RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 TRAK1Q9UPV9 953 aa28.47■■■□□ 2.15
EXOSC4-202ENST00000525936 CLSPNQ9HAW4 1339 aa28.46■■■□□ 2.15
EXOSC4-202ENST00000525936 CDC42BPGQ6DT37 1551 aa28.45■■■□□ 2.15
EXOSC4-202ENST00000525936 BRINP3Q76B58 766 aa28.44■■■□□ 2.14
EXOSC4-202ENST00000525936 C1orf167Q5SNV9 1468 aa28.42■■■□□ 2.14
EXOSC4-202ENST00000525936 TONSLQ96HA7 1378 aa28.42■■■□□ 2.14
EXOSC4-202ENST00000525936 NBPF8Q3BBV2 869 aa28.41■■■□□ 2.14
EXOSC4-202ENST00000525936 POGKQ9P215 609 aa28.4■■■□□ 2.14
EXOSC4-202ENST00000525936 TRPM1Q7Z4N2 1603 aa28.39■■■□□ 2.13
EXOSC4-202ENST00000525936 SAFB2Q14151 953 aaKnown RBP eCLIP28.37■■■□□ 2.13
EXOSC4-202ENST00000525936 ARHGEF28Q8N1W1 1705 aaKnown RBP28.37■■■□□ 2.13
EXOSC4-202ENST00000525936 AHDC1Q5TGY3 1603 aaPredicted RBP28.36■■■□□ 2.13
EXOSC4-202ENST00000525936 ORAI2Q96SN7 254 aa28.34■■■□□ 2.13
EXOSC4-202ENST00000525936 ADGRB2O60241 1585 aa28.33■■■□□ 2.13
EXOSC4-202ENST00000525936 GPRASP1Q5JY77 1395 aa28.32■■■□□ 2.12
EXOSC4-202ENST00000525936 FMN2Q9NZ56 1722 aa28.32■■■□□ 2.12
EXOSC4-202ENST00000525936 TIMELESSQ9UNS1 1208 aa28.31■■■□□ 2.12
EXOSC4-202ENST00000525936 PHLPP1O60346 1717 aa28.31■■■□□ 2.12
EXOSC4-202ENST00000525936 COL16A1Q07092 1604 aaPredicted RBP28.3■■■□□ 2.12
EXOSC4-202ENST00000525936 NHSL1Q5SYE7 1610 aa28.29■■■□□ 2.12
EXOSC4-202ENST00000525936 ROCK2O75116 1388 aaKnown RBP28.28■■■□□ 2.12
EXOSC4-202ENST00000525936 MINK1Q8N4C8 1332 aaPredicted RBP28.28■■■□□ 2.12
EXOSC4-202ENST00000525936 HIRIP3Q9BW71 556 aaPredicted RBP28.27■■■□□ 2.12
EXOSC4-202ENST00000525936 ESCO1Q5FWF5 840 aa28.26■■■□□ 2.11
EXOSC4-202ENST00000525936 CCER1Q8TC90 406 aaPredicted RBP28.26■■■□□ 2.11
EXOSC4-202ENST00000525936 NUTM2FA1L443 756 aa28.25■■■□□ 2.11
EXOSC4-202ENST00000525936 WASLO00401 505 aaPredicted RBP28.25■■■□□ 2.11
EXOSC4-202ENST00000525936 RALGAPBQ86X10 1494 aa28.25■■■□□ 2.11
EXOSC4-202ENST00000525936 DDX17Q92841 729 aaKnown RBP28.24■■■□□ 2.11
EXOSC4-202ENST00000525936 CENPJQ9HC77 1338 aaPredicted RBP28.22■■■□□ 2.11
EXOSC4-202ENST00000525936 ANKARQ7Z5J8 1434 aa28.22■■■□□ 2.11
EXOSC4-202ENST00000525936 SOS2Q07890 1332 aaPredicted RBP28.21■■■□□ 2.11
EXOSC4-202ENST00000525936 JCADQ9P266 1359 aa28.21■■■□□ 2.11
EXOSC4-202ENST00000525936 USP32Q8NFA0 1604 aa28.21■■■□□ 2.11
EXOSC4-202ENST00000525936 RGPD8O14715 1765 aaPredicted RBP28.19■■■□□ 2.1
EXOSC4-202ENST00000525936 EIF3AQ14152 1382 aaKnown RBP28.18■■■□□ 2.1
EXOSC4-202ENST00000525936 TULP4Q9NRJ4 1543 aa28.18■■■□□ 2.1
EXOSC4-202ENST00000525936 PRR36Q9H6K5 1346 aa28.18■■■□□ 2.1
EXOSC4-202ENST00000525936 FOXO3O43524 673 aa28.17■■■□□ 2.1
EXOSC4-202ENST00000525936 LRRC59Q96AG4 307 aaKnown RBP28.17■■■□□ 2.1
EXOSC4-202ENST00000525936 CARD11Q9BXL7 1154 aa28.17■■■□□ 2.1
EXOSC4-202ENST00000525936 NPHP3Q7Z494 1330 aa28.17■■■□□ 2.1
EXOSC4-202ENST00000525936 CDK19Q9BWU1 502 aa28.16■■■□□ 2.1
EXOSC4-202ENST00000525936 PHF8Q9UPP1 1060 aa28.15■■■□□ 2.1
EXOSC4-202ENST00000525936 PXDNQ92626 1479 aa28.15■■■□□ 2.1
EXOSC4-202ENST00000525936 KIF1AQ12756 1690 aa28.14■■■□□ 2.1
EXOSC4-202ENST00000525936 MED1Q15648 1581 aaPredicted RBP28.13■■■□□ 2.09
EXOSC4-202ENST00000525936 SHPRHQ149N8 1683 aa28.13■■■□□ 2.09
EXOSC4-202ENST00000525936 QRICH2Q9H0J4 1663 aa28.13■■■□□ 2.09
EXOSC4-202ENST00000525936 ATP7BP35670 1465 aa28.11■■■□□ 2.09
EXOSC4-202ENST00000525936 NUDT16Q96DE0 195 aaKnown RBP28.11■■■□□ 2.09
EXOSC4-202ENST00000525936 SPATA31A6Q5VVP1 1343 aa28.1■■■□□ 2.09
EXOSC4-202ENST00000525936 SBNO2Q9Y2G9 1366 aa28.08■■■□□ 2.09
EXOSC4-202ENST00000525936 PNPLA6Q8IY17 1366 aa28.07■■■□□ 2.08
EXOSC4-202ENST00000525936 PMFBP1Q8TBY8 1022 aa28.06■■■□□ 2.08
EXOSC4-202ENST00000525936 XPCQ01831 940 aaPredicted RBP28.05■■■□□ 2.08
EXOSC4-202ENST00000525936 KRT28Q7Z3Y7 464 aa28.05■■■□□ 2.08
EXOSC4-202ENST00000525936 CCDC61Q9Y6R9 512 aa28.05■■■□□ 2.08
EXOSC4-202ENST00000525936 DISP3Q9P2K9 1392 aa28.04■■■□□ 2.08
EXOSC4-202ENST00000525936 EVC2Q86UK5 1308 aa28.02■■■□□ 2.08
EXOSC4-202ENST00000525936 PLEKHG3A1L390 1219 aa28.02■■■□□ 2.08
EXOSC4-202ENST00000525936 CABP2Q9NPB3 220 aa28.02■■■□□ 2.08
EXOSC4-202ENST00000525936 ITSN1Q15811 1721 aa28.01■■■□□ 2.07
EXOSC4-202ENST00000525936 TOPAZ1Q8N9V7 1692 aa28.01■■■□□ 2.07
EXOSC4-202ENST00000525936 SPATA31A3Q5VYP0 1347 aa28.01■■■□□ 2.07
EXOSC4-202ENST00000525936 LRP6O75581 1613 aa28.01■■■□□ 2.07
EXOSC4-202ENST00000525936 SRPK2P78362 688 aaKnown RBP28.01■■■□□ 2.07
EXOSC4-202ENST00000525936 PSME1Q06323 249 aa28.01■■■□□ 2.07
