RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 TONSLQ96HA7 1378 aa25.26■■□□□ 1.63
PACSIN3-202ENST00000524509 PPLO60437 1756 aa25.26■■□□□ 1.63
PACSIN3-202ENST00000524509 RGS12O14924 1447 aa25.23■■□□□ 1.63
PACSIN3-202ENST00000524509 RBM6P78332 1123 aaKnown RBP25.23■■□□□ 1.63
PACSIN3-202ENST00000524509 L3MBTL2Q969R5 705 aa25.23■■□□□ 1.63
PACSIN3-202ENST00000524509 NRXN1Q9ULB1 1477 aa25.22■■□□□ 1.63
PACSIN3-202ENST00000524509 PIK3C2GO75747 1445 aa25.22■■□□□ 1.63
PACSIN3-202ENST00000524509 QTRT2Q9H974 415 aaKnown RBP25.22■■□□□ 1.63
PACSIN3-202ENST00000524509 PNPLA6Q8IY17 1366 aa25.21■■□□□ 1.63
PACSIN3-202ENST00000524509 C8orf37Q96NL8 207 aa25.21■■□□□ 1.63
PACSIN3-202ENST00000524509 C14orf93Q9H972 538 aaKnown RBP25.21■■□□□ 1.63
PACSIN3-202ENST00000524509 ADGRL3Q9HAR2 1447 aa25.2■■□□□ 1.62
PACSIN3-202ENST00000524509 METP08581 1390 aa25.19■■□□□ 1.62
PACSIN3-202ENST00000524509 IFT172Q9UG01 1749 aa25.19■■□□□ 1.62
PACSIN3-202ENST00000524509 SRCAPQ6ZRS2 3230 aa25.19■■□□□ 1.62
PACSIN3-202ENST00000524509 DDX17Q92841 729 aaKnown RBP25.16■■□□□ 1.62
PACSIN3-202ENST00000524509 NALCNQ8IZF0 1738 aa25.15■■□□□ 1.62
PACSIN3-202ENST00000524509 NGLY1Q96IV0 654 aa25.13■■□□□ 1.61
PACSIN3-202ENST00000524509 LAMC1P11047 1609 aa25.12■■□□□ 1.61
PACSIN3-202ENST00000524509 CFAP70Q5T0N1 1121 aa25.12■■□□□ 1.61
PACSIN3-202ENST00000524509 PRAG1Q86YV5 1406 aa25.11■■□□□ 1.61
PACSIN3-202ENST00000524509 C1orf167Q5SNV9 1468 aa25.1■■□□□ 1.61
PACSIN3-202ENST00000524509 ATAD2Q6PL18 1390 aa25.09■■□□□ 1.61
PACSIN3-202ENST00000524509 ADAMTS2O95450 1211 aa25.09■■□□□ 1.61
PACSIN3-202ENST00000524509 LRPPRCP42704 1394 aaKnown RBP25.07■■□□□ 1.6
PACSIN3-202ENST00000524509 SIRT1Q96EB6 747 aa25.07■■□□□ 1.6
PACSIN3-202ENST00000524509 ABCC11Q96J66 1382 aa25.06■■□□□ 1.6
PACSIN3-202ENST00000524509 SOS2Q07890 1332 aaPredicted RBP25.06■■□□□ 1.6
PACSIN3-202ENST00000524509 TMEM132EQ6IEE7 984 aa25.04■■□□□ 1.6
PACSIN3-202ENST00000524509 USP21Q9UK80 565 aa25.04■■□□□ 1.6
PACSIN3-202ENST00000524509 TRPC5Q9UL62 973 aaPredicted RBP25.04■■□□□ 1.6
PACSIN3-202ENST00000524509 PTCH1Q13635 1447 aa25.03■■□□□ 1.6
PACSIN3-202ENST00000524509 FNBP4Q8N3X1 1017 aaPredicted RBP25.03■■□□□ 1.6
PACSIN3-202ENST00000524509 YTHDC2Q9H6S0 1430 aaKnown RBP25.03■■□□□ 1.6
PACSIN3-202ENST00000524509 STK26Q9P289 416 aa25.02■■□□□ 1.6
PACSIN3-202ENST00000524509 TECPR2O15040 1411 aa25.01■■□□□ 1.59
PACSIN3-202ENST00000524509 ORAI2Q96SN7 254 aa25■■□□□ 1.59
PACSIN3-202ENST00000524509 EP400Q96L91 3159 aa24.99■■□□□ 1.59
PACSIN3-202ENST00000524509 ATRNO75882 1429 aa24.99■■□□□ 1.59
PACSIN3-202ENST00000524509 COL22A1Q8NFW1 1626 aaPredicted RBP24.99■■□□□ 1.59
PACSIN3-202ENST00000524509 KIAA1210Q9ULL0 1709 aa24.99■■□□□ 1.59
PACSIN3-202ENST00000524509 ROCK2O75116 1388 aaKnown RBP24.97■■□□□ 1.59
PACSIN3-202ENST00000524509 ROBO2Q9HCK4 1378 aa24.97■■□□□ 1.59
PACSIN3-202ENST00000524509 ZRANB1Q9UGI0 708 aa24.97■■□□□ 1.59
PACSIN3-202ENST00000524509 POGKQ9P215 609 aa24.95■■□□□ 1.58
PACSIN3-202ENST00000524509 ADGRB1O14514 1584 aa24.95■■□□□ 1.58
PACSIN3-202ENST00000524509 CCDC125Q86Z20 511 aa24.94■■□□□ 1.58
PACSIN3-202ENST00000524509 DLC1Q96QB1 1528 aa24.93■■□□□ 1.58
PACSIN3-202ENST00000524509 NBPF1Q3BBV0 1214 aa24.93■■□□□ 1.58
PACSIN3-202ENST00000524509 NBPF8Q3BBV2 869 aa24.93■■□□□ 1.58
PACSIN3-202ENST00000524509 TRAK1Q9UPV9 953 aa24.93■■□□□ 1.58
PACSIN3-202ENST00000524509 GPRASP1Q5JY77 1395 aa24.91■■□□□ 1.58
PACSIN3-202ENST00000524509 BCL9LQ86UU0 1499 aa24.9■■□□□ 1.58
PACSIN3-202ENST00000524509 CARD11Q9BXL7 1154 aa24.9■■□□□ 1.58
PACSIN3-202ENST00000524509 EIF3AQ14152 1382 aaKnown RBP24.9■■□□□ 1.58
PACSIN3-202ENST00000524509 MARF1Q9Y4F3 1742 aaKnown RBP24.89■■□□□ 1.58
PACSIN3-202ENST00000524509 NPHP3Q7Z494 1330 aa24.89■■□□□ 1.58
PACSIN3-202ENST00000524509 PRAM1Q96QH2 718 aa24.89■■□□□ 1.58
PACSIN3-202ENST00000524509 RALGAPBQ86X10 1494 aa24.89■■□□□ 1.57
PACSIN3-202ENST00000524509 KNDC1Q76NI1 1749 aa24.88■■□□□ 1.57
PACSIN3-202ENST00000524509 WAPLQ7Z5K2 1190 aa24.87■■□□□ 1.57
PACSIN3-202ENST00000524509 PXDNQ92626 1479 aa24.87■■□□□ 1.57
PACSIN3-202ENST00000524509 CDC42BPGQ6DT37 1551 aa24.86■■□□□ 1.57
PACSIN3-202ENST00000524509 SLC24A1O60721 1099 aa24.86■■□□□ 1.57
PACSIN3-202ENST00000524509 TRPM1Q7Z4N2 1603 aa24.86■■□□□ 1.57
PACSIN3-202ENST00000524509 GJD4Q96KN9 370 aaPredicted RBP24.85■■□□□ 1.57
PACSIN3-202ENST00000524509 ESCO1Q5FWF5 840 aa24.84■■□□□ 1.57
PACSIN3-202ENST00000524509 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.82■■□□□ 1.56
PACSIN3-202ENST00000524509 CENPJQ9HC77 1338 aaPredicted RBP24.82■■□□□ 1.56
PACSIN3-202ENST00000524509 FOXO3O43524 673 aa24.8■■□□□ 1.56
PACSIN3-202ENST00000524509 SAFB2Q14151 953 aaKnown RBP eCLIP24.78■■□□□ 1.56
PACSIN3-202ENST00000524509 PLEKHH1Q9ULM0 1364 aa24.78■■□□□ 1.56
PACSIN3-202ENST00000524509 XPCQ01831 940 aaPredicted RBP24.77■■□□□ 1.56
PACSIN3-202ENST00000524509 BLMP54132 1417 aaPredicted RBP24.77■■□□□ 1.56
PACSIN3-202ENST00000524509 SLIT2O94813 1529 aa24.76■■□□□ 1.55
PACSIN3-202ENST00000524509 UNC5CLQ8IV45 518 aa24.75■■□□□ 1.55
PACSIN3-202ENST00000524509 GLI3P10071 1580 aa24.75■■□□□ 1.55
PACSIN3-202ENST00000524509 MINK1Q8N4C8 1332 aaPredicted RBP24.73■■□□□ 1.55
PACSIN3-202ENST00000524509 ZEB1P37275 1124 aaPredicted RBP24.73■■□□□ 1.55
PACSIN3-202ENST00000524509 WASLO00401 505 aaPredicted RBP24.72■■□□□ 1.55
PACSIN3-202ENST00000524509 SPATA31A3Q5VYP0 1347 aa24.71■■□□□ 1.55
PACSIN3-202ENST00000524509 SBNO2Q9Y2G9 1366 aa24.7■■□□□ 1.55
PACSIN3-202ENST00000524509 ARHGEF28Q8N1W1 1705 aaKnown RBP24.69■■□□□ 1.54
PACSIN3-202ENST00000524509 EVC2Q86UK5 1308 aa24.69■■□□□ 1.54
PACSIN3-202ENST00000524509 BRWD3Q6RI45 1802 aa24.69■■□□□ 1.54
PACSIN3-202ENST00000524509 KIF1AQ12756 1690 aa24.69■■□□□ 1.54
PACSIN3-202ENST00000524509 NUTM2FA1L443 756 aa24.68■■□□□ 1.54
PACSIN3-202ENST00000524509 HIRIP3Q9BW71 556 aaPredicted RBP24.68■■□□□ 1.54
PACSIN3-202ENST00000524509 USP32Q8NFA0 1604 aa24.68■■□□□ 1.54
PACSIN3-202ENST00000524509 USP47Q96K76 1375 aa24.67■■□□□ 1.54
PACSIN3-202ENST00000524509 ADGRB2O60241 1585 aa24.67■■□□□ 1.54
PACSIN3-202ENST00000524509 ANKARQ7Z5J8 1434 aa24.67■■□□□ 1.54
PACSIN3-202ENST00000524509 FMN2Q9NZ56 1722 aa24.66■■□□□ 1.54
PACSIN3-202ENST00000524509 EIF4G2P78344 907 aaKnown RBP eCLIP24.66■■□□□ 1.54
PACSIN3-202ENST00000524509 DEFB132Q7Z7B7 95 aa24.66■■□□□ 1.54
PACSIN3-202ENST00000524509 SF3B2Q13435 895 aaKnown RBP24.65■■□□□ 1.54
PACSIN3-202ENST00000524509 ST20-MTHFSA0A0A6YYL1 179 aa24.64■■□□□ 1.54
PACSIN3-202ENST00000524509 CDK19Q9BWU1 502 aa24.64■■□□□ 1.54
PACSIN3-202ENST00000524509 KRT28Q7Z3Y7 464 aa24.63■■□□□ 1.53
PACSIN3-202ENST00000524509 SEPT12Q8IYM1 358 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms