RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 ACIN1Q9UKV3 1341 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-233ENST00000522052 CFAP99D6REC4 459 aa8.91□□□□□ -0.98
CTNNA1-233ENST00000522052 RANGAP1P46060 587 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-233ENST00000522052 FAM98CQ17RN3 349 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-233ENST00000522052 SLF2Q8IX21 1173 aa8.91□□□□□ -0.98
CTNNA1-233ENST00000522052 ADAMTS19Q8TE59 1207 aa8.9□□□□□ -0.98
CTNNA1-233ENST00000522052 LRRN4Q8WUT4 740 aa8.9□□□□□ -0.98
CTNNA1-233ENST00000522052 TSC1Q92574 1164 aa8.9□□□□□ -0.98
CTNNA1-233ENST00000522052 C6orf229H3BNL8 230 aa8.89□□□□□ -0.99
CTNNA1-233ENST00000522052 PDE4CQ08493 712 aa8.89□□□□□ -0.99
CTNNA1-233ENST00000522052 FUT2Q10981 343 aa8.89□□□□□ -0.99
CTNNA1-233ENST00000522052 CFHP08603 1231 aa8.88□□□□□ -0.99
CTNNA1-233ENST00000522052 POTEEQ6S8J3 1075 aa8.88□□□□□ -0.99
CTNNA1-233ENST00000522052 AEBP1Q8IUX7 1158 aa8.88□□□□□ -0.99
CTNNA1-233ENST00000522052 POTEMA6NI47 508 aa8.87□□□□□ -0.99
CTNNA1-233ENST00000522052 ATP6V1AP38606 617 aa8.87□□□□□ -0.99
CTNNA1-233ENST00000522052 VAC14Q08AM6 782 aa8.87□□□□□ -0.99
CTNNA1-233ENST00000522052 DMRTA1Q5VZB9 504 aa8.87□□□□□ -0.99
CTNNA1-233ENST00000522052 SAMD7Q7Z3H4 446 aa8.87□□□□□ -0.99
CTNNA1-233ENST00000522052 NPM2Q86SE8 214 aaKnown RBP8.87□□□□□ -0.99
CTNNA1-233ENST00000522052 LAPTM4BQ86VI4 370 aa8.87□□□□□ -0.99
CTNNA1-233ENST00000522052 PBXIP1Q96AQ6 731 aa8.87□□□□□ -0.99
CTNNA1-233ENST00000522052 ERBB3P21860 1342 aa8.86□□□□□ -0.99
CTNNA1-233ENST00000522052 VPS9D1Q9Y2B5 631 aa8.86□□□□□ -0.99
CTNNA1-233ENST00000522052 PBX2P40425 430 aa8.85□□□□□ -0.99
CTNNA1-233ENST00000522052 VARS2Q5ST30 1063 aaKnown RBP8.85□□□□□ -0.99
CTNNA1-233ENST00000522052 CFAP70Q5T0N1 1121 aa8.85□□□□□ -0.99
CTNNA1-233ENST00000522052 PRR7Q8TB68 274 aa8.85□□□□□ -0.99
CTNNA1-233ENST00000522052 EPS8L1Q8TE68 723 aa8.85□□□□□ -0.99
CTNNA1-233ENST00000522052 ALG2Q9H553 416 aa8.85□□□□□ -0.99
CTNNA1-233ENST00000522052 SYMPKQ92797 1274 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-233ENST00000522052 PPP1R12CQ9BZL4 782 aa8.84□□□□□ -0.99
CTNNA1-233ENST00000522052 NBPF3Q9H094 633 aa8.84□□□□□ -0.99
CTNNA1-233ENST00000522052 SOX11P35716 441 aa8.83□□□□□ -1
CTNNA1-233ENST00000522052 SRPK2P78362 688 aaKnown RBP8.83□□□□□ -1
CTNNA1-233ENST00000522052 KMT5BQ4FZB7 885 aa8.83□□□□□ -1
CTNNA1-233ENST00000522052 AXIN2Q9Y2T1 843 aa8.83□□□□□ -1
CTNNA1-233ENST00000522052 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.82□□□□□ -1
CTNNA1-233ENST00000522052 RNF40O75150 1001 aa8.82□□□□□ -1
CTNNA1-233ENST00000522052 RFX1P22670 979 aa8.82□□□□□ -1
CTNNA1-233ENST00000522052 POTEGQ6S5H5 508 aa8.82□□□□□ -1
CTNNA1-233ENST00000522052 RETREG3Q86VR2 466 aa8.82□□□□□ -1
CTNNA1-233ENST00000522052 BHMG1C9JSJ3 638 aaPredicted RBP8.81□□□□□ -1
CTNNA1-233ENST00000522052 NR6A1Q15406 480 aa8.81□□□□□ -1
CTNNA1-233ENST00000522052 MORN1Q5T089 497 aa8.81□□□□□ -1
CTNNA1-233ENST00000522052 PALM3A6NDB9 673 aaPredicted RBP8.8□□□□□ -1
CTNNA1-233ENST00000522052 PER1O15534 1290 aaPredicted RBP8.8□□□□□ -1
CTNNA1-233ENST00000522052 ACTN4O43707 911 aaKnown RBP8.8□□□□□ -1
CTNNA1-233ENST00000522052 Q3C1V9 767 aa8.8□□□□□ -1
CTNNA1-233ENST00000522052 DESI1Q6ICB0 168 aa8.8□□□□□ -1
CTNNA1-233ENST00000522052 ZFRQ96KR1 1074 aaKnown RBP8.8□□□□□ -1
CTNNA1-233ENST00000522052 PCDH10Q9P2E7 1040 aa8.8□□□□□ -1
CTNNA1-233ENST00000522052 USTQ9Y2C2 406 aa8.8□□□□□ -1
CTNNA1-233ENST00000522052 PNMA1Q8ND90 353 aa8.79□□□□□ -1
CTNNA1-233ENST00000522052 UCN2Q96RP3 112 aa8.79□□□□□ -1
CTNNA1-233ENST00000522052 PATL2C9JE40 543 aaKnown RBP8.78□□□□□ -1
CTNNA1-233ENST00000522052 CSB-PGBD3P0DP91 1061 aa8.78□□□□□ -1
CTNNA1-233ENST00000522052 SEMA3FQ13275 785 aa8.78□□□□□ -1
CTNNA1-233ENST00000522052 ZNF687Q8N1G0 1237 aa8.78□□□□□ -1
CTNNA1-233ENST00000522052 SLC27A5Q9Y2P5 690 aa8.78□□□□□ -1
CTNNA1-233ENST00000522052 LMOD1P29536 600 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-233ENST00000522052 PUS10Q3MIT2 529 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-233ENST00000522052 TFIP11Q9UBB9 837 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-233ENST00000522052 TK2O00142 265 aa8.76□□□□□ -1.01
CTNNA1-233ENST00000522052 LYPD8Q6UX82 237 aa8.76□□□□□ -1.01
CTNNA1-233ENST00000522052 LRCH3Q96II8 777 aa8.76□□□□□ -1.01
CTNNA1-233ENST00000522052 PRR14Q9BWN1 585 aa8.76□□□□□ -1.01
CTNNA1-233ENST00000522052 GZF1Q9H116 711 aaPredicted RBP8.76□□□□□ -1.01
CTNNA1-233ENST00000522052 BRD1O95696 1058 aa8.75□□□□□ -1.01
CTNNA1-233ENST00000522052 EIF4G2P78344 907 aaKnown RBP eCLIP8.75□□□□□ -1.01
CTNNA1-233ENST00000522052 MRPL50Q8N5N7 158 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-233ENST00000522052 EMP3P54852 163 aa8.74□□□□□ -1.01
CTNNA1-233ENST00000522052 KCNA1Q09470 495 aa8.74□□□□□ -1.01
CTNNA1-233ENST00000522052 TMCO4Q5TGY1 634 aa8.74□□□□□ -1.01
CTNNA1-233ENST00000522052 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.74□□□□□ -1.01
CTNNA1-233ENST00000522052 NR1H3Q13133 447 aa8.73□□□□□ -1.01
CTNNA1-233ENST00000522052 RNF19BQ6ZMZ0 732 aa8.73□□□□□ -1.01
CTNNA1-233ENST00000522052 SALL2Q9Y467 1007 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-233ENST00000522052 MAFBQ9Y5Q3 323 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-233ENST00000522052 ST18O60284 1047 aa8.72□□□□□ -1.01
CTNNA1-233ENST00000522052 ATG7O95352 703 aa8.72□□□□□ -1.01
CTNNA1-233ENST00000522052 USB1Q9BQ65 265 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-233ENST00000522052 ATP9BO43861 1147 aa8.71□□□□□ -1.02
CTNNA1-233ENST00000522052 BLOC1S3Q6QNY0 202 aa8.71□□□□□ -1.02
CTNNA1-233ENST00000522052 TBC1D9Q6ZT07 1266 aa8.71□□□□□ -1.02
CTNNA1-233ENST00000522052 FAM205CA6NFA0 338 aa8.7□□□□□ -1.02
CTNNA1-233ENST00000522052 BRICD5Q6PL45 260 aa8.7□□□□□ -1.02
CTNNA1-233ENST00000522052 MARVELD3Q96A59 401 aa8.7□□□□□ -1.02
CTNNA1-233ENST00000522052 FKBPLQ9UIM3 349 aa8.7□□□□□ -1.02
CTNNA1-233ENST00000522052 ZBBXA8MT70 800 aa8.69□□□□□ -1.02
CTNNA1-233ENST00000522052 F12P00748 615 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-233ENST00000522052 FBXO45P0C2W1 286 aa8.69□□□□□ -1.02
CTNNA1-233ENST00000522052 CDCA8Q53HL2 280 aa8.69□□□□□ -1.02
CTNNA1-233ENST00000522052 ADGRD1Q6QNK2 874 aa8.69□□□□□ -1.02
CTNNA1-233ENST00000522052 RGS22Q8NE09 1264 aa8.69□□□□□ -1.02
CTNNA1-233ENST00000522052 ZC3H4Q9UPT8 1303 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-233ENST00000522052 CARNS1A5YM72 827 aa8.68□□□□□ -1.02
CTNNA1-233ENST00000522052 FMNL1O95466 1100 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-233ENST00000522052 MFAP1P55081 439 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-233ENST00000522052 SCUBE3Q8IX30 993 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms