RNA–Protein interactions for RNA: ENST00000521488.1

IGHV3-19-201, Transcript of immunoglobulin heavy variable 3-19 (pseudogene), humanhuman

BASIC

Gene IGHV3-19, Length 291 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-19-201ENST00000521488 PCGF6Q9BYE7 350 aa31.62■■■□□ 2.65
IGHV3-19-201ENST00000521488 BRINP3Q76B58 766 aa31.61■■■□□ 2.65
IGHV3-19-201ENST00000521488 C1orf167Q5SNV9 1468 aa31.6■■■□□ 2.65
IGHV3-19-201ENST00000521488 COL16A1Q07092 1604 aaPredicted RBP31.58■■■□□ 2.65
IGHV3-19-201ENST00000521488 ARHGEF28Q8N1W1 1705 aaKnown RBP31.58■■■□□ 2.65
IGHV3-19-201ENST00000521488 NHSL1Q5SYE7 1610 aa31.57■■■□□ 2.64
IGHV3-19-201ENST00000521488 PRAM1Q96QH2 718 aa31.57■■■□□ 2.64
IGHV3-19-201ENST00000521488 FMN2Q9NZ56 1722 aa31.56■■■□□ 2.64
IGHV3-19-201ENST00000521488 TRAK1Q9UPV9 953 aa31.56■■■□□ 2.64
IGHV3-19-201ENST00000521488 ADGRB2O60241 1585 aa31.55■■■□□ 2.64
IGHV3-19-201ENST00000521488 POGKQ9P215 609 aa31.54■■■□□ 2.64
IGHV3-19-201ENST00000521488 TRPM1Q7Z4N2 1603 aa31.53■■■□□ 2.64
IGHV3-19-201ENST00000521488 MED1Q15648 1581 aaPredicted RBP31.51■■■□□ 2.64
IGHV3-19-201ENST00000521488 TONSLQ96HA7 1378 aa31.51■■■□□ 2.63
IGHV3-19-201ENST00000521488 SAFB2Q14151 953 aaKnown RBP eCLIP31.5■■■□□ 2.63
IGHV3-19-201ENST00000521488 NBPF1Q3BBV0 1214 aa31.47■■■□□ 2.63
IGHV3-19-201ENST00000521488 JCADQ9P266 1359 aa31.45■■■□□ 2.63
IGHV3-19-201ENST00000521488 ORAI2Q96SN7 254 aa31.45■■■□□ 2.63
IGHV3-19-201ENST00000521488 SHPRHQ149N8 1683 aa31.43■■■□□ 2.62
IGHV3-19-201ENST00000521488 DISP3Q9P2K9 1392 aa31.43■■■□□ 2.62
IGHV3-19-201ENST00000521488 KIF1AQ12756 1690 aa31.41■■■□□ 2.62
IGHV3-19-201ENST00000521488 ESCO1Q5FWF5 840 aa31.4■■■□□ 2.62
IGHV3-19-201ENST00000521488 MINK1Q8N4C8 1332 aaPredicted RBP31.4■■■□□ 2.62
IGHV3-19-201ENST00000521488 NUTM2FA1L443 756 aa31.39■■■□□ 2.62
IGHV3-19-201ENST00000521488 CLSPNQ9HAW4 1339 aa31.39■■■□□ 2.62
IGHV3-19-201ENST00000521488 ANKARQ7Z5J8 1434 aa31.39■■■□□ 2.62
IGHV3-19-201ENST00000521488 ROCK2O75116 1388 aaKnown RBP31.38■■■□□ 2.61
IGHV3-19-201ENST00000521488 EIF3AQ14152 1382 aaKnown RBP31.38■■■□□ 2.61
IGHV3-19-201ENST00000521488 RGPD8O14715 1765 aaPredicted RBP31.38■■■□□ 2.61
IGHV3-19-201ENST00000521488 DDX17Q92841 729 aaKnown RBP31.37■■■□□ 2.61
IGHV3-19-201ENST00000521488 USP32Q8NFA0 1604 aa31.37■■■□□ 2.61
IGHV3-19-201ENST00000521488 HIRIP3Q9BW71 556 aaPredicted RBP31.36■■■□□ 2.61
IGHV3-19-201ENST00000521488 TULP4Q9NRJ4 1543 aa31.35■■■□□ 2.61
IGHV3-19-201ENST00000521488 NBPF8Q3BBV2 869 aa31.35■■■□□ 2.61
IGHV3-19-201ENST00000521488 RALGAPBQ86X10 1494 aa31.33■■■□□ 2.61
IGHV3-19-201ENST00000521488 NPHP3Q7Z494 1330 aa31.33■■■□□ 2.61
IGHV3-19-201ENST00000521488 GPRASP1Q5JY77 1395 aa31.32■■■□□ 2.6
IGHV3-19-201ENST00000521488 QRICH2Q9H0J4 1663 aa31.32■■■□□ 2.6
IGHV3-19-201ENST00000521488 SOS2Q07890 1332 aaPredicted RBP31.32■■■□□ 2.6
IGHV3-19-201ENST00000521488 LRRC59Q96AG4 307 aaKnown RBP31.32■■■□□ 2.6
IGHV3-19-201ENST00000521488 WASLO00401 505 aaPredicted RBP31.31■■■□□ 2.6
IGHV3-19-201ENST00000521488 SPATA31A6Q5VVP1 1343 aa31.3■■■□□ 2.6
IGHV3-19-201ENST00000521488 CENPJQ9HC77 1338 aaPredicted RBP31.3■■■□□ 2.6
IGHV3-19-201ENST00000521488 PXDNQ92626 1479 aa31.3■■■□□ 2.6
IGHV3-19-201ENST00000521488 ITSN1Q15811 1721 aa31.27■■■□□ 2.6
IGHV3-19-201ENST00000521488 FOXO3O43524 673 aa31.26■■■□□ 2.59
IGHV3-19-201ENST00000521488 PHF8Q9UPP1 1060 aa31.26■■■□□ 2.59
IGHV3-19-201ENST00000521488 PNPLA6Q8IY17 1366 aa31.26■■■□□ 2.59
IGHV3-19-201ENST00000521488 ATP7BP35670 1465 aa31.24■■■□□ 2.59
IGHV3-19-201ENST00000521488 LRP6O75581 1613 aa31.24■■■□□ 2.59
IGHV3-19-201ENST00000521488 PRR36Q9H6K5 1346 aa31.24■■■□□ 2.59
IGHV3-19-201ENST00000521488 PHF23Q9BUL5 403 aaPredicted RBP31.23■■■□□ 2.59
IGHV3-19-201ENST00000521488 TOPAZ1Q8N9V7 1692 aa31.21■■■□□ 2.59
IGHV3-19-201ENST00000521488 COL22A1Q8NFW1 1626 aaPredicted RBP31.2■■■□□ 2.59
IGHV3-19-201ENST00000521488 CCER1Q8TC90 406 aaPredicted RBP31.2■■■□□ 2.59
IGHV3-19-201ENST00000521488 TIMELESSQ9UNS1 1208 aa31.2■■■□□ 2.59
IGHV3-19-201ENST00000521488 XPCQ01831 940 aaPredicted RBP31.19■■■□□ 2.58
IGHV3-19-201ENST00000521488 CDK19Q9BWU1 502 aa31.19■■■□□ 2.58
IGHV3-19-201ENST00000521488 CARD11Q9BXL7 1154 aa31.19■■■□□ 2.58
IGHV3-19-201ENST00000521488 PMFBP1Q8TBY8 1022 aa31.15■■■□□ 2.58
IGHV3-19-201ENST00000521488 NUDT16Q96DE0 195 aaKnown RBP31.15■■■□□ 2.58
IGHV3-19-201ENST00000521488 KRT28Q7Z3Y7 464 aa31.14■■■□□ 2.58
IGHV3-19-201ENST00000521488 SBNO1A3KN83 1393 aa31.11■■■□□ 2.57
IGHV3-19-201ENST00000521488 NUTM2BA6NNL0 878 aaPredicted RBP31.11■■■□□ 2.57
IGHV3-19-201ENST00000521488 NUTM2EB1AL46 878 aaPredicted RBP31.11■■■□□ 2.57
IGHV3-19-201ENST00000521488 PSME1Q06323 249 aa31.11■■■□□ 2.57
IGHV3-19-201ENST00000521488 MEX3CQ5U5Q3 659 aaKnown RBP31.11■■■□□ 2.57
IGHV3-19-201ENST00000521488 TNS3Q68CZ2 1445 aa31.11■■■□□ 2.57
IGHV3-19-201ENST00000521488 NUTM2AQ8IVF1 878 aaPredicted RBP31.11■■■□□ 2.57
IGHV3-19-201ENST00000521488 TRPM3Q9HCF6 1732 aaPredicted RBP31.1■■■□□ 2.57
IGHV3-19-201ENST00000521488 SBNO2Q9Y2G9 1366 aa31.1■■■□□ 2.57
IGHV3-19-201ENST00000521488 SPATA31A3Q5VYP0 1347 aa31.1■■■□□ 2.57
IGHV3-19-201ENST00000521488 SRPK2P78362 688 aaKnown RBP31.09■■■□□ 2.57
IGHV3-19-201ENST00000521488 EVC2Q86UK5 1308 aa31.08■■■□□ 2.57
IGHV3-19-201ENST00000521488 CCDC61Q9Y6R9 512 aa31.08■■■□□ 2.57
IGHV3-19-201ENST00000521488 NGDNQ8NEJ9 315 aaKnown RBP31.06■■■□□ 2.56
IGHV3-19-201ENST00000521488 RGS17Q9UGC6 210 aaPredicted RBP31.05■■■□□ 2.56
IGHV3-19-201ENST00000521488 CABP2Q9NPB3 220 aa31.04■■■□□ 2.56
IGHV3-19-201ENST00000521488 POLR3AO14802 1390 aaPredicted RBP31.04■■■□□ 2.56
IGHV3-19-201ENST00000521488 ARHGEF10O15013 1369 aa31.04■■■□□ 2.56
IGHV3-19-201ENST00000521488 ILDR2Q71H61 639 aa31.03■■■□□ 2.56
IGHV3-19-201ENST00000521488 PPIP5K1Q6PFW1 1433 aa31.03■■■□□ 2.56
IGHV3-19-201ENST00000521488 ALS2Q96Q42 1657 aa31.03■■■□□ 2.56
IGHV3-19-201ENST00000521488 PLEKHG3A1L390 1219 aa31.01■■■□□ 2.55
IGHV3-19-201ENST00000521488 MARF1Q9Y4F3 1742 aaKnown RBP31■■■□□ 2.55
IGHV3-19-201ENST00000521488 ABCA3Q99758 1704 aa30.98■■■□□ 2.55
IGHV3-19-201ENST00000521488 ACEP12821 1306 aa30.98■■■□□ 2.55
IGHV3-19-201ENST00000521488 ADAMTS2O95450 1211 aa30.96■■■□□ 2.55
IGHV3-19-201ENST00000521488 ATAD2Q6PL18 1390 aa30.95■■■□□ 2.55
IGHV3-19-201ENST00000521488 LMOD2Q6P5Q4 547 aa30.95■■■□□ 2.55
IGHV3-19-201ENST00000521488 C8orf37Q96NL8 207 aa30.94■■■□□ 2.54
IGHV3-19-201ENST00000521488 USP47Q96K76 1375 aa30.93■■■□□ 2.54
IGHV3-19-201ENST00000521488 ZNF772Q68DY9 489 aaPredicted RBP30.93■■■□□ 2.54
IGHV3-19-201ENST00000521488 AFF2P51816 1311 aa30.92■■■□□ 2.54
IGHV3-19-201ENST00000521488 POTEAQ6S8J7 498 aa30.91■■■□□ 2.54
IGHV3-19-201ENST00000521488 ST20-MTHFSA0A0A6YYL1 179 aa30.9■■■□□ 2.54
IGHV3-19-201ENST00000521488 PAK3O75914 559 aaPredicted RBP30.9■■■□□ 2.54
IGHV3-19-201ENST00000521488 CABP1Q9NZU7 370 aa30.9■■■□□ 2.54
IGHV3-19-201ENST00000521488 CRYBG1Q9Y4K1 1723 aa30.9■■■□□ 2.54
IGHV3-19-201ENST00000521488 TESK2Q96S53 571 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms