RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 GPBP1L1Q9HC44 474 aaPredicted RBP13.04□□□□□ -0.32
COPB1-204ENST00000526191 USB1Q9BQ65 265 aaKnown RBP13.03□□□□□ -0.32
COPB1-204ENST00000526191 V9GY48 417 aaPredicted RBP13.03□□□□□ -0.32
COPB1-204ENST00000526191 TPRNQ4KMQ1 711 aa13.01□□□□□ -0.33
COPB1-204ENST00000526191 FCF1Q9Y324 198 aaKnown RBP13.01□□□□□ -0.33
COPB1-204ENST00000526191 LIAT1Q6ZQX7 453 aa13□□□□□ -0.33
COPB1-204ENST00000526191 SLC19A1P41440 591 aa12.99□□□□□ -0.33
COPB1-204ENST00000526191 RSBN1LQ6PCB5 846 aaPredicted RBP12.98□□□□□ -0.33
COPB1-204ENST00000526191 IRX2Q9BZI1 471 aaPredicted RBP12.98□□□□□ -0.33
COPB1-204ENST00000526191 KDM4CQ9H3R0 1056 aa12.98□□□□□ -0.33
COPB1-204ENST00000526191 C6orf229H3BNL8 230 aa12.97□□□□□ -0.33
COPB1-204ENST00000526191 MMP16P51512 607 aa12.97□□□□□ -0.33
COPB1-204ENST00000526191 DIXDC1Q155Q3 683 aa12.97□□□□□ -0.33
COPB1-204ENST00000526191 RETREG3Q86VR2 466 aa12.96□□□□□ -0.33
COPB1-204ENST00000526191 PCDHB15Q9Y5E8 787 aa12.96□□□□□ -0.33
COPB1-204ENST00000526191 DXOO77932 396 aaKnown RBP12.95□□□□□ -0.34
COPB1-204ENST00000526191 SPTLC1O15269 473 aa12.94□□□□□ -0.34
COPB1-204ENST00000526191 MYSM1Q5VVJ2 828 aa12.94□□□□□ -0.34
COPB1-204ENST00000526191 SPRYD7Q5W111 196 aa12.93□□□□□ -0.34
COPB1-204ENST00000526191 RIC3Q7Z5B4 369 aa12.93□□□□□ -0.34
COPB1-204ENST00000526191 LIMD1Q9UGP4 676 aa12.93□□□□□ -0.34
COPB1-204ENST00000526191 JUNDP17535 347 aa12.92□□□□□ -0.34
COPB1-204ENST00000526191 FAM117AQ9C073 453 aa12.92□□□□□ -0.34
COPB1-204ENST00000526191 GJA5P36382 358 aa12.91□□□□□ -0.34
COPB1-204ENST00000526191 CSPP1Q1MSJ5 1256 aa12.91□□□□□ -0.34
COPB1-204ENST00000526191 MTMR2Q13614 643 aa12.9□□□□□ -0.34
COPB1-204ENST00000526191 ZNF598Q86UK7 904 aaKnown RBP12.89□□□□□ -0.35
COPB1-204ENST00000526191 CABLES1Q8TDN4 633 aa12.89□□□□□ -0.35
COPB1-204ENST00000526191 ZNF697Q5TEC3 545 aa12.88□□□□□ -0.35
COPB1-204ENST00000526191 CCDC24Q8N4L8 307 aa12.88□□□□□ -0.35
COPB1-204ENST00000526191 PRR7Q8TB68 274 aa12.88□□□□□ -0.35
COPB1-204ENST00000526191 GFRA3O60609 400 aa12.87□□□□□ -0.35
COPB1-204ENST00000526191 HRCP23327 699 aa12.87□□□□□ -0.35
COPB1-204ENST00000526191 TRIM67Q6ZTA4 783 aa12.87□□□□□ -0.35
COPB1-204ENST00000526191 POLR3EQ9NVU0 708 aa12.87□□□□□ -0.35
COPB1-204ENST00000526191 PLEKHG3A1L390 1219 aa12.86□□□□□ -0.35
COPB1-204ENST00000526191 RPIAP49247 311 aa12.86□□□□□ -0.35
COPB1-204ENST00000526191 NEUROD2Q15784 382 aa12.86□□□□□ -0.35
COPB1-204ENST00000526191 CLK2P49760 499 aaKnown RBP12.85□□□□□ -0.35
COPB1-204ENST00000526191 QPCTQ16769 361 aa12.85□□□□□ -0.35
COPB1-204ENST00000526191 ZBTB3Q9H5J0 574 aa12.85□□□□□ -0.35
COPB1-204ENST00000526191 SPDYE5A6NIY4 337 aa12.84□□□□□ -0.35
COPB1-204ENST00000526191 DDRGK1Q96HY6 314 aa12.84□□□□□ -0.35
COPB1-204ENST00000526191 RSPH6AQ9H0K4 717 aa12.84□□□□□ -0.35
COPB1-204ENST00000526191 CFAP99D6REC4 459 aa12.83□□□□□ -0.36
COPB1-204ENST00000526191 NUDT12Q9BQG2 462 aa12.83□□□□□ -0.36
COPB1-204ENST00000526191 PDZRN3Q9UPQ7 1066 aa12.83□□□□□ -0.36
COPB1-204ENST00000526191 ZBTB24O43167 697 aaPredicted RBP12.82□□□□□ -0.36
COPB1-204ENST00000526191 PRKCSHP14314 528 aaPredicted RBP12.82□□□□□ -0.36
COPB1-204ENST00000526191 PRPF38BQ5VTL8 546 aaKnown RBP12.82□□□□□ -0.36
COPB1-204ENST00000526191 BRPF1P55201 1214 aaPredicted RBP12.81□□□□□ -0.36
COPB1-204ENST00000526191 TUSC1Q2TAM9 212 aa12.81□□□□□ -0.36
COPB1-204ENST00000526191 TNFRSF10AO00220 468 aa12.8□□□□□ -0.36
COPB1-204ENST00000526191 LILRB3O75022 631 aa12.8□□□□□ -0.36
COPB1-204ENST00000526191 TRIM32Q13049 653 aa12.8□□□□□ -0.36
COPB1-204ENST00000526191 GDF9O60383 454 aa12.79□□□□□ -0.36
COPB1-204ENST00000526191 CD2BP2O95400 341 aaKnown RBP12.79□□□□□ -0.36
COPB1-204ENST00000526191 SH3D19Q5HYK7 790 aa12.79□□□□□ -0.36
COPB1-204ENST00000526191 PTCRAQ6ISU1 281 aaPredicted RBP12.79□□□□□ -0.36
COPB1-204ENST00000526191 NUTM2BA6NNL0 878 aaPredicted RBP12.78□□□□□ -0.36
COPB1-204ENST00000526191 NUTM2EB1AL46 878 aaPredicted RBP12.78□□□□□ -0.36
COPB1-204ENST00000526191 NRG2O14511 850 aaPredicted RBP12.78□□□□□ -0.36
COPB1-204ENST00000526191 FOXC1Q12948 553 aa12.78□□□□□ -0.36
COPB1-204ENST00000526191 LAPTM4AQ15012 233 aa12.78□□□□□ -0.36
COPB1-204ENST00000526191 PTPRNQ16849 979 aa12.78□□□□□ -0.36
COPB1-204ENST00000526191 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
COPB1-204ENST00000526191 NUTM2DQ5VT03 806 aaPredicted RBP12.78□□□□□ -0.36
COPB1-204ENST00000526191 DESI1Q6ICB0 168 aa12.78□□□□□ -0.36
COPB1-204ENST00000526191 NUTM2AQ8IVF1 878 aaPredicted RBP12.78□□□□□ -0.36
COPB1-204ENST00000526191 PKD2L1Q9P0L9 805 aa12.78□□□□□ -0.36
COPB1-204ENST00000526191 CCNYL3P0C7X3 344 aa12.77□□□□□ -0.37
COPB1-204ENST00000526191 SKIV2LQ15477 1246 aaKnown RBP12.77□□□□□ -0.37
COPB1-204ENST00000526191 PROCA1Q8NCQ7 364 aaPredicted RBP12.77□□□□□ -0.37
COPB1-204ENST00000526191 Q6ZNB5 142 aa12.76□□□□□ -0.37
COPB1-204ENST00000526191 PRR20EP86478 221 aa12.75□□□□□ -0.37
COPB1-204ENST00000526191 PRR20CP86479 221 aa12.75□□□□□ -0.37
COPB1-204ENST00000526191 PRR20DP86480 221 aa12.75□□□□□ -0.37
COPB1-204ENST00000526191 PRR20BP86481 221 aa12.75□□□□□ -0.37
COPB1-204ENST00000526191 PRR20AP86496 221 aa12.75□□□□□ -0.37
COPB1-204ENST00000526191 FBXO31Q5XUX0 539 aaPredicted RBP12.75□□□□□ -0.37
COPB1-204ENST00000526191 TSC1Q92574 1164 aa12.75□□□□□ -0.37
COPB1-204ENST00000526191 LYPD8Q6UX82 237 aa12.74□□□□□ -0.37
COPB1-204ENST00000526191 IL27Q8NEV9 243 aa12.73□□□□□ -0.37
COPB1-204ENST00000526191 EVA1BQ9NVM1 165 aa12.73□□□□□ -0.37
COPB1-204ENST00000526191 PER1O15534 1290 aaPredicted RBP12.72□□□□□ -0.37
COPB1-204ENST00000526191 SKOR1P84550 965 aa12.72□□□□□ -0.37
COPB1-204ENST00000526191 KCNH2Q12809 1159 aa12.71□□□□□ -0.37
COPB1-204ENST00000526191 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.71□□□□□ -0.37
COPB1-204ENST00000526191 ATP1B4Q9UN42 357 aaPredicted RBP12.71□□□□□ -0.37
COPB1-204ENST00000526191 LCE2BO14633 110 aa12.7□□□□□ -0.38
COPB1-204ENST00000526191 UNC93B1Q9H1C4 597 aa12.7□□□□□ -0.38
COPB1-204ENST00000526191 CTHP32929 405 aa12.69□□□□□ -0.38
COPB1-204ENST00000526191 MAP10Q9P2G4 905 aa12.69□□□□□ -0.38
COPB1-204ENST00000526191 WNT7AO00755 349 aa12.67□□□□□ -0.38
COPB1-204ENST00000526191 F12P00748 615 aaPredicted RBP12.67□□□□□ -0.38
COPB1-204ENST00000526191 LINC01559Q495D7 138 aa12.67□□□□□ -0.38
COPB1-204ENST00000526191 WNT7BP56706 349 aa12.66□□□□□ -0.38
COPB1-204ENST00000526191 HELBQ8NG08 1087 aaPredicted RBP12.66□□□□□ -0.38
COPB1-204ENST00000526191 FAM187AA6NFU0 413 aa12.65□□□□□ -0.38
COPB1-204ENST00000526191 RC3H1Q5TC82 1133 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms