RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 COG6Q9Y2V7 657 aa23.4■■□□□ 1.34
PCDHB18P-201ENST00000524813 EFCAB6Q5THR3 1501 aa23.39■■□□□ 1.34
PCDHB18P-201ENST00000524813 CANXP27824 592 aaKnown RBP23.39■■□□□ 1.33
PCDHB18P-201ENST00000524813 PANK1Q8TE04 598 aa23.39■■□□□ 1.33
PCDHB18P-201ENST00000524813 CENPJQ9HC77 1338 aaPredicted RBP23.39■■□□□ 1.33
PCDHB18P-201ENST00000524813 TRPM2O94759 1503 aa23.38■■□□□ 1.33
PCDHB18P-201ENST00000524813 EIF5BO60841 1220 aaKnown RBP23.38■■□□□ 1.33
PCDHB18P-201ENST00000524813 SLKQ9H2G2 1235 aaPredicted RBP23.37■■□□□ 1.33
PCDHB18P-201ENST00000524813 CFAP65Q6ZU64 1925 aaKnown RBP23.37■■□□□ 1.33
PCDHB18P-201ENST00000524813 NINLQ9Y2I6 1382 aa23.37■■□□□ 1.33
PCDHB18P-201ENST00000524813 NGEFQ8N5V2 710 aa23.36■■□□□ 1.33
PCDHB18P-201ENST00000524813 CLTCL1P53675 1640 aa23.36■■□□□ 1.33
PCDHB18P-201ENST00000524813 NLRP1Q9C000 1473 aa23.34■■□□□ 1.33
PCDHB18P-201ENST00000524813 KDM5AP29375 1690 aaKnown RBP23.33■■□□□ 1.33
PCDHB18P-201ENST00000524813 LMTK2Q8IWU2 1503 aa23.33■■□□□ 1.33
PCDHB18P-201ENST00000524813 WWC1Q8IX03 1113 aa23.33■■□□□ 1.32
PCDHB18P-201ENST00000524813 UGGT1Q9NYU2 1555 aa23.32■■□□□ 1.32
PCDHB18P-201ENST00000524813 ABCC3O15438 1527 aa23.32■■□□□ 1.32
PCDHB18P-201ENST00000524813 STAC3Q96MF2 364 aa23.32■■□□□ 1.32
PCDHB18P-201ENST00000524813 PTPRTO14522 1441 aa23.32■■□□□ 1.32
PCDHB18P-201ENST00000524813 RSPH6AQ9H0K4 717 aa23.31■■□□□ 1.32
PCDHB18P-201ENST00000524813 CAMSAP1Q5T5Y3 1602 aa23.31■■□□□ 1.32
PCDHB18P-201ENST00000524813 CARD14Q9BXL6 1004 aa23.3■■□□□ 1.32
PCDHB18P-201ENST00000524813 ANTXR1Q9H6X2 564 aa23.3■■□□□ 1.32
PCDHB18P-201ENST00000524813 SIGLEC1Q9BZZ2 1709 aa23.28■■□□□ 1.32
PCDHB18P-201ENST00000524813 PMFBP1Q8TBY8 1022 aa23.28■■□□□ 1.32
PCDHB18P-201ENST00000524813 UPF2Q9HAU5 1272 aaKnown RBP23.28■■□□□ 1.32
PCDHB18P-201ENST00000524813 NPATQ14207 1427 aa23.27■■□□□ 1.32
PCDHB18P-201ENST00000524813 ERVK-7P63135 1459 aa23.26■■□□□ 1.31
PCDHB18P-201ENST00000524813 L1TD1Q5T7N2 865 aaKnown RBP23.26■■□□□ 1.31
PCDHB18P-201ENST00000524813 TBC1D32Q96NH3 1257 aa23.26■■□□□ 1.31
PCDHB18P-201ENST00000524813 PCDHB15Q9Y5E8 787 aa23.26■■□□□ 1.31
PCDHB18P-201ENST00000524813 ARHGEF40Q8TER5 1519 aa23.25■■□□□ 1.31
PCDHB18P-201ENST00000524813 RARSP54136 660 aaKnown RBP23.25■■□□□ 1.31
PCDHB18P-201ENST00000524813 TRHP20396 242 aaPredicted RBP23.25■■□□□ 1.31
PCDHB18P-201ENST00000524813 NEUROD2Q15784 382 aa23.25■■□□□ 1.31
PCDHB18P-201ENST00000524813 UBE2Q2Q8WVN8 375 aa23.25■■□□□ 1.31
PCDHB18P-201ENST00000524813 ZC3H13Q5T200 1668 aaKnown RBP23.24■■□□□ 1.31
PCDHB18P-201ENST00000524813 POLR3AO14802 1390 aaPredicted RBP23.24■■□□□ 1.31
PCDHB18P-201ENST00000524813 TBC1D2Q9BYX2 928 aa23.24■■□□□ 1.31
PCDHB18P-201ENST00000524813 PDZRN3Q9UPQ7 1066 aa23.23■■□□□ 1.31
PCDHB18P-201ENST00000524813 KIF1BO60333 1816 aa23.23■■□□□ 1.31
PCDHB18P-201ENST00000524813 TNNQ9UQP3 1299 aa23.23■■□□□ 1.31
PCDHB18P-201ENST00000524813 RLBP1P12271 317 aa23.22■■□□□ 1.31
PCDHB18P-201ENST00000524813 AAMPQ13685 434 aa23.22■■□□□ 1.31
PCDHB18P-201ENST00000524813 RRP7AQ9Y3A4 280 aaKnown RBP23.22■■□□□ 1.31
PCDHB18P-201ENST00000524813 CFAP70Q5T0N1 1121 aa23.22■■□□□ 1.31
PCDHB18P-201ENST00000524813 SLC24A1O60721 1099 aa23.21■■□□□ 1.31
PCDHB18P-201ENST00000524813 REREQ9P2R6 1566 aa23.21■■□□□ 1.31
PCDHB18P-201ENST00000524813 MROH2AA6NES4 1674 aa23.21■■□□□ 1.31
PCDHB18P-201ENST00000524813 RRAGDQ9NQL2 400 aaPredicted RBP23.21■■□□□ 1.31
PCDHB18P-201ENST00000524813 KIAA1210Q9ULL0 1709 aa23.2■■□□□ 1.31
PCDHB18P-201ENST00000524813 ZMYM3Q14202 1370 aa23.2■■□□□ 1.3
PCDHB18P-201ENST00000524813 RUNDC1Q96C34 613 aa23.19■■□□□ 1.3
PCDHB18P-201ENST00000524813 BCL2L13Q9BXK5 485 aa23.18■■□□□ 1.3
PCDHB18P-201ENST00000524813 TCP11L2Q8N4U5 519 aa23.17■■□□□ 1.3
PCDHB18P-201ENST00000524813 RWDD1Q9H446 243 aaPredicted RBP23.17■■□□□ 1.3
PCDHB18P-201ENST00000524813 MLECQ14165 292 aa23.16■■□□□ 1.3
PCDHB18P-201ENST00000524813 AGLP35573 1532 aa23.16■■□□□ 1.3
PCDHB18P-201ENST00000524813 TNNT2P45379 298 aaPredicted RBP23.15■■□□□ 1.3
PCDHB18P-201ENST00000524813 SPRYD3Q8NCJ5 442 aa23.15■■□□□ 1.3
PCDHB18P-201ENST00000524813 SHPRHQ149N8 1683 aa23.15■■□□□ 1.3
PCDHB18P-201ENST00000524813 MORC1Q86VD1 984 aa23.15■■□□□ 1.3
PCDHB18P-201ENST00000524813 ARXQ96QS3 562 aa23.14■■□□□ 1.3
PCDHB18P-201ENST00000524813 CHGAP10645 457 aaKnown RBP23.14■■□□□ 1.29
PCDHB18P-201ENST00000524813 WDR63Q8IWG1 891 aa23.14■■□□□ 1.29
PCDHB18P-201ENST00000524813 PHF23Q9BUL5 403 aaPredicted RBP23.14■■□□□ 1.29
PCDHB18P-201ENST00000524813 ADGRF5Q8IZF2 1346 aa23.14■■□□□ 1.29
PCDHB18P-201ENST00000524813 CLTCQ00610 1675 aaKnown RBP23.14■■□□□ 1.29
PCDHB18P-201ENST00000524813 IQSEC2Q5JU85 1478 aa23.13■■□□□ 1.29
PCDHB18P-201ENST00000524813 DNAJC5Q9H3Z4 198 aa23.13■■□□□ 1.29
PCDHB18P-201ENST00000524813 GOLGA6L3A6NEY3 463 aa23.12■■□□□ 1.29
PCDHB18P-201ENST00000524813 XRCC6P12956 609 aaKnown RBP eCLIP23.12■■□□□ 1.29
PCDHB18P-201ENST00000524813 MCM4P33991 863 aa23.12■■□□□ 1.29
PCDHB18P-201ENST00000524813 NSD3Q9BZ95 1437 aa23.11■■□□□ 1.29
PCDHB18P-201ENST00000524813 PREX1Q8TCU6 1659 aa23.11■■□□□ 1.29
PCDHB18P-201ENST00000524813 ADGRB3O60242 1522 aa23.1■■□□□ 1.29
PCDHB18P-201ENST00000524813 NOS1P29475 1434 aa23.1■■□□□ 1.29
PCDHB18P-201ENST00000524813 MYOM2P54296 1465 aa23.1■■□□□ 1.29
PCDHB18P-201ENST00000524813 FSD2A1L4K1 749 aa23.09■■□□□ 1.29
PCDHB18P-201ENST00000524813 IFT172Q9UG01 1749 aa23.09■■□□□ 1.29
PCDHB18P-201ENST00000524813 ARHGAP31Q2M1Z3 1444 aa23.09■■□□□ 1.29
PCDHB18P-201ENST00000524813 GZF1Q9H116 711 aaPredicted RBP23.09■■□□□ 1.29
PCDHB18P-201ENST00000524813 NEURL4Q96JN8 1562 aa23.09■■□□□ 1.29
PCDHB18P-201ENST00000524813 MVPQ14764 893 aaKnown RBP23.08■■□□□ 1.29
PCDHB18P-201ENST00000524813 PIK3C2BO00750 1634 aa23.07■■□□□ 1.28
PCDHB18P-201ENST00000524813 C22orf23Q9BZE7 217 aa23.07■■□□□ 1.28
PCDHB18P-201ENST00000524813 CCDC27Q2M243 656 aa23.06■■□□□ 1.28
PCDHB18P-201ENST00000524813 SBNO2Q9Y2G9 1366 aa23.06■■□□□ 1.28
PCDHB18P-201ENST00000524813 MFAP1P55081 439 aaKnown RBP23.06■■□□□ 1.28
PCDHB18P-201ENST00000524813 CHMP5Q9NZZ3 219 aa23.06■■□□□ 1.28
PCDHB18P-201ENST00000524813 MYH16Q9H6N6 1097 aa23.05■■□□□ 1.28
PCDHB18P-201ENST00000524813 PANK2Q9BZ23 570 aa23.05■■□□□ 1.28
PCDHB18P-201ENST00000524813 SLC12A5Q9H2X9 1139 aa23.05■■□□□ 1.28
PCDHB18P-201ENST00000524813 MTHFSP49914 203 aa23.04■■□□□ 1.28
PCDHB18P-201ENST00000524813 MYO3AQ8NEV4 1616 aa23.04■■□□□ 1.28
PCDHB18P-201ENST00000524813 ZKSCAN2Q63HK3 967 aa23.04■■□□□ 1.28
PCDHB18P-201ENST00000524813 FTSJ3Q8IY81 847 aaKnown RBP23.04■■□□□ 1.28
PCDHB18P-201ENST00000524813 FBXO31Q5XUX0 539 aaPredicted RBP23.03■■□□□ 1.28
PCDHB18P-201ENST00000524813 PPLO60437 1756 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms