RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 DCAF8L1A6NGE4 600 aa17.27■□□□□ 0.36
CDC27-202ENST00000525495 MED1Q15648 1581 aaPredicted RBP17.26■□□□□ 0.35
CDC27-202ENST00000525495 BRINP3Q76B58 766 aa17.26■□□□□ 0.35
CDC27-202ENST00000525495 SIN3AQ96ST3 1273 aa17.26■□□□□ 0.35
CDC27-202ENST00000525495 COL16A1Q07092 1604 aaPredicted RBP17.26■□□□□ 0.35
CDC27-202ENST00000525495 DISP3Q9P2K9 1392 aa17.26■□□□□ 0.35
CDC27-202ENST00000525495 STAC3Q96MF2 364 aa17.25■□□□□ 0.35
CDC27-202ENST00000525495 AHDC1Q5TGY3 1603 aaPredicted RBP17.25■□□□□ 0.35
CDC27-202ENST00000525495 CDC42BPGQ6DT37 1551 aa17.24■□□□□ 0.35
CDC27-202ENST00000525495 C1orf167Q5SNV9 1468 aa17.23■□□□□ 0.35
CDC27-202ENST00000525495 NHSL1Q5SYE7 1610 aa17.22■□□□□ 0.35
CDC27-202ENST00000525495 DLC1Q96QB1 1528 aa17.21■□□□□ 0.35
CDC27-202ENST00000525495 SIRT1Q96EB6 747 aa17.21■□□□□ 0.35
CDC27-202ENST00000525495 KIAA1210Q9ULL0 1709 aa17.2■□□□□ 0.34
CDC27-202ENST00000525495 NEUROD1Q13562 356 aa17.19■□□□□ 0.34
CDC27-202ENST00000525495 L3MBTL2Q969R5 705 aa17.19■□□□□ 0.34
CDC27-202ENST00000525495 PRAM1Q96QH2 718 aa17.19■□□□□ 0.34
CDC27-202ENST00000525495 TRAK1Q9UPV9 953 aa17.19■□□□□ 0.34
CDC27-202ENST00000525495 FMN2Q9NZ56 1722 aa17.19■□□□□ 0.34
CDC27-202ENST00000525495 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
CDC27-202ENST00000525495 DDX17Q92841 729 aaKnown RBP17.18■□□□□ 0.34
CDC27-202ENST00000525495 ORAI2Q96SN7 254 aa17.18■□□□□ 0.34
CDC27-202ENST00000525495 SAFB2Q14151 953 aaKnown RBP eCLIP17.18■□□□□ 0.34
CDC27-202ENST00000525495 ARHGEF28Q8N1W1 1705 aaKnown RBP17.17■□□□□ 0.34
CDC27-202ENST00000525495 JCADQ9P266 1359 aa17.16■□□□□ 0.34
CDC27-202ENST00000525495 NUTM2FA1L443 756 aa17.16■□□□□ 0.34
CDC27-202ENST00000525495 NBPF1Q3BBV0 1214 aa17.15■□□□□ 0.34
CDC27-202ENST00000525495 RGPD8O14715 1765 aaPredicted RBP17.15■□□□□ 0.34
CDC27-202ENST00000525495 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
CDC27-202ENST00000525495 POGKQ9P215 609 aa17.14■□□□□ 0.33
CDC27-202ENST00000525495 ADGRB2O60241 1585 aa17.14■□□□□ 0.33
CDC27-202ENST00000525495 ILDR2Q71H61 639 aa17.13■□□□□ 0.33
CDC27-202ENST00000525495 ESCO1Q5FWF5 840 aa17.12■□□□□ 0.33
CDC27-202ENST00000525495 TRPM1Q7Z4N2 1603 aa17.12■□□□□ 0.33
CDC27-202ENST00000525495 USP32Q8NFA0 1604 aa17.11■□□□□ 0.33
CDC27-202ENST00000525495 HIRIP3Q9BW71 556 aaPredicted RBP17.11■□□□□ 0.33
CDC27-202ENST00000525495 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
CDC27-202ENST00000525495 MINK1Q8N4C8 1332 aaPredicted RBP17.1■□□□□ 0.33
CDC27-202ENST00000525495 LRP6O75581 1613 aa17.1■□□□□ 0.33
CDC27-202ENST00000525495 PCGF6Q9BYE7 350 aa17.1■□□□□ 0.33
CDC27-202ENST00000525495 RNF39Q9H2S5 420 aa17.1■□□□□ 0.33
CDC27-202ENST00000525495 SOS2Q07890 1332 aaPredicted RBP17.09■□□□□ 0.33
CDC27-202ENST00000525495 PXDNQ92626 1479 aa17.08■□□□□ 0.32
CDC27-202ENST00000525495 LRRC59Q96AG4 307 aaKnown RBP17.08■□□□□ 0.32
CDC27-202ENST00000525495 KIF1AQ12756 1690 aa17.07■□□□□ 0.32
CDC27-202ENST00000525495 FOXO3O43524 673 aa17.07■□□□□ 0.32
CDC27-202ENST00000525495 RGS17Q9UGC6 210 aaPredicted RBP17.07■□□□□ 0.32
CDC27-202ENST00000525495 SPATA31A6Q5VVP1 1343 aa17.07■□□□□ 0.32
CDC27-202ENST00000525495 PNPLA6Q8IY17 1366 aa17.06■□□□□ 0.32
CDC27-202ENST00000525495 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
CDC27-202ENST00000525495 NPHP3Q7Z494 1330 aa17.06■□□□□ 0.32
CDC27-202ENST00000525495 XPCQ01831 940 aaPredicted RBP17.05■□□□□ 0.32
CDC27-202ENST00000525495 ANKARQ7Z5J8 1434 aa17.05■□□□□ 0.32
CDC27-202ENST00000525495 PRR36Q9H6K5 1346 aa17.04■□□□□ 0.32
CDC27-202ENST00000525495 TULP4Q9NRJ4 1543 aa17.04■□□□□ 0.32
CDC27-202ENST00000525495 TONSLQ96HA7 1378 aa17.04■□□□□ 0.32
CDC27-202ENST00000525495 WASLO00401 505 aaPredicted RBP17.04■□□□□ 0.32
CDC27-202ENST00000525495 PHF8Q9UPP1 1060 aa17.03■□□□□ 0.32
CDC27-202ENST00000525495 QRICH2Q9H0J4 1663 aa17.02■□□□□ 0.32
CDC27-202ENST00000525495 NUTM2BA6NNL0 878 aaPredicted RBP17.02■□□□□ 0.32
CDC27-202ENST00000525495 NUTM2EB1AL46 878 aaPredicted RBP17.02■□□□□ 0.32
CDC27-202ENST00000525495 NUTM2AQ8IVF1 878 aaPredicted RBP17.02■□□□□ 0.32
CDC27-202ENST00000525495 ROCK2O75116 1388 aaKnown RBP17.02■□□□□ 0.31
CDC27-202ENST00000525495 COL22A1Q8NFW1 1626 aaPredicted RBP17.01■□□□□ 0.31
CDC27-202ENST00000525495 ATP7BP35670 1465 aa17.01■□□□□ 0.31
CDC27-202ENST00000525495 PMFBP1Q8TBY8 1022 aa17■□□□□ 0.31
CDC27-202ENST00000525495 CENPJQ9HC77 1338 aaPredicted RBP16.99■□□□□ 0.31
CDC27-202ENST00000525495 EIF3AQ14152 1382 aaKnown RBP16.99■□□□□ 0.31
CDC27-202ENST00000525495 CDK19Q9BWU1 502 aa16.99■□□□□ 0.31
CDC27-202ENST00000525495 GPRASP1Q5JY77 1395 aa16.98■□□□□ 0.31
CDC27-202ENST00000525495 ITSN1Q15811 1721 aa16.98■□□□□ 0.31
CDC27-202ENST00000525495 KRT28Q7Z3Y7 464 aa16.98■□□□□ 0.31
CDC27-202ENST00000525495 TOPAZ1Q8N9V7 1692 aa16.97■□□□□ 0.31
CDC27-202ENST00000525495 RALGAPBQ86X10 1494 aa16.97■□□□□ 0.31
CDC27-202ENST00000525495 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
CDC27-202ENST00000525495 POTEAQ6S8J7 498 aa16.97■□□□□ 0.31
CDC27-202ENST00000525495 SPATA31A3Q5VYP0 1347 aa16.96■□□□□ 0.31
CDC27-202ENST00000525495 NUDT16Q96DE0 195 aaKnown RBP16.96■□□□□ 0.31
CDC27-202ENST00000525495 TRPM3Q9HCF6 1732 aaPredicted RBP16.96■□□□□ 0.31
CDC27-202ENST00000525495 TNS3Q68CZ2 1445 aa16.94■□□□□ 0.3
CDC27-202ENST00000525495 ADAMTS2O95450 1211 aa16.93■□□□□ 0.3
CDC27-202ENST00000525495 PSME1Q06323 249 aa16.93■□□□□ 0.3
CDC27-202ENST00000525495 SBNO1A3KN83 1393 aa16.92■□□□□ 0.3
CDC27-202ENST00000525495 MARF1Q9Y4F3 1742 aaKnown RBP16.92■□□□□ 0.3
CDC27-202ENST00000525495 ALS2Q96Q42 1657 aa16.92■□□□□ 0.3
CDC27-202ENST00000525495 C8orf37Q96NL8 207 aa16.92■□□□□ 0.3
CDC27-202ENST00000525495 CARD11Q9BXL7 1154 aa16.92■□□□□ 0.3
CDC27-202ENST00000525495 AFF2P51816 1311 aa16.91■□□□□ 0.3
CDC27-202ENST00000525495 CLSPNQ9HAW4 1339 aa16.91■□□□□ 0.3
CDC27-202ENST00000525495 CABP2Q9NPB3 220 aa16.91■□□□□ 0.3
CDC27-202ENST00000525495 SRPK2P78362 688 aaKnown RBP16.9■□□□□ 0.3
CDC27-202ENST00000525495 NGDNQ8NEJ9 315 aaKnown RBP16.9■□□□□ 0.3
CDC27-202ENST00000525495 ABCA3Q99758 1704 aa16.9■□□□□ 0.3
CDC27-202ENST00000525495 CCDC61Q9Y6R9 512 aa16.9■□□□□ 0.3
CDC27-202ENST00000525495 SOCS7O14512 581 aa16.89■□□□□ 0.29
CDC27-202ENST00000525495 POLR3AO14802 1390 aaPredicted RBP16.88■□□□□ 0.29
CDC27-202ENST00000525495 ACEP12821 1306 aa16.88■□□□□ 0.29
CDC27-202ENST00000525495 PPIP5K1Q6PFW1 1433 aa16.88■□□□□ 0.29
CDC27-202ENST00000525495 PLEKHG3A1L390 1219 aa16.87■□□□□ 0.29
CDC27-202ENST00000525495 ZNF772Q68DY9 489 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms