RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CDC42BPGQ6DT37 1551 aa7.7□□□□□ -1.18
HMGB1P40-201ENST00000525121 EIF3AQ14152 1382 aaKnown RBP7.7□□□□□ -1.18
HMGB1P40-201ENST00000525121 NALCNQ8IZF0 1738 aa7.69□□□□□ -1.18
HMGB1P40-201ENST00000525121 SAFB2Q14151 953 aaKnown RBP eCLIP7.69□□□□□ -1.18
HMGB1P40-201ENST00000525121 MST1RQ04912 1400 aa7.69□□□□□ -1.18
HMGB1P40-201ENST00000525121 ROBO1Q9Y6N7 1651 aa7.68□□□□□ -1.18
HMGB1P40-201ENST00000525121 HSPA1LP34931 641 aa7.68□□□□□ -1.18
HMGB1P40-201ENST00000525121 TIMELESSQ9UNS1 1208 aa7.68□□□□□ -1.18
HMGB1P40-201ENST00000525121 PLEKHH1Q9ULM0 1364 aa7.68□□□□□ -1.18
HMGB1P40-201ENST00000525121 BRINP3Q76B58 766 aa7.67□□□□□ -1.18
HMGB1P40-201ENST00000525121 MINK1Q8N4C8 1332 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P40-201ENST00000525121 C1orf167Q5SNV9 1468 aa7.67□□□□□ -1.18
HMGB1P40-201ENST00000525121 NBPF1Q3BBV0 1214 aa7.66□□□□□ -1.18
HMGB1P40-201ENST00000525121 ESCO1Q5FWF5 840 aa7.66□□□□□ -1.18
HMGB1P40-201ENST00000525121 CARD11Q9BXL7 1154 aa7.66□□□□□ -1.18
HMGB1P40-201ENST00000525121 CENPJQ9HC77 1338 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P40-201ENST00000525121 RALGAPBQ86X10 1494 aa7.66□□□□□ -1.18
HMGB1P40-201ENST00000525121 TRPM1Q7Z4N2 1603 aa7.66□□□□□ -1.18
HMGB1P40-201ENST00000525121 NUTM2FA1L443 756 aa7.65□□□□□ -1.18
HMGB1P40-201ENST00000525121 ADGRB2O60241 1585 aa7.65□□□□□ -1.18
HMGB1P40-201ENST00000525121 ANKARQ7Z5J8 1434 aa7.65□□□□□ -1.18
HMGB1P40-201ENST00000525121 HIRIP3Q9BW71 556 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P40-201ENST00000525121 ARHGEF28Q8N1W1 1705 aaKnown RBP7.64□□□□□ -1.19
HMGB1P40-201ENST00000525121 AHDC1Q5TGY3 1603 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P40-201ENST00000525121 GPRASP1Q5JY77 1395 aa7.64□□□□□ -1.19
HMGB1P40-201ENST00000525121 NPHP3Q7Z494 1330 aa7.64□□□□□ -1.19
HMGB1P40-201ENST00000525121 WASLO00401 505 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P40-201ENST00000525121 NBPF8Q3BBV2 869 aa7.64□□□□□ -1.19
HMGB1P40-201ENST00000525121 PHLPP1O60346 1717 aa7.64□□□□□ -1.19
HMGB1P40-201ENST00000525121 JCADQ9P266 1359 aa7.63□□□□□ -1.19
HMGB1P40-201ENST00000525121 SRPK2P78362 688 aaKnown RBP7.63□□□□□ -1.19
HMGB1P40-201ENST00000525121 ORAI2Q96SN7 254 aa7.63□□□□□ -1.19
HMGB1P40-201ENST00000525121 FMN2Q9NZ56 1722 aa7.63□□□□□ -1.19
HMGB1P40-201ENST00000525121 TULP4Q9NRJ4 1543 aa7.62□□□□□ -1.19
HMGB1P40-201ENST00000525121 EVC2Q86UK5 1308 aa7.62□□□□□ -1.19
HMGB1P40-201ENST00000525121 SLC24A1O60721 1099 aa7.62□□□□□ -1.19
HMGB1P40-201ENST00000525121 LRRC59Q96AG4 307 aaKnown RBP7.62□□□□□ -1.19
HMGB1P40-201ENST00000525121 PHF8Q9UPP1 1060 aa7.62□□□□□ -1.19
HMGB1P40-201ENST00000525121 KIF1AQ12756 1690 aa7.62□□□□□ -1.19
HMGB1P40-201ENST00000525121 COL16A1Q07092 1604 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P40-201ENST00000525121 FOXO3O43524 673 aa7.61□□□□□ -1.19
HMGB1P40-201ENST00000525121 PSME1Q06323 249 aa7.61□□□□□ -1.19
HMGB1P40-201ENST00000525121 NGDNQ8NEJ9 315 aaKnown RBP7.61□□□□□ -1.19
HMGB1P40-201ENST00000525121 PHF23Q9BUL5 403 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P40-201ENST00000525121 CDK19Q9BWU1 502 aa7.61□□□□□ -1.19
HMGB1P40-201ENST00000525121 QRICH2Q9H0J4 1663 aa7.6□□□□□ -1.19
HMGB1P40-201ENST00000525121 NHSL1Q5SYE7 1610 aa7.6□□□□□ -1.19
HMGB1P40-201ENST00000525121 SPATA31A6Q5VVP1 1343 aa7.6□□□□□ -1.19
HMGB1P40-201ENST00000525121 MEX3CQ5U5Q3 659 aaKnown RBP7.6□□□□□ -1.19
HMGB1P40-201ENST00000525121 NUDT16Q96DE0 195 aaKnown RBP7.6□□□□□ -1.19
HMGB1P40-201ENST00000525121 DISP3Q9P2K9 1392 aa7.59□□□□□ -1.19
HMGB1P40-201ENST00000525121 SBNO2Q9Y2G9 1366 aa7.59□□□□□ -1.19
HMGB1P40-201ENST00000525121 SOS2Q07890 1332 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P40-201ENST00000525121 XPCQ01831 940 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P40-201ENST00000525121 PMFBP1Q8TBY8 1022 aa7.59□□□□□ -1.19
HMGB1P40-201ENST00000525121 DDX17Q92841 729 aaKnown RBP7.59□□□□□ -1.19
HMGB1P40-201ENST00000525121 CCDC61Q9Y6R9 512 aa7.59□□□□□ -1.19
HMGB1P40-201ENST00000525121 ATP7BP35670 1465 aa7.59□□□□□ -1.19
HMGB1P40-201ENST00000525121 MED1Q15648 1581 aaPredicted RBP7.59□□□□□ -1.2
HMGB1P40-201ENST00000525121 ATAD2Q6PL18 1390 aa7.59□□□□□ -1.2
HMGB1P40-201ENST00000525121 USP47Q96K76 1375 aa7.59□□□□□ -1.2
HMGB1P40-201ENST00000525121 ITSN1Q15811 1721 aa7.58□□□□□ -1.2
HMGB1P40-201ENST00000525121 HAP1P54257 671 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P40-201ENST00000525121 LMOD2Q6P5Q4 547 aa7.58□□□□□ -1.2
HMGB1P40-201ENST00000525121 KRT28Q7Z3Y7 464 aa7.58□□□□□ -1.2
HMGB1P40-201ENST00000525121 CABP2Q9NPB3 220 aa7.58□□□□□ -1.2
HMGB1P40-201ENST00000525121 ARHGEF10O15013 1369 aa7.58□□□□□ -1.2
HMGB1P40-201ENST00000525121 PNPLA6Q8IY17 1366 aa7.58□□□□□ -1.2
HMGB1P40-201ENST00000525121 SHPRHQ149N8 1683 aa7.57□□□□□ -1.2
HMGB1P40-201ENST00000525121 PRR36Q9H6K5 1346 aa7.57□□□□□ -1.2
HMGB1P40-201ENST00000525121 PXDNQ92626 1479 aa7.57□□□□□ -1.2
HMGB1P40-201ENST00000525121 NUTM2BA6NNL0 878 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P40-201ENST00000525121 NUTM2EB1AL46 878 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P40-201ENST00000525121 NUTM2AQ8IVF1 878 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P40-201ENST00000525121 TNS3Q68CZ2 1445 aa7.57□□□□□ -1.2
HMGB1P40-201ENST00000525121 PPIP5K1Q6PFW1 1433 aa7.57□□□□□ -1.2
HMGB1P40-201ENST00000525121 SBNO1A3KN83 1393 aa7.57□□□□□ -1.2
HMGB1P40-201ENST00000525121 USP32Q8NFA0 1604 aa7.56□□□□□ -1.2
HMGB1P40-201ENST00000525121 ST20-MTHFSA0A0A6YYL1 179 aa7.56□□□□□ -1.2
HMGB1P40-201ENST00000525121 PAK3O75914 559 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P40-201ENST00000525121 TMF1P82094 1093 aa7.56□□□□□ -1.2
HMGB1P40-201ENST00000525121 CDCA8Q53HL2 280 aa7.56□□□□□ -1.2
HMGB1P40-201ENST00000525121 ACEP12821 1306 aa7.55□□□□□ -1.2
HMGB1P40-201ENST00000525121 SPATA31A3Q5VYP0 1347 aa7.55□□□□□ -1.2
HMGB1P40-201ENST00000525121 PLEKHG3A1L390 1219 aa7.55□□□□□ -1.2
HMGB1P40-201ENST00000525121 EIF4G2P78344 907 aaKnown RBP eCLIP7.55□□□□□ -1.2
HMGB1P40-201ENST00000525121 POLR3AO14802 1390 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P40-201ENST00000525121 BRD4O60885 1362 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P40-201ENST00000525121 NINLQ9Y2I6 1382 aa7.55□□□□□ -1.2
HMGB1P40-201ENST00000525121 TOPAZ1Q8N9V7 1692 aa7.54□□□□□ -1.2
HMGB1P40-201ENST00000525121 HDGFL2Q7Z4V5 671 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P40-201ENST00000525121 TMC1Q8TDI8 760 aa7.54□□□□□ -1.2
HMGB1P40-201ENST00000525121 PUS7Q96PZ0 661 aaKnown RBP7.54□□□□□ -1.2
HMGB1P40-201ENST00000525121 CABP1Q9NZU7 370 aa7.54□□□□□ -1.2
HMGB1P40-201ENST00000525121 PLEKHG5O94827 1062 aa7.53□□□□□ -1.2
HMGB1P40-201ENST00000525121 ADAMTS2O95450 1211 aa7.53□□□□□ -1.2
HMGB1P40-201ENST00000525121 ZNF772Q68DY9 489 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P40-201ENST00000525121 ZNF692Q9BU19 519 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P40-201ENST00000525121 TERF2IPQ9NYB0 399 aa7.53□□□□□ -1.2
HMGB1P40-201ENST00000525121 RGPD8O14715 1765 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms