5Q9H2X9 1139 aa22.92■■□□□ 1.26
CAPN1-205ENST00000526954 AKAP12Q02952 1782 aa22.91■■□□□ 1.26
CAPN1-205ENST00000526954 PMFBP1Q8TBY8 1022 aa22.91■■□□□ 1.26
CAPN1-205ENST00000526954 TMC1Q8TDI8 760 aa22.91■■□□□ 1.26
CAPN1-205ENST00000526954 POLR3GLQ9BT43 218 aa22.91■■□□□ 1.26
CAPN1-205ENST00000526954 NHSL1Q5SYE7 1610 aa22.9■■□□□ 1.26
CAPN1-205ENST00000526954 CD163L1Q9NR16 1453 aa22.9■■□□□ 1.26
CAPN1-205ENST00000526954 CPSF1Q10570 1443 aaKnown RBP22.9■■□□□ 1.26
CAPN1-205ENST00000526954 ACEP12821 1306 aa22.89■■□□□ 1.26
CAPN1-205ENST00000526954 PIP4K2BP78356 416 aa22.89■■□□□ 1.25
CAPN1-205ENST00000526954 NGDNQ8NEJ9 315 aaKnown RBP22.88■■□□□ 1.25
CAPN1-205ENST00000526954 AHDC1Q5TGY3 1603 aaPredicted RBP22.87■■□□□ 1.25
CAPN1-205ENST00000526954 ZNF692Q9BU19 519 aaPredicted RBP22.87■■□□□ 1.25
CAPN1-205ENST00000526954 TERF2IPQ9NYB0 399 aa22.87■■□□□ 1.25
CAPN1-205ENST00000526954 ANKRD36BQ8N2N9 1353 aa22.87■■□□□ 1.25
CAPN1-205ENST00000526954 NPHP3Q7Z494 1330 aa22.86■■□□□ 1.25
CAPN1-205ENST00000526954 FOXO3O43524 673 aa22.86■■□□□ 1.25
CAPN1-205ENST00000526954 MON2Q7Z3U7 1717 aa22.85■■□□□ 1.25
CAPN1-205ENST00000526954 HDGFL2Q7Z4V5 671 aaPredicted RBP22.85■■□□□ 1.25
CAPN1-205ENST00000526954 A0A1W2PP64 1363 aa22.84■■□□□ 1.25
CAPN1-205ENST00000526954 SCAF1Q9H7N4 1312 aaKnown RBP22.83■■□□□ 1.25
CAPN1-205ENST00000526954 PSME1Q06323 249 aa22.83■■□□□ 1.25
CAPN1-205ENST00000526954 BRD4O60885 1362 aaPredicted RBP22.83■■□□□ 1.25
CAPN1-205ENST00000526954 SOS2Q07890 1332 aaPredicted RBP22.82■■□□□ 1.24
CAPN1-205ENST00000526954 USP6P35125 1406 aa22.82■■□□□ 1.24
CAPN1-205ENST00000526954 PXDNQ92626 1479 aa22.82■■□□□ 1.24
CAPN1-205ENST00000526954 KTN1Q86UP2 1357 aaKnown RBP22.81■■□□□ 1.24
CAPN1-205ENST00000526954 KRT28Q7Z3Y7 464 aa22.81■■□□□ 1.24
CAPN1-205ENST00000526954 DDX17Q92841 729 aaKnown RBP22.81■■□□□ 1.24
CAPN1-205ENST00000526954 PANK3Q9H999 370 aa22.81■■□□□ 1.24
CAPN1-205ENST00000526954 PHLPP1O60346 1717 aa22.81■■□□□ 1.24
CAPN1-205ENST00000526954 TRPM3Q9HCF6 1732 aaPredicted RBP22.81■■□□□ 1.24
CAPN1-205ENST00000526954 SSH2Q76I76 1423 aa22.81■■□□□ 1.24
CAPN1-205ENST00000526954 NRKQ7Z2Y5 1582 aa22.8■■□□□ 1.24
CAPN1-205ENST00000526954 FBXO41Q8TF61 875 aa22.79■■□□□ 1.24
CAPN1-205ENST00000526954 SBNO1A3KN83 1393 aa22.78■■□□□ 1.24
CAPN1-205ENST00000526954 EDC4Q6P2E9 1401 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 203 ms