EXOSC4-202ENST00000525936 SBNO1A3KN83 1393 aa27.99■■■□□ 2.07
EXOSC4-202ENST00000525936 POLR3AO14802 1390 aaPredicted RBP27.99■■■□□ 2.07
EXOSC4-202ENST00000525936 COL22A1Q8NFW1 1626 aaPredicted RBP27.98■■■□□ 2.07
EXOSC4-202ENST00000525936 ST20-MTHFSA0A0A6YYL1 179 aa27.97■■■□□ 2.07
EXOSC4-202ENST00000525936 TESK2Q96S53 571 aa27.97■■■□□ 2.07
EXOSC4-202ENST00000525936 NGDNQ8NEJ9 315 aaKnown RBP27.96■■■□□ 2.07
EXOSC4-202ENST00000525936 RGS17Q9UGC6 210 aaPredicted RBP27.94■■■□□ 2.06
EXOSC4-202ENST00000525936 ACEP12821 1306 aa27.93■■■□□ 2.06
EXOSC4-202ENST00000525936 TNS3Q68CZ2 1445 aa27.93■■■□□ 2.06
EXOSC4-202ENST00000525936 PPIP5K1Q6PFW1 1433 aa27.93■■■□□ 2.06
EXOSC4-202ENST00000525936 TRPM3Q9HCF6 1732 aaPredicted RBP27.93■■■□□ 2.06
EXOSC4-202ENST00000525936 USP47Q96K76 1375 aa27.93■■■□□ 2.06
EXOSC4-202ENST00000525936 NUTM2BA6NNL0 878 aaPredicted RBP27.91■■■□□ 2.06
EXOSC4-202ENST00000525936 NUTM2EB1AL46 878 aaPredicted RBP27.91■■■□□ 2.06
EXOSC4-202ENST00000525936 NUTM2AQ8IVF1 878 aaPredicted RBP27.91■■■□□ 2.06
EXOSC4-202ENST00000525936 PUS7Q96PZ0 661 aaKnown RBP27.91■■■□□ 2.06
EXOSC4-202ENST00000525936 CABP1Q9NZU7 370 aa27.91■■■□□ 2.06
EXOSC4-202ENST00000525936 SLC24A1O60721 1099 aa27.9■■■□□ 2.06
EXOSC4-202ENST00000525936 PHF23Q9BUL5 403 aaPredicted RBP27.88■■■□□ 2.05
EXOSC4-202ENST00000525936 ARHGEF10O15013 1369 aa27.87■■■□□ 2.05
EXOSC4-202ENST00000525936 ATAD2Q6PL18 1390 aa27.87■■■□□ 2.05
EXOSC4-202ENST00000525936 ALS2Q96Q42 1657 aa27.87■■■□□ 2.05
EXOSC4-202ENST00000525936 MEX3CQ5U5Q3 659 aaKnown RBP27.84■■■□□ 2.05
EXOSC4-202ENST00000525936 BRD4O60885 1362 aaPredicted RBP27.82■■■□□ 2.04
EXOSC4-202ENST00000525936 ADAMTS2O95450 1211 aa27.8■■■□□ 2.04
EXOSC4-202ENST00000525936 LMOD2Q6P5Q4 547 aa27.8■■■□□ 2.04
EXOSC4-202ENST00000525936 ILDR2Q71H61 639 aa27.8■■■□□ 2.04
EXOSC4-202ENST00000525936 CPSF1Q10570 1443 aaKnown RBP27.8■■■□□ 2.04
EXOSC4-202ENST00000525936 SSH2Q76I76 1423 aa27.8■■■□□ 2.04
EXOSC4-202ENST00000525936 PAK3O75914 559 aaPredicted RBP27.79■■■□□ 2.04
EXOSC4-202ENST00000525936 ZNF692Q9BU19 519 aaPredicted RBP27.79■■■□□ 2.04
EXOSC4-202ENST00000525936 USP6P35125 1406 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms