RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 COG6Q9Y2V7 657 aa23.4■■□□□ 1.34
PCDHB18P-201ENST00000524813 EFCAB6Q5THR3 1501 aa23.39■■□□□ 1.34
PCDHB18P-201ENST00000524813 CANXP27824 592 aaKnown RBP23.39■■□□□ 1.33
PCDHB18P-201ENST00000524813 PANK1Q8TE04 598 aa23.39■■□□□ 1.33
PCDHB18P-201ENST00000524813 CENPJQ9HC77 1338 aaPredicted RBP23.39■■□□□ 1.33
PCDHB18P-201ENST00000524813 TRPM2O94759 1503 aa23.38■■□□□ 1.33
PCDHB18P-201ENST00000524813 EIF5BO60841 1220 aaKnown RBP23.38■■□□□ 1.33
PCDHB18P-201ENST00000524813 SLKQ9H2G2 1235 aaPredicted RBP23.37■■□□□ 1.33
PCDHB18P-201ENST00000524813 CFAP65Q6ZU64 1925 aaKnown RBP23.37■■□□□ 1.33
PCDHB18P-201ENST00000524813 NINLQ9Y2I6 1382 aa23.37■■□□□ 1.33
PCDHB18P-201ENST00000524813 NGEFQ8N5V2 710 aa23.36■■□□□ 1.33
PCDHB18P-201ENST00000524813 CLTCL1P53675 1640 aa23.36■■□□□ 1.33
PCDHB18P-201ENST00000524813 NLRP1Q9C000 1473 aa23.34■■□□□ 1.33
PCDHB18P-201ENST00000524813 KDM5AP29375 1690 aaKnown RBP23.33■■□□□ 1.33
PCDHB18P-201ENST00000524813 LMTK2Q8IWU2 1503 aa23.33■■□□□ 1.33
PCDHB18P-201ENST00000524813 WWC1Q8IX03 1113 aa23.33■■□□□ 1.32
PCDHB18P-201ENST00000524813 UGGT1Q9NYU2 1555 aa23.32■■□□□ 1.32
PCDHB18P-201ENST00000524813 ABCC3O15438 1527 aa23.32■■□□□ 1.32
PCDHB18P-201ENST00000524813 STAC3Q96MF2 364 aa23.32■■□□□ 1.32
PCDHB18P-201ENST00000524813 PTPRTO14522 1441 aa23.32■■□□□ 1.32
PCDHB18P-201ENST00000524813 RSPH6AQ9H0K4 717 aa23.31■■□□□ 1.32
PCDHB18P-201ENST00000524813 CAMSAP1Q5T5Y3 1602 aa23.31■■□□□ 1.32
PCDHB18P-201ENST00000524813 CARD14Q9BXL6 1004 aa23.3■■□□□ 1.32
PCDHB18P-201ENST00000524813 ANTXR1Q9H6X2 564 aa23.3■■□□□ 1.32
PCDHB18P-201ENST00000524813 SIGLEC1Q9BZZ2 1709 aa23.28■■□□□ 1.32
PCDHB18P-201ENST00000524813 PMFBP1Q8TBY8 1022 aa23.28■■□□□ 1.32
PCDHB18P-201ENST00000524813 UPF2Q9HAU5 1272 aaKnown RBP23.28■■□□□ 1.32
PCDHB18P-201ENST00000524813 NPATQ14207 1427 aa23.27■■□□□ 1.32
PCDHB18P-201ENST00000524813 ERVK-7P63135 1459 aa23.26■■□□□ 1.31
PCDHB18P-201ENST00000524813 L1TD1Q5T7N2 865 aaKnown RBP23.26■■□□□ 1.31
PCDHB18P-201ENST00000524813 TBC1D32Q96NH3 1257 aa23.26■■□□□ 1.31
PCDHB18P-201ENST00000524813 PCDHB15Q9Y5E8 787 aa23.26■■□□□ 1.31
PCDHB18P-201ENST00000524813 ARHGEF40Q8TER5 1519 aa23.25■■□□□ 1.31
PCDHB18P-201ENST00000524813 RARSP54136 660 aaKnown RBP23.25■■□□□ 1.31
PCDHB18P-201ENST00000524813 TRHP20396 242 aaPredicted RBP23.25■■□□□ 1.31
PCDHB18P-201ENST00000524813 NEUROD2Q15784 382 aa23.25■■□□□ 1.31
PCDHB18P-201ENST00000524813 UBE2Q2Q8WVN8 375 aa23.25■■□□□ 1.31
PCDHB18P-201ENST00000524813 ZC3H13Q5T200 1668 aaKnown RBP23.24■■□□□ 1.31
PCDHB18P-201ENST00000524813 POLR3AO14802 1390 aaPredicted RBP23.24■■□□□ 1.31
PCDHB18P-201ENST00000524813 TBC1D2Q9BYX2 928 aa23.24■■□□□ 1.31
PCDHB18P-201ENST00000524813 PDZRN3Q9UPQ7 1066 aa23.23■■□□□ 1.31
PCDHB18P-201ENST00000524813 KIF1BO60333 1816 aa23.23■■□□□ 1.31
PCDHB18P-201ENST00000524813 TNNQ9UQP3 1299 aa23.23■■□□□ 1.31
PCDHB18P-201ENST00000524813 RLBP1P12271 317 aa23.22■■□□□ 1.31
PCDHB18P-201ENST00000524813 AAMPQ13685 434 aa23.22■■□□□ 1.31
PCDHB18P-201ENST00000524813 RRP7AQ9Y3A4 280 aaKnown RBP23.22■■□□□ 1.31
PCDHB18P-201ENST00000524813 CFAP70Q5T0N1 1121 aa23.22■■□□□ 1.31
PCDHB18P-201ENST00000524813 SLC24A1O60721 1099 aa23.21■■□□□ 1.31
PCDHB18P-201ENST00000524813 REREQ9P2R6 1566 aa23.21■■□□□ 1.31
PCDHB18P-201ENST00000524813 MROH2AA6NES4 1674 aa23.21■■□□□ 1.31
PCDHB18P-201ENST00000524813 RRAGDQ9NQL2 400 aaPredicted RBP23.21■■□□□ 1.31
PCDHB18P-201ENST00000524813 KIAA1210Q9ULL0 1709 aa23.2■■□□□ 1.31
PCDHB18P-201ENST00000524813 ZMYM3Q14202 1370 aa23.2■■□□□ 1.3
PCDHB18P-201ENST00000524813 RUNDC1Q96C34 613 aa23.19■■□□□ 1.3
PCDHB18P-201ENST00000524813 BCL2L13Q9BXK5 485 aa23.18■■□□□ 1.3
PCDHB18P-201ENST00000524813 TCP11L2Q8N4U5 519 aa23.17■■□□□ 1.3
PCDHB18P-201ENST00000524813 RWDD1Q9H446 243 aaPredicted RBP23.17■■□□□ 1.3
PCDHB18P-201ENST00000524813 MLECQ14165 292 aa23.16■■□□□ 1.3
PCDHB18P-201ENST00000524813 AGLP35573 1532 aa23.16■■□□□ 1.3
PCDHB18P-201ENST00000524813 TNNT2P45379 298 aaPredicted RBP23.15■■□□□ 1.3
PCDHB18P-201ENST00000524813 SPRYD3Q8NCJ5 442 aa23.15■■□□□ 1.3
PCDHB18P-201ENST00000524813 SHPRHQ149N8 1683 aa23.15■■□□□ 1.3
PCDHB18P-201ENST00000524813 MORC1Q86VD1 984 aa23.15■■□□□ 1.3
PCDHB18P-201ENST00000524813 ARXQ96QS3 562 aa23.14■■□□□ 1.3
PCDHB18P-201ENST00000524813 CHGAP10645 457 aaKnown RBP23.14■■□□□ 1.29
PCDHB18P-201ENST00000524813 WDR63Q8IWG1 891 aa23.14■■□□□ 1.29
PCDHB18P-201ENST00000524813 PHF23Q9BUL5 403 aaPredicted RBP23.14■■□□□ 1.29
PCDHB18P-201ENST00000524813 ADGRF5Q8IZF2 1346 aa23.14■■□□□ 1.29
PCDHB18P-201ENST00000524813 CLTCQ00610 1675 aaKnown RBP23.14■■□□□ 1.29
PCDHB18P-201ENST00000524813 IQSEC2Q5JU85 1478 aa23.13■■□□□ 1.29
PCDHB18P-201ENST00000524813 DNAJC5Q9H3Z4 198 aa23.13■■□□□ 1.29
PCDHB18P-201ENST00000524813 GOLGA6L3A6NEY3 463 aa23.12■■□□□ 1.29
PCDHB18P-201ENST00000524813 XRCC6P12956 609 aaKnown RBP eCLIP23.12■■□□□ 1.29
PCDHB18P-201ENST00000524813 MCM4P33991 863 aa23.12■■□□□ 1.29
PCDHB18P-201ENST00000524813 NSD3Q9BZ95 1437 aa23.11■■□□□ 1.29
PCDHB18P-201ENST00000524813 PREX1Q8TCU6 1659 aa23.11■■□□□ 1.29
PCDHB18P-201ENST00000524813 ADGRB3O60242 1522 aa23.1■■□□□ 1.29
PCDHB18P-201ENST00000524813 NOS1P29475 1434 aa23.1■■□□□ 1.29
PCDHB18P-201ENST00000524813 MYOM2P54296 1465 aa23.1■■□□□ 1.29
PCDHB18P-201ENST00000524813 FSD2A1L4K1 749 aa23.09■■□□□ 1.29
PCDHB18P-201ENST00000524813 IFT172Q9UG01 1749 aa23.09■■□□□ 1.29
PCDHB18P-201ENST00000524813 ARHGAP31Q2M1Z3 1444 aa23.09■■□□□ 1.29
PCDHB18P-201ENST00000524813 GZF1Q9H116 711 aaPredicted RBP23.09■■□□□ 1.29
PCDHB18P-201ENST00000524813 NEURL4Q96JN8 1562 aa23.09■■□□□ 1.29
PCDHB18P-201ENST00000524813 MVPQ14764 893 aaKnown RBP23.08■■□□□ 1.29
PCDHB18P-201ENST00000524813 PIK3C2BO00750 1634 aa23.07■■□□□ 1.28
PCDHB18P-201ENST00000524813 C22orf23Q9BZE7 217 aa23.07■■□□□ 1.28
PCDHB18P-201ENST00000524813 CCDC27Q2M243 656 aa23.06■■□□□ 1.28
PCDHB18P-201ENST00000524813 SBNO2Q9Y2G9 1366 aa23.06■■□□□ 1.28
PCDHB18P-201ENST00000524813 MFAP1P55081 439 aaKnown RBP23.06■■□□□ 1.28
PCDHB18P-201ENST00000524813 CHMP5Q9NZZ3 219 aa23.06■■□□□ 1.28
PCDHB18P-201ENST00000524813 MYH16Q9H6N6 1097 aa23.05■■□□□ 1.28
PCDHB18P-201ENST00000524813 PANK2Q9BZ23 570 aa23.05■■□□□ 1.28
PCDHB18P-201ENST00000524813 SLC12A5Q9H2X9 1139 aa23.05■■□□□ 1.28
PCDHB18P-201ENST00000524813 MTHFSP49914 203 aa23.04■■□□□ 1.28
PCDHB18P-201ENST00000524813 MYO3AQ8NEV4 1616 aa23.04■■□□□ 1.28
PCDHB18P-201ENST00000524813 ZKSCAN2Q63HK3 967 aa23.04■■□□□ 1.28
PCDHB18P-201ENST00000524813 FTSJ3Q8IY81 847 aaKnown RBP23.04■■□□□ 1.28
PCDHB18P-201ENST00000524813 FBXO31Q5XUX0 539 aaPredicted RBP23.03■■□□□ 1.28
PCDHB18P-201ENST00000524813 PPLO60437 1756 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